BLASTX nr result

ID: Bupleurum21_contig00009023 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00009023
         (443 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331674.1| f-box family protein [Populus trichocarpa] g...   137   7e-31
ref|XP_002318137.1| predicted protein [Populus trichocarpa] gi|2...   134   8e-30
ref|XP_002327664.1| predicted protein [Populus trichocarpa] gi|2...   134   1e-29
ref|XP_003553895.1| PREDICTED: F-box/kelch-repeat protein At3g06...    85   7e-15
gb|ACU18590.1| unknown [Glycine max]                                   83   2e-14

>ref|XP_002331674.1| f-box family protein [Populus trichocarpa]
           gi|222874093|gb|EEF11224.1| f-box family protein
           [Populus trichocarpa]
          Length = 441

 Score =  137 bits (346), Expect = 7e-31
 Identities = 67/150 (44%), Positives = 97/150 (64%), Gaps = 4/150 (2%)
 Frame = -2

Query: 442 NKCYIYVNGCCYWFGSFEYTSE---IIISFNMANDSFKEMDVPDYAQP-SYKRLAVYDDS 275
           NKCYI +NG  +W GS+E   +   +IISF+MA ++ +E+ +PD  +  + + LA Y DS
Sbjct: 248 NKCYICMNGVFFWLGSYEIFGDPEKVIISFDMATETCQEIQLPDCGKSHNCQCLATYQDS 307

Query: 274 LAFLSLHQTNKNFDIWTWSEGCWTKKFTVGPLPSVWVPIGHWMGNRLLLQLEDGKLVLFD 95
           LA L +H+  K   +WT +E CW K F++GPLP +  PIGHW  ++L+L  + G+L+L D
Sbjct: 308 LAILDVHE--KFLHMWTLNERCWVKNFSIGPLPEISYPIGHWKNSKLILVSDSGELILCD 365

Query: 94  PDTQETNDLAFQNTMMCQGVFAYMESLVSI 5
           P TQE + L     + C GVFAY ESLV +
Sbjct: 366 PSTQEISGLGLTRWVRCVGVFAYKESLVLV 395


>ref|XP_002318137.1| predicted protein [Populus trichocarpa] gi|222858810|gb|EEE96357.1|
           predicted protein [Populus trichocarpa]
          Length = 367

 Score =  134 bits (337), Expect = 8e-30
 Identities = 62/148 (41%), Positives = 90/148 (60%), Gaps = 1/148 (0%)
 Frame = -2

Query: 442 NKCYIYVNGCCYWFGSFEYTSEIIISFNMANDSFKEMDVPDYAQPSYK-RLAVYDDSLAF 266
           N CY  V+G  YW         +I+SFNMA D+F+E+  PDY +P+Y  RL +Y DS+AF
Sbjct: 204 NYCYTNVDGVYYWQAGHGVHMNVILSFNMATDAFQEIQEPDYDKPAYSTRLILYHDSIAF 263

Query: 265 LSLHQTNKNFDIWTWSEGCWTKKFTVGPLPSVWVPIGHWMGNRLLLQLEDGKLVLFDPDT 86
            ++H   K  DIW  +EGCW ++F   PL  +  P+ HW    ++L  ++ +L+L+D + 
Sbjct: 264 STVHNVEKFLDIWVLNEGCWIRQFKSRPLLELRNPVAHWKNGNVILDSDNDQLMLYDTNK 323

Query: 85  QETNDLAFQNTMMCQGVFAYMESLVSIK 2
           QE  DL F+ T +C  +  Y ESLVSIK
Sbjct: 324 QELKDLRFKGTGVCYEILVYRESLVSIK 351


>ref|XP_002327664.1| predicted protein [Populus trichocarpa] gi|222836749|gb|EEE75142.1|
           predicted protein [Populus trichocarpa]
          Length = 443

 Score =  134 bits (336), Expect = 1e-29
 Identities = 68/151 (45%), Positives = 99/151 (65%), Gaps = 4/151 (2%)
 Frame = -2

Query: 442 NKCYIYVNGCCYWFGSFEYTS--EIIISFNMANDSFKEMDVPDYAQP-SYKRLAVYDDSL 272
           NKCYI V G  YW GS+      E++I+F+MA +  +E+ +PDY +  + + LAVY+DS+
Sbjct: 250 NKCYICVEGVFYWLGSYGACGDPEVVINFDMATNVCQEIQLPDYDKSINSESLAVYNDSI 309

Query: 271 AFLSLHQTNKNFDIWTWSEGCWTKKFTVGPLPSVWVPIGHWMGNRLLLQLEDGKLVLFDP 92
           A L + ++  +  +WT  E CWTKKF VGPL  V  P+GHW  N ++L  +  +L+L DP
Sbjct: 310 ALLVVQESVLH--VWTLDERCWTKKFVVGPLLGVQYPVGHWQNNTIILISDSYELLLCDP 367

Query: 91  DTQETNDLAFQ-NTMMCQGVFAYMESLVSIK 2
            TQE + L F+  T+ C+G+FAY ESLV +K
Sbjct: 368 RTQEMSGLGFEGGTIRCEGIFAYKESLVPVK 398


>ref|XP_003553895.1| PREDICTED: F-box/kelch-repeat protein At3g06240-like [Glycine max]
          Length = 405

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 48/160 (30%), Positives = 86/160 (53%), Gaps = 14/160 (8%)
 Frame = -2

Query: 442 NKCYIYVNGCCYWFGSFEY---TSEIIISFNMANDSFKEMDVP---DYAQPSYKRLAVYD 281
           ++ + Y N CC+W+G  E    T +++++F+M  +SF+++ VP   D +   +  L  ++
Sbjct: 218 SRVFTYANNCCHWWGFVEESDATQDVVLAFDMVKESFRKIRVPKIRDSSDEKFGTLVPFE 277

Query: 280 DS--LAFL--SLHQTNKNFDIWT----WSEGCWTKKFTVGPLPSVWVPIGHWMGNRLLLQ 125
           +S  + FL   +  T K FD+W     W EG W K+++VGP+  ++  +G +  NR   +
Sbjct: 278 ESASIGFLVYPVRGTEKRFDVWVMKDYWDEGSWVKQYSVGPVQVIYKLVGFYGTNRFFWK 337

Query: 124 LEDGKLVLFDPDTQETNDLAFQNTMMCQGVFAYMESLVSI 5
             + +LVL+  D++ T DL             Y ESLVS+
Sbjct: 338 DSNERLVLY--DSENTRDLQVYGKHDSIRAAKYTESLVSL 375


>gb|ACU18590.1| unknown [Glycine max]
          Length = 405

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 48/160 (30%), Positives = 85/160 (53%), Gaps = 14/160 (8%)
 Frame = -2

Query: 442 NKCYIYVNGCCYWFGSFE---YTSEIIISFNMANDSFKEMDVP---DYAQPSYKRLAVYD 281
           ++ + Y N CC+W+G  E    T +I+++F+M  +SF+++ VP   D +   +  L  ++
Sbjct: 218 SRVFTYANNCCHWWGFVEDSGATQDIVLAFDMVKESFRKIRVPKVRDSSDEKFATLVPFE 277

Query: 280 DSLAF----LSLHQTNKNFDIWT----WSEGCWTKKFTVGPLPSVWVPIGHWMGNRLLLQ 125
           +S +       +    K+FD+W     W EG W K+++VGP+      +G +  NRLL +
Sbjct: 278 ESASIGVLVYPVRGAEKSFDVWVMKDYWDEGSWVKQYSVGPVQVNHRIVGFYGTNRLLWK 337

Query: 124 LEDGKLVLFDPDTQETNDLAFQNTMMCQGVFAYMESLVSI 5
             + +LVL+  D+++T DL             Y ESLVS+
Sbjct: 338 DSNERLVLY--DSEKTRDLQVYGKFDSIRAARYTESLVSL 375


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