BLASTX nr result

ID: Bupleurum21_contig00009029 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00009029
         (1401 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003550033.1| PREDICTED: nuA4 complex subunit EAF3 homolog...   400   e-109
ref|XP_002524929.1| chromatin binding protein, putative [Ricinus...   397   e-108
ref|XP_003524665.1| PREDICTED: nuA4 complex subunit EAF3 homolog...   395   e-107
ref|XP_002283618.1| PREDICTED: mortality factor 4-like protein 1...   377   e-102
ref|XP_002310115.1| predicted protein [Populus trichocarpa] gi|2...   376   e-102

>ref|XP_003550033.1| PREDICTED: nuA4 complex subunit EAF3 homolog [Glycine max]
          Length = 319

 Score =  400 bits (1028), Expect = e-109
 Identities = 196/306 (64%), Positives = 236/306 (77%)
 Frame = +3

Query: 87   MGGSLKXXXXXXXXXXLNGDLPEPSSCLFSEGEKVLAYHGPRIYEAKVQKTEIRKKEWRY 266
            MG S K            GD+P  +S ++SEGEKVLAYHGPRIYEAKVQKTEIRK EW+Y
Sbjct: 1    MGNSSKDNDSATSADASAGDIPPSNSGVYSEGEKVLAYHGPRIYEAKVQKTEIRKSEWKY 60

Query: 267  FVHYLGWNKNWDEWVAKERLMKYTEENILKQQALDKKQGADKNQKSARAGNTRPKVSTDA 446
            FVHYLGW+KNWDEWV +ERLMK+TEEN+LKQQALDKKQ  DKN KS R+   + K+STDA
Sbjct: 61   FVHYLGWSKNWDEWVGEERLMKHTEENVLKQQALDKKQNVDKNVKSGRSSQGKAKISTDA 120

Query: 447  KLEKEDSRNNGTKGXXXXXXXXXXXXXXXXXXXLIKIQIPSTLKKLLVDDWEAITQQDKL 626
            K++KED +NN +KG                   L+KIQIP+TLKK LVDDW+++TQQDKL
Sbjct: 121  KMDKEDVKNNVSKGKKRKHDAGVEKGSGTVEK-LVKIQIPATLKKQLVDDWDSVTQQDKL 179

Query: 627  VKLPRSPNVDTILSNYMEYKSSKDGMTTDQAQEIMNGLRCYFNKVLPVILLYKKERQQYI 806
            VKLPRSP VD I++ Y+EYKS KDG+  D   EI+ G+RCYF+K LP++LLYKKER+QY 
Sbjct: 180  VKLPRSPTVDEIMTKYLEYKSKKDGVAPDSIGEILKGIRCYFDKALPMMLLYKKERKQYN 239

Query: 807  EAVVDGLPPSAIYGAEHLLRLFVKLPELLAIIKMEEEALSRLQQKLNYFLKFMQRNQSTF 986
            +++VD + PS IYGAEHLLRLFVKLPELLA + +EEE L+RLQQKL  FLKF+Q+NQSTF
Sbjct: 240  DSIVDNVSPSTIYGAEHLLRLFVKLPELLAYVTIEEETLNRLQQKLLDFLKFLQKNQSTF 299

Query: 987  FLSNYD 1004
            FLS YD
Sbjct: 300  FLSAYD 305


>ref|XP_002524929.1| chromatin binding protein, putative [Ricinus communis]
            gi|223535764|gb|EEF37426.1| chromatin binding protein,
            putative [Ricinus communis]
          Length = 318

 Score =  397 bits (1019), Expect = e-108
 Identities = 192/289 (66%), Positives = 229/289 (79%)
 Frame = +3

Query: 138  NGDLPEPSSCLFSEGEKVLAYHGPRIYEAKVQKTEIRKKEWRYFVHYLGWNKNWDEWVAK 317
            +GD P  +S +FSEGE+VLAYHGPRIYEAKVQK E+RKKEWRYFVHYLGWNKNWDEW+  
Sbjct: 17   SGDAPPSNSGIFSEGERVLAYHGPRIYEAKVQKAELRKKEWRYFVHYLGWNKNWDEWIGT 76

Query: 318  ERLMKYTEENILKQQALDKKQGADKNQKSARAGNTRPKVSTDAKLEKEDSRNNGTKGXXX 497
            +RL+K+TEEN++KQQAL+KKQG DK+ K  R+  T+PK STDAK++KED+++N  KG   
Sbjct: 77   DRLLKHTEENVVKQQALEKKQGVDKSSKLGRSAQTKPKTSTDAKVDKEDAKSNVAKGKKR 136

Query: 498  XXXXXXXXXXXXXXXXLIKIQIPSTLKKLLVDDWEAITQQDKLVKLPRSPNVDTILSNYM 677
                            L+KIQIPSTLKK LVDDWE + QQDKLV+LPRSPNVD IL+ Y+
Sbjct: 137  KSDSGIEKDNLSAEK-LVKIQIPSTLKKQLVDDWEFVIQQDKLVRLPRSPNVDDILTKYL 195

Query: 678  EYKSSKDGMTTDQAQEIMNGLRCYFNKVLPVILLYKKERQQYIEAVVDGLPPSAIYGAEH 857
            EY+S KDGM TD   EI+ G+RCYF+K LPV+LLYKKER QY +AV +   PS IYGAEH
Sbjct: 196  EYRSKKDGMMTDSIGEILKGIRCYFDKALPVMLLYKKERHQYDDAVENDASPSTIYGAEH 255

Query: 858  LLRLFVKLPELLAIIKMEEEALSRLQQKLNYFLKFMQRNQSTFFLSNYD 1004
            LLRLFVKLPELLA + +EEE L+RLQQKL  FLKF+Q+NQSTFFLS YD
Sbjct: 256  LLRLFVKLPELLAYVNIEEETLARLQQKLLDFLKFLQKNQSTFFLSAYD 304


>ref|XP_003524665.1| PREDICTED: nuA4 complex subunit EAF3 homolog [Glycine max]
          Length = 319

 Score =  395 bits (1015), Expect = e-107
 Identities = 195/306 (63%), Positives = 233/306 (76%)
 Frame = +3

Query: 87   MGGSLKXXXXXXXXXXLNGDLPEPSSCLFSEGEKVLAYHGPRIYEAKVQKTEIRKKEWRY 266
            MG S K            GD+   +S ++SEGEKVLAYHGPRIYEAKVQK EIRK EW+Y
Sbjct: 1    MGNSSKDNDSATSADASAGDVQPSNSAVYSEGEKVLAYHGPRIYEAKVQKAEIRKSEWKY 60

Query: 267  FVHYLGWNKNWDEWVAKERLMKYTEENILKQQALDKKQGADKNQKSARAGNTRPKVSTDA 446
            FVHYLGW+KNWDEWV +ERLMK+TEEN++KQQALDKKQ  DKN KS R+   + K STDA
Sbjct: 61   FVHYLGWSKNWDEWVGEERLMKHTEENVMKQQALDKKQNVDKNVKSGRSSQGKAKSSTDA 120

Query: 447  KLEKEDSRNNGTKGXXXXXXXXXXXXXXXXXXXLIKIQIPSTLKKLLVDDWEAITQQDKL 626
            K++KED +NN +KG                   L+KIQIP+TLKK LVDDW+++TQQDKL
Sbjct: 121  KMDKEDVKNNVSKGKKRKHDAGVEKGSGTVEK-LVKIQIPATLKKQLVDDWDSVTQQDKL 179

Query: 627  VKLPRSPNVDTILSNYMEYKSSKDGMTTDQAQEIMNGLRCYFNKVLPVILLYKKERQQYI 806
            VKLPRSP VD IL+ Y+EYKS KDG+  D   EI+ G+RCYF+K LP++LLYKKER+QY 
Sbjct: 180  VKLPRSPTVDEILTKYLEYKSKKDGIAPDSIGEILKGIRCYFDKALPMMLLYKKERKQYN 239

Query: 807  EAVVDGLPPSAIYGAEHLLRLFVKLPELLAIIKMEEEALSRLQQKLNYFLKFMQRNQSTF 986
            +A+VD + PS IYGAEHLLRLFVKLPELLA + +EEE L+RLQQKL  FLKF+Q+NQSTF
Sbjct: 240  DAIVDNVSPSTIYGAEHLLRLFVKLPELLAYVTIEEETLNRLQQKLLDFLKFLQKNQSTF 299

Query: 987  FLSNYD 1004
            FLS YD
Sbjct: 300  FLSAYD 305


>ref|XP_002283618.1| PREDICTED: mortality factor 4-like protein 1 [Vitis vinifera]
            gi|296087392|emb|CBI33766.3| unnamed protein product
            [Vitis vinifera]
          Length = 321

 Score =  377 bits (968), Expect = e-102
 Identities = 189/289 (65%), Positives = 220/289 (76%), Gaps = 1/289 (0%)
 Frame = +3

Query: 141  GDLPEPSSCLFSEGEKVLAYHGPRIYEAKVQKTEIRKKEWRYFVHYLGWNKNWDEWVAKE 320
            GDLP  +S  FSEGEKVLAYHGPRIYEAKVQK E RKKEWRYFVHYLGWNKNWDEWV  +
Sbjct: 21   GDLPASNSGTFSEGEKVLAYHGPRIYEAKVQKAEFRKKEWRYFVHYLGWNKNWDEWVGMD 80

Query: 321  RLMKYTEENILKQQALDKKQGADKNQKSARAGNTRPKVSTDAKLEKEDSRNNGTKGXXXX 500
            RLMK+TEEN+LKQQALDKKQGA+KN KS R+   +PK STDAK+EKED ++   +G    
Sbjct: 81   RLMKHTEENVLKQQALDKKQGAEKNPKSGRSAQAKPKSSTDAKVEKEDLKSYVARG-KRR 139

Query: 501  XXXXXXXXXXXXXXXLIKIQIPSTLKKLLVDDWEAITQQDKLVKLPRSPNVDTILSNYME 680
                           L+KI IP+TLKK LVDDW+ +TQQDKLVKLPR PNVD IL  Y+E
Sbjct: 140  KSDSGIEKDNASTEKLVKIPIPATLKKQLVDDWDFVTQQDKLVKLPRIPNVDAILIKYLE 199

Query: 681  YKSSKDGMTTDQAQEIMNGLRCYFNKVLPVILLYKKERQQYIEAVV-DGLPPSAIYGAEH 857
            Y+  KDG  TD   EI+NGLR YF++ LP++LLYKKERQQ+ EA+    L PS +YGAEH
Sbjct: 200  YRIKKDGTMTDYVAEILNGLRSYFDRALPMMLLYKKERQQFQEAIYHPDLSPSTVYGAEH 259

Query: 858  LLRLFVKLPELLAIIKMEEEALSRLQQKLNYFLKFMQRNQSTFFLSNYD 1004
            LLRLFVKLPELLA + +EEE L  +QQK   FLKF+Q+NQSTFFLS Y+
Sbjct: 260  LLRLFVKLPELLACVNIEEETLIGMQQKFIDFLKFLQKNQSTFFLSAYE 308


>ref|XP_002310115.1| predicted protein [Populus trichocarpa] gi|222853018|gb|EEE90565.1|
            predicted protein [Populus trichocarpa]
          Length = 332

 Score =  376 bits (965), Expect = e-102
 Identities = 190/304 (62%), Positives = 223/304 (73%), Gaps = 15/304 (4%)
 Frame = +3

Query: 138  NGDLPEPSSCLFSEGEKVLAYHGPRIYEAK---------------VQKTEIRKKEWRYFV 272
            +GD    +S LFSEGE+VLAYHGPRIYEAK               VQK E+RKKEWRYFV
Sbjct: 17   SGDKTPSNSSLFSEGERVLAYHGPRIYEAKASLSIRSFLFYFFYFVQKAELRKKEWRYFV 76

Query: 273  HYLGWNKNWDEWVAKERLMKYTEENILKQQALDKKQGADKNQKSARAGNTRPKVSTDAKL 452
            HYLGWNKNWDEWV  +RLMK+T +N+LKQQAL+KKQG DK+ K  R+  T+PK STD+K+
Sbjct: 77   HYLGWNKNWDEWVGMDRLMKHTPDNVLKQQALEKKQGVDKSLKPGRSSQTKPKNSTDSKM 136

Query: 453  EKEDSRNNGTKGXXXXXXXXXXXXXXXXXXXLIKIQIPSTLKKLLVDDWEAITQQDKLVK 632
            +KED ++N  KG                   L+KIQIPSTLKK LVDDWE +TQQDK VK
Sbjct: 137  DKEDPKSNVAKGKKRKSDSGMEKDNLPVEK-LVKIQIPSTLKKQLVDDWEFVTQQDKFVK 195

Query: 633  LPRSPNVDTILSNYMEYKSSKDGMTTDQAQEIMNGLRCYFNKVLPVILLYKKERQQYIEA 812
            LPRSPNVD IL+ Y+EY S KDGM TD   EI+ G+RCYF+K LPV+LLYKKERQQY + 
Sbjct: 196  LPRSPNVDDILTKYLEYMSKKDGMITDSIGEILKGIRCYFDKALPVMLLYKKERQQYHDT 255

Query: 813  VVDGLPPSAIYGAEHLLRLFVKLPELLAIIKMEEEALSRLQQKLNYFLKFMQRNQSTFFL 992
            V   + PS IYGAEHLLRLFVKLPELLA + +EE+  +RLQQKL  FLKF+ +NQSTFFL
Sbjct: 256  VKIDVSPSTIYGAEHLLRLFVKLPELLAYVNIEEDTSTRLQQKLLDFLKFLHKNQSTFFL 315

Query: 993  SNYD 1004
            S YD
Sbjct: 316  SAYD 319


Top