BLASTX nr result

ID: Bupleurum21_contig00009048 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00009048
         (1001 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326733.1| predicted protein [Populus trichocarpa] gi|2...   399   e-109
ref|XP_002304343.1| predicted protein [Populus trichocarpa] gi|1...   397   e-108
ref|XP_002278896.1| PREDICTED: uncharacterized membrane protein ...   397   e-108
ref|XP_002527655.1| conserved hypothetical protein [Ricinus comm...   391   e-106
ref|NP_567541.1| SNARE associated Golgi protein [Arabidopsis tha...   389   e-106

>ref|XP_002326733.1| predicted protein [Populus trichocarpa] gi|222834055|gb|EEE72532.1|
           predicted protein [Populus trichocarpa]
          Length = 249

 Score =  399 bits (1025), Expect = e-109
 Identities = 199/240 (82%), Positives = 223/240 (92%)
 Frame = +1

Query: 100 KFPLSFWEMAAATGVVLAFILGLSCVYLTMPVSDYTFLKLPRTLHDLQILRDDLETYTND 279
           +FPLS WE+AAA+ V+L F+LGL  VYLTMP SDY+FLKLPRTL DLQILRD LETYT+D
Sbjct: 11  RFPLSSWEVAAASSVLLGFVLGLLGVYLTMPESDYSFLKLPRTLEDLQILRDHLETYTSD 70

Query: 280 YTVQVLTGYCMVYIFMQTFMIPGTVFMSLLAGSLFGVFKGVALVVFNATAGASSCYFLSK 459
           YT QVL GYC+VYIFMQTFMIPGTVFMSLLAG+LFGVFKGVALVVF ATAGASSCYFLSK
Sbjct: 71  YTAQVLVGYCVVYIFMQTFMIPGTVFMSLLAGALFGVFKGVALVVFTATAGASSCYFLSK 130

Query: 460 LIGRPLLFSLWPDKLSFFQEQVAKRHDGLLNYMLFLRVTPTLPNTFINLASPIVGIPFHI 639
           LIGRPL+FSLWPDKLSFFQEQVA+R  GLLNYMLFLR+TPTLPNTFIN+ASPIV +P+HI
Sbjct: 131 LIGRPLVFSLWPDKLSFFQEQVARRRGGLLNYMLFLRLTPTLPNTFINVASPIVDVPYHI 190

Query: 640 FFFATLIGLIPAAFVTVRAGIALGELRSMGDLYDTHSIATLFLIGIVSVTPTLMNNKSKS 819
           FF ATLIGL+PAA+VTV+AGIALGEL+S+GDLYD +SIATLFLIGIVS+TPTL+ +KSKS
Sbjct: 191 FFLATLIGLVPAAYVTVKAGIALGELQSIGDLYDFNSIATLFLIGIVSITPTLI-SKSKS 249


>ref|XP_002304343.1| predicted protein [Populus trichocarpa] gi|118488236|gb|ABK95937.1|
           unknown [Populus trichocarpa]
           gi|222841775|gb|EEE79322.1| predicted protein [Populus
           trichocarpa]
          Length = 249

 Score =  397 bits (1019), Expect = e-108
 Identities = 199/240 (82%), Positives = 220/240 (91%)
 Frame = +1

Query: 100 KFPLSFWEMAAATGVVLAFILGLSCVYLTMPVSDYTFLKLPRTLHDLQILRDDLETYTND 279
           +FPLSFWE+ AA+ VVL F+L L  VYLTMP SDY+FLKLPRTL DLQILRD LETYT D
Sbjct: 11  RFPLSFWEVGAASSVVLGFVLCLLGVYLTMPASDYSFLKLPRTLEDLQILRDHLETYTID 70

Query: 280 YTVQVLTGYCMVYIFMQTFMIPGTVFMSLLAGSLFGVFKGVALVVFNATAGASSCYFLSK 459
           YT QVL GYC+VYIFMQTFMIPGTVFMSLLAG+LFGV KGVALVVF ATAGASSCYFLSK
Sbjct: 71  YTAQVLVGYCVVYIFMQTFMIPGTVFMSLLAGALFGVLKGVALVVFTATAGASSCYFLSK 130

Query: 460 LIGRPLLFSLWPDKLSFFQEQVAKRHDGLLNYMLFLRVTPTLPNTFINLASPIVGIPFHI 639
           LIGRPL+FSLWPDKLSFFQEQVA+R  GLLNYMLFLR+TPTLPNTFIN+ASPIV +P+HI
Sbjct: 131 LIGRPLVFSLWPDKLSFFQEQVARRRGGLLNYMLFLRLTPTLPNTFINVASPIVDVPYHI 190

Query: 640 FFFATLIGLIPAAFVTVRAGIALGELRSMGDLYDTHSIATLFLIGIVSVTPTLMNNKSKS 819
           FF ATLIGLIPAA+VTV+AGIALGEL+S+GDLYD +SIATLFLIGI+S+TPTLM +KSKS
Sbjct: 191 FFLATLIGLIPAAYVTVKAGIALGELQSIGDLYDFNSIATLFLIGIISITPTLM-SKSKS 249


>ref|XP_002278896.1| PREDICTED: uncharacterized membrane protein At4g09580 [Vitis
           vinifera]
          Length = 254

 Score =  397 bits (1019), Expect = e-108
 Identities = 198/239 (82%), Positives = 218/239 (91%), Gaps = 1/239 (0%)
 Frame = +1

Query: 100 KFPLSFWEMAAATGVVLAFILGLSCVYLTMPVSDYTFLKLPRTLHDLQILRDDLETYTND 279
           +FPL+FWE+  A+ VV AF+LGL+CVYLTMP SDY+FLKLPR+L D+QILRD LE YT+D
Sbjct: 16  RFPLTFWEVTGASAVVGAFVLGLACVYLTMPASDYSFLKLPRSLEDIQILRDHLEDYTSD 75

Query: 280 YTVQVLTGYCMVYIFMQTFMIPGTVFMSLLAGSLFGVFKGVALVVFNATAGASSCYFLSK 459
           YTVQVL GYCMVYIFMQTFMIPGTVFMSLLAGSLFGVFKGVALVVF ATAGASSCYFLSK
Sbjct: 76  YTVQVLVGYCMVYIFMQTFMIPGTVFMSLLAGSLFGVFKGVALVVFTATAGASSCYFLSK 135

Query: 460 LIGRPLLFSLWPDKLSFFQEQVAKRHDGLLNYMLFLRVTPTLPNTFINLASPIVGIPFHI 639
           LIGRPL+  LWPDKLSFFQ QVAKR + LLNYMLFLRVTPTLPNTFIN+ASP+V +P+HI
Sbjct: 136 LIGRPLVSFLWPDKLSFFQAQVAKRRERLLNYMLFLRVTPTLPNTFINVASPMVDVPYHI 195

Query: 640 FFFATLIGLIPAAFVTVRAGIALGELRSMGDLYDTHSIATLFLIGIVSVTPTLMN-NKS 813
           FF AT IGLIPAA+VTVRAGIALGELRS+GDLYD  SIATLFLIG+VSVTPTLM+ NKS
Sbjct: 196 FFLATFIGLIPAAYVTVRAGIALGELRSVGDLYDFQSIATLFLIGVVSVTPTLMSKNKS 254


>ref|XP_002527655.1| conserved hypothetical protein [Ricinus communis]
           gi|223532960|gb|EEF34726.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 263

 Score =  391 bits (1005), Expect = e-106
 Identities = 193/239 (80%), Positives = 218/239 (91%)
 Frame = +1

Query: 103 FPLSFWEMAAATGVVLAFILGLSCVYLTMPVSDYTFLKLPRTLHDLQILRDDLETYTNDY 282
           FPLSFWE+  A  VV  F++GL  VYLTMP SDY+FLKLPR+L DLQILRD LETYT+DY
Sbjct: 26  FPLSFWEVTVAATVVFGFVVGLLGVYLTMPPSDYSFLKLPRSLQDLQILRDHLETYTSDY 85

Query: 283 TVQVLTGYCMVYIFMQTFMIPGTVFMSLLAGSLFGVFKGVALVVFNATAGASSCYFLSKL 462
           T QVL GYC+VYIFMQTFMIPGTVFMSLLAG+LFGVFKGVALVVF ATAGASSCYFLSK+
Sbjct: 86  TAQVLIGYCVVYIFMQTFMIPGTVFMSLLAGALFGVFKGVALVVFTATAGASSCYFLSKV 145

Query: 463 IGRPLLFSLWPDKLSFFQEQVAKRHDGLLNYMLFLRVTPTLPNTFINLASPIVGIPFHIF 642
           IGRPL+FSLWPDKLSFFQEQVA+R D LLNYMLFLR+TPTLPNTFIN+ASPIV +P+HIF
Sbjct: 146 IGRPLVFSLWPDKLSFFQEQVARRKDSLLNYMLFLRLTPTLPNTFINVASPIVDVPYHIF 205

Query: 643 FFATLIGLIPAAFVTVRAGIALGELRSMGDLYDTHSIATLFLIGIVSVTPTLMNNKSKS 819
           F AT IGLIPAA+VTV+AGIALGEL+S+GDLYD +S+ATLFLIG+VS+TPTLM +KSK+
Sbjct: 206 FLATFIGLIPAAYVTVKAGIALGELQSLGDLYDFNSVATLFLIGVVSITPTLM-SKSKT 263


>ref|NP_567541.1| SNARE associated Golgi protein [Arabidopsis thaliana]
           gi|2245138|emb|CAB10559.1| hypothetical protein
           [Arabidopsis thaliana] gi|7268532|emb|CAB78782.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|51968514|dbj|BAD42949.1| unknown protein [Arabidopsis
           thaliana] gi|62320047|dbj|BAD94198.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|332658551|gb|AEE83951.1| SNARE associated Golgi
           protein [Arabidopsis thaliana]
          Length = 264

 Score =  389 bits (1000), Expect = e-106
 Identities = 192/241 (79%), Positives = 216/241 (89%)
 Frame = +1

Query: 88  LTSPKFPLSFWEMAAATGVVLAFILGLSCVYLTMPVSDYTFLKLPRTLHDLQILRDDLET 267
           L +P + LSFWE+ AA+GVVL FILGL CVYLTMP SDY+FLKLPR L DLQILRD+LE 
Sbjct: 22  LPTPIYSLSFWEVTAASGVVLGFILGLVCVYLTMPQSDYSFLKLPRNLEDLQILRDNLEI 81

Query: 268 YTNDYTVQVLTGYCMVYIFMQTFMIPGTVFMSLLAGSLFGVFKGVALVVFNATAGASSCY 447
           YT+DYTVQVL GYC+VY+FMQTFMIPGTVFMSLLAG+LFGV KG+ALVV  ATAGASSCY
Sbjct: 82  YTSDYTVQVLVGYCLVYVFMQTFMIPGTVFMSLLAGALFGVVKGMALVVSTATAGASSCY 141

Query: 448 FLSKLIGRPLLFSLWPDKLSFFQEQVAKRHDGLLNYMLFLRVTPTLPNTFINLASPIVGI 627
           FLSKLIGRPLLFSLWPDKL FFQ+QVA+R D LLNYMLFLR+TPTLPNTFIN+ASPIV +
Sbjct: 142 FLSKLIGRPLLFSLWPDKLVFFQDQVARRKDRLLNYMLFLRLTPTLPNTFINVASPIVDV 201

Query: 628 PFHIFFFATLIGLIPAAFVTVRAGIALGELRSMGDLYDTHSIATLFLIGIVSVTPTLMNN 807
           P+HIFF AT IGLIPAAFVTVRAG+ALGEL+S+GDLYD  S+ATL LIG++SVTPTL+  
Sbjct: 202 PYHIFFLATFIGLIPAAFVTVRAGLALGELKSLGDLYDFSSMATLCLIGVLSVTPTLIGK 261

Query: 808 K 810
           K
Sbjct: 262 K 262


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