BLASTX nr result

ID: Bupleurum21_contig00009026 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00009026
         (269 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002297801.1| predicted protein [Populus trichocarpa] gi|2...   118   6e-25
ref|XP_002273525.1| PREDICTED: UPF0326 protein At4g17486 [Vitis ...   118   6e-25
ref|XP_002887815.1| hypothetical protein ARALYDRAFT_477178 [Arab...   115   4e-24
ref|XP_002527317.1| conserved hypothetical protein [Ricinus comm...   115   4e-24
gb|AAF14657.1|AC011713_5 Contains similarity to gb|AF151904 CGI-...   114   6e-24

>ref|XP_002297801.1| predicted protein [Populus trichocarpa] gi|222845059|gb|EEE82606.1|
           predicted protein [Populus trichocarpa]
          Length = 219

 Score =  118 bits (295), Expect = 6e-25
 Identities = 51/68 (75%), Positives = 60/68 (88%)
 Frame = -1

Query: 212 CTRDPNWSKEGSFPVHLNVYDLTAMNGYAHWLGLGVYHSAVQVHGIEYAFGAHEFPTTGI 33
           C ++ + +  GS PV+LNVYDLT +NGYA+WLGLGVYHS VQVHG+EYAFGAHEFPTTGI
Sbjct: 3   CRKNLSCTDTGSVPVYLNVYDLTPINGYAYWLGLGVYHSGVQVHGVEYAFGAHEFPTTGI 62

Query: 32  FEGEPKKC 9
           FEGEPK+C
Sbjct: 63  FEGEPKQC 70


>ref|XP_002273525.1| PREDICTED: UPF0326 protein At4g17486 [Vitis vinifera]
           gi|297743608|emb|CBI36475.3| unnamed protein product
           [Vitis vinifera]
          Length = 229

 Score =  118 bits (295), Expect = 6e-25
 Identities = 51/70 (72%), Positives = 59/70 (84%)
 Frame = -1

Query: 215 LCTRDPNWSKEGSFPVHLNVYDLTAMNGYAHWLGLGVYHSAVQVHGIEYAFGAHEFPTTG 36
           LC +       GS PV+LNVYDLT +NGYA+WLGLGVYHS VQVHG+EYAFGAHE+PTTG
Sbjct: 2   LCRKSSTKKCRGSVPVYLNVYDLTPINGYAYWLGLGVYHSGVQVHGVEYAFGAHEYPTTG 61

Query: 35  IFEGEPKKCQ 6
           IFEGEPK+C+
Sbjct: 62  IFEGEPKQCE 71


>ref|XP_002887815.1| hypothetical protein ARALYDRAFT_477178 [Arabidopsis lyrata subsp.
           lyrata] gi|297333656|gb|EFH64074.1| hypothetical protein
           ARALYDRAFT_477178 [Arabidopsis lyrata subsp. lyrata]
          Length = 228

 Score =  115 bits (288), Expect = 4e-24
 Identities = 48/70 (68%), Positives = 61/70 (87%)
 Frame = -1

Query: 215 LCTRDPNWSKEGSFPVHLNVYDLTAMNGYAHWLGLGVYHSAVQVHGIEYAFGAHEFPTTG 36
           LC +  ++   G+ PV+LNVYDLT +NGYA+WLGLGVYHS V+VHGIEYAFGAHE+P+TG
Sbjct: 2   LCRKSSSFVDRGNVPVYLNVYDLTPINGYAYWLGLGVYHSGVEVHGIEYAFGAHEYPSTG 61

Query: 35  IFEGEPKKCQ 6
           IFEGEP++C+
Sbjct: 62  IFEGEPRQCE 71


>ref|XP_002527317.1| conserved hypothetical protein [Ricinus communis]
           gi|223533317|gb|EEF35069.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 227

 Score =  115 bits (288), Expect = 4e-24
 Identities = 49/59 (83%), Positives = 56/59 (94%)
 Frame = -1

Query: 182 GSFPVHLNVYDLTAMNGYAHWLGLGVYHSAVQVHGIEYAFGAHEFPTTGIFEGEPKKCQ 6
           GS PV+LNVYDLT +NGYA+WLGLGVYHS VQVHG+EYAFGAHE+PTTGIFEGEPK+C+
Sbjct: 15  GSVPVYLNVYDLTPINGYAYWLGLGVYHSGVQVHGVEYAFGAHEYPTTGIFEGEPKQCE 73


>gb|AAF14657.1|AC011713_5 Contains similarity to gb|AF151904 CGI-146 protein from Homo
           sapiens. EST gb|T44446 comes from this gene [Arabidopsis
           thaliana]
          Length = 231

 Score =  114 bits (286), Expect = 6e-24
 Identities = 48/70 (68%), Positives = 61/70 (87%)
 Frame = -1

Query: 215 LCTRDPNWSKEGSFPVHLNVYDLTAMNGYAHWLGLGVYHSAVQVHGIEYAFGAHEFPTTG 36
           LC ++ +    G+ PV+LNVYDLT +NGYA+WLGLGVYHS V+VHGIEYA+GAHE+P+TG
Sbjct: 2   LCRKNSSLVDRGNVPVYLNVYDLTPINGYAYWLGLGVYHSGVEVHGIEYAYGAHEYPSTG 61

Query: 35  IFEGEPKKCQ 6
           IFEGEPK+C+
Sbjct: 62  IFEGEPKQCE 71


Top