BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00009062
         (354 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN77449.1| hypothetical protein VITISV_016970 [Vitis vinifera]   135   5e-30
gb|ABN08038.1| RNA-directed DNA polymerase (Reverse transcriptas...   129   3e-28
gb|ABD33126.2| RNA-directed DNA polymerase (Reverse transcriptas...   122   4e-26
emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulga...   120   2e-25
gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-...   119   3e-25

>emb|CAN77449.1| hypothetical protein VITISV_016970 [Vitis vinifera]
          Length = 517

 Score =  135 bits (339), Expect = 5e-30
 Identities = 56/115 (48%), Positives = 85/115 (73%)
 Frame = -2

Query: 353 KSVVFGYIKDKLQERLQGWDKKNLSRAGKEILIKGSAQTLSNYTMNVFLIPVNICKDLER 174
           K VVFG+++D+L  RLQGW  K LS+AGK+ILIK   Q + +Y M+ FL+P+++ ++L++
Sbjct: 162 KRVVFGFLRDRLWRRLQGWQSKLLSQAGKKILIKVVGQAIPSYCMSTFLLPISLSEELQK 221

Query: 173 SMCRYWWRSKSSSQKSIHWMSWERMSARKGVGGMGFRNMRDLNIALLGKQAWRLL 9
            M  +WW  KS   + I+W+SW+++  RK  GG+GFRN+RD N+A+LGKQ W L+
Sbjct: 222 MMNSFWWGPKSDGGRRINWLSWDKLCLRKEEGGLGFRNLRDFNLAMLGKQGWNLI 276


>gb|ABN08038.1| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 573

 Score =  129 bits (323), Expect = 3e-28
 Identities = 51/116 (43%), Positives = 84/116 (72%)
 Frame = -2

Query: 353 KSVVFGYIKDKLQERLQGWDKKNLSRAGKEILIKGSAQTLSNYTMNVFLIPVNICKDLER 174
           K+ +F Y+KD++ ++ Q W  ++LSRA KE+LIK  AQ + +Y M  FLIP ++C++LER
Sbjct: 292 KNAIFSYLKDRIWKKCQSWSVRSLSRADKEVLIKSVAQAIPSYCMGAFLIPASLCEELER 351

Query: 173 SMCRYWWRSKSSSQKSIHWMSWERMSARKGVGGMGFRNMRDLNIALLGKQAWRLLA 6
            M  ++W SK + ++ I+WM W+ ++  K +GG+GFRN+   N+++LGKQ W+LL+
Sbjct: 352 MMNSFYWGSKKNGRRGINWMRWDFLTLHKSLGGLGFRNLEAFNLSMLGKQGWKLLS 407


>gb|ABD33126.2| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 653

 Score =  122 bits (305), Expect = 4e-26
 Identities = 53/117 (45%), Positives = 78/117 (66%)
 Frame = -2

Query: 353 KSVVFGYIKDKLQERLQGWDKKNLSRAGKEILIKGSAQTLSNYTMNVFLIPVNICKDLER 174
           K  +F YIKD++  R+ G   K LS+AGKE+LIK  AQ + +Y M+VFL+P +I  D+E+
Sbjct: 353 KKSIFNYIKDRIWNRISGLSSKMLSQAGKEVLIKSVAQAIPSYCMSVFLLPHSIADDIEK 412

Query: 173 SMCRYWWRSKSSSQKSIHWMSWERMSARKGVGGMGFRNMRDLNIALLGKQAWRLLAH 3
            +  +WW  K+  +  I WMSWER++ RK  GGMGFR++   ++A+ GKQ W  L +
Sbjct: 413 MLNSFWWGMKNEGRGGIRWMSWERLTMRKEWGGMGFRHIHGFDLAMSGKQCWNFLTN 469


>emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1357

 Score =  120 bits (300), Expect = 2e-25
 Identities = 54/115 (46%), Positives = 79/115 (68%)
 Frame = -2

Query: 353  KSVVFGYIKDKLQERLQGWDKKNLSRAGKEILIKGSAQTLSNYTMNVFLIPVNICKDLER 174
            K V+F  + D++ ++L+GW +K LSRAGKE+LIK   Q L  Y M V+ +PV + +++  
Sbjct: 768  KKVLFRELLDRMWKKLRGWKEKLLSRAGKEVLIKAVIQALPTYLMGVYKLPVAVIQEIHS 827

Query: 173  SMCRYWWRSKSSSQKSIHWMSWERMSARKGVGGMGFRNMRDLNIALLGKQAWRLL 9
            +M R+WW  K   +K +HW+SWE+M   K +GGMGF+++   N ALLGKQ WRLL
Sbjct: 828  AMARFWWGGKGDERK-MHWLSWEKMCKPKCMGGMGFKDLAVFNDALLGKQVWRLL 881


>gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-20266 [Arabidopsis thaliana]
          Length = 1142

 Score =  119 bits (297), Expect = 3e-25
 Identities = 51/115 (44%), Positives = 76/115 (66%)
 Frame = -2

Query: 353 KSVVFGYIKDKLQERLQGWDKKNLSRAGKEILIKGSAQTLSNYTMNVFLIPVNICKDLER 174
           K+ VF +++D+LQ R+ GW  K LS+ GKE++IK  A TL  Y M+ F +P  I   L  
Sbjct: 545 KTKVFSFVRDRLQSRINGWSAKFLSKGGKEVMIKSVAATLPRYVMSCFRLPKAITSKLTS 604

Query: 173 SMCRYWWRSKSSSQKSIHWMSWERMSARKGVGGMGFRNMRDLNIALLGKQAWRLL 9
           ++ ++WW S   S + +HWM+W+++ + K  GG+GFRN+ D N ALL KQ WRL+
Sbjct: 605 AVAKFWWSSNGDS-RGMHWMAWDKLCSSKSDGGLGFRNVDDFNSALLAKQLWRLI 658