BLASTX nr result

ID: Bupleurum21_contig00009064 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00009064
         (478 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522615.1| pentatricopeptide repeat-containing protein,...   156   1e-36
ref|XP_003531533.1| PREDICTED: pentatricopeptide repeat-containi...   154   5e-36
ref|XP_002323959.1| predicted protein [Populus trichocarpa] gi|2...   154   5e-36
ref|XP_004136896.1| PREDICTED: pentatricopeptide repeat-containi...   152   2e-35
ref|XP_003545705.1| PREDICTED: pentatricopeptide repeat-containi...   148   4e-34

>ref|XP_002522615.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223538091|gb|EEF39702.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 426

 Score =  156 bits (395), Expect = 1e-36
 Identities = 76/110 (69%), Positives = 90/110 (81%)
 Frame = -3

Query: 476 ESEKGITQREWITYDFLIILYGGLRNKDRLDQIWKSLRMTKQKMTSRNYLCILSSYLMLG 297
           E+EK ITQREWITYDFLIILY GLR+KD++DQIWKSLRMTKQKMT+RN++CILSSY+MLG
Sbjct: 307 EAEKSITQREWITYDFLIILYAGLRDKDKVDQIWKSLRMTKQKMTNRNFVCILSSYMMLG 366

Query: 296 NLKEVEEVIDQWKLSATTEYHDSTCRKLSKAFAELGLQEKAATFSMLLTE 147
           +LKE  EV+DQWK S TT++  S C +L  AF+  GL E A  F MLL E
Sbjct: 367 HLKEAGEVLDQWKKSTTTDFDLSACSRLLDAFSGSGLTEIANDFHMLLIE 416


>ref|XP_003531533.1| PREDICTED: pentatricopeptide repeat-containing protein At5g09450,
           mitochondrial-like [Glycine max]
          Length = 395

 Score =  154 bits (390), Expect = 5e-36
 Identities = 74/110 (67%), Positives = 89/110 (80%)
 Frame = -3

Query: 476 ESEKGITQREWITYDFLIILYGGLRNKDRLDQIWKSLRMTKQKMTSRNYLCILSSYLMLG 297
           E+EK ITQR+WITYDFLIILYGGL +KD+LDQIW SLRMTKQKM SRNY+CI+SSYLMLG
Sbjct: 278 ETEKRITQRQWITYDFLIILYGGLGSKDKLDQIWNSLRMTKQKMISRNYICIISSYLMLG 337

Query: 296 NLKEVEEVIDQWKLSATTEYHDSTCRKLSKAFAELGLQEKAATFSMLLTE 147
           + KEV EVIDQWK S TT++    C+K+  AF ++GL E A   +M+L E
Sbjct: 338 HTKEVGEVIDQWKQSTTTDFDMLACKKIMVAFRDMGLAEIANNLNMILIE 387


>ref|XP_002323959.1| predicted protein [Populus trichocarpa] gi|222866961|gb|EEF04092.1|
           predicted protein [Populus trichocarpa]
          Length = 355

 Score =  154 bits (390), Expect = 5e-36
 Identities = 75/110 (68%), Positives = 88/110 (80%)
 Frame = -3

Query: 476 ESEKGITQREWITYDFLIILYGGLRNKDRLDQIWKSLRMTKQKMTSRNYLCILSSYLMLG 297
           E+EK ITQREWITYDFL+ILY GL  KD++DQIWKSLRMT QKMTSRN++CILSSYLMLG
Sbjct: 243 EAEKKITQREWITYDFLVILYAGLGKKDKIDQIWKSLRMTNQKMTSRNFVCILSSYLMLG 302

Query: 296 NLKEVEEVIDQWKLSATTEYHDSTCRKLSKAFAELGLQEKAATFSMLLTE 147
           +LKEV E++DQWK S TT++  S C +L  A + LGL E A  F MLL E
Sbjct: 303 HLKEVGEIVDQWKQSTTTDFDISACNRLLDAISCLGLTEIANNFHMLLIE 352


>ref|XP_004136896.1| PREDICTED: pentatricopeptide repeat-containing protein At5g09450,
           mitochondrial-like [Cucumis sativus]
           gi|449478839|ref|XP_004155431.1| PREDICTED:
           pentatricopeptide repeat-containing protein At5g09450,
           mitochondrial-like [Cucumis sativus]
          Length = 406

 Score =  152 bits (385), Expect = 2e-35
 Identities = 73/110 (66%), Positives = 88/110 (80%)
 Frame = -3

Query: 476 ESEKGITQREWITYDFLIILYGGLRNKDRLDQIWKSLRMTKQKMTSRNYLCILSSYLMLG 297
           ES  GI+QREWITYD LIILY GL NKD++DQIW+SLRMTKQKMTSRNY+CI+S YLML 
Sbjct: 289 ESVSGISQREWITYDLLIILYAGLGNKDKIDQIWRSLRMTKQKMTSRNYICIVSCYLMLD 348

Query: 296 NLKEVEEVIDQWKLSATTEYHDSTCRKLSKAFAELGLQEKAATFSMLLTE 147
           +LKE+ EVIDQWK S TT++  S+C +L  AF E GL EKA +F  +L +
Sbjct: 349 DLKEIGEVIDQWKQSTTTDFDISSCNRLVNAFIEAGLHEKANSFVNVLIQ 398


>ref|XP_003545705.1| PREDICTED: pentatricopeptide repeat-containing protein At5g09450,
           mitochondrial-like [Glycine max]
          Length = 399

 Score =  148 bits (374), Expect = 4e-34
 Identities = 72/110 (65%), Positives = 87/110 (79%)
 Frame = -3

Query: 476 ESEKGITQREWITYDFLIILYGGLRNKDRLDQIWKSLRMTKQKMTSRNYLCILSSYLMLG 297
           E+EK ITQR+WITYDFLIILYGGL +KD+LDQIW SL MTKQKM SRNY+CI+SSYLMLG
Sbjct: 282 ETEKRITQRQWITYDFLIILYGGLGSKDKLDQIWNSLGMTKQKMISRNYMCIISSYLMLG 341

Query: 296 NLKEVEEVIDQWKLSATTEYHDSTCRKLSKAFAELGLQEKAATFSMLLTE 147
             KEV EVIDQWK S TT++    C+K+  AF ++GL E A   +++L E
Sbjct: 342 LTKEVGEVIDQWKQSTTTDFDMLACKKILVAFRDIGLAEIANNLNVILIE 391


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