BLASTX nr result

ID: Bupleurum21_contig00009003 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00009003
         (344 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273038.1| PREDICTED: F-box protein At2g27310-like [Vit...    89   4e-16
ref|XP_002328106.1| f-box family protein [Populus trichocarpa] g...    85   5e-15
ref|XP_002523851.1| conserved hypothetical protein [Ricinus comm...    81   8e-14
ref|XP_002313604.1| predicted protein [Populus trichocarpa] gi|2...    80   1e-13
ref|XP_004168870.1| PREDICTED: probable F-box protein At1g60180-...    74   1e-11

>ref|XP_002273038.1| PREDICTED: F-box protein At2g27310-like [Vitis vinifera]
          Length = 336

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 47/110 (42%), Positives = 71/110 (64%)
 Frame = +1

Query: 1   AANVSSLKPVSIRPHWDGSAIKATYATILSGDGINTTEFVECKIVAIFRYEEGKYIQLRE 180
           AAN+SSL+PVS++ HW    ++  YAT++ GD    +E V+C IV     +EG  +Q+RE
Sbjct: 191 AANLSSLRPVSVKRHWLTGEVQVRYATVVGGDRTVGSEVVQCGIVVTCAGKEGGEMQVRE 250

Query: 181 ISLCVVDMHRGRLSGEKCLRILEEAMESGERKKVTSAVEVKEMYAKYLDL 330
           ++L V DM    L+G++ L IL+EA+E+G RKK     E K  Y +YL++
Sbjct: 251 VNLQVEDMEGRHLNGKESLVILQEALENGRRKK-AKGEEGKARYERYLEM 299


>ref|XP_002328106.1| f-box family protein [Populus trichocarpa]
           gi|222837621|gb|EEE75986.1| f-box family protein
           [Populus trichocarpa]
          Length = 342

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 44/113 (38%), Positives = 72/113 (63%)
 Frame = +1

Query: 1   AANVSSLKPVSIRPHWDGSAIKATYATILSGDGINTTEFVECKIVAIFRYEEGKYIQLRE 180
           A N+SS +PVS++ HW    +   +ATI++GDG    EFVEC ++     +EG  +++RE
Sbjct: 197 AMNLSSGRPVSVQRHWLTGEVVVKFATIMAGDG-GEKEFVECGVMVCCGKKEGGEMEVRE 255

Query: 181 ISLCVVDMHRGRLSGEKCLRILEEAMESGERKKVTSAVEVKEMYAKYLDLKRK 339
           IS+ + DM    L+G++ L +++EAME GER+K     E K  Y ++++ KR+
Sbjct: 256 ISMGMEDMEGRNLTGKESLVVIQEAMERGERRKGKCGTEGKGRYEEFVERKRE 308


>ref|XP_002523851.1| conserved hypothetical protein [Ricinus communis]
           gi|223536939|gb|EEF38577.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 338

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 45/115 (39%), Positives = 73/115 (63%), Gaps = 2/115 (1%)
 Frame = +1

Query: 1   AANVSSLKPVSIRPHWDGSAIKATYATILSGDGI--NTTEFVECKIVAIFRYEEGKYIQL 174
           A N+SS +PVS++ HW    ++A +ATI +GD    + TE+VEC++V     +EG  +++
Sbjct: 193 AVNISSKRPVSVQRHWLTGEVQAKFATIFAGDRGKGSETEYVECEVVVTCGGKEGGEVRV 252

Query: 175 REISLCVVDMHRGRLSGEKCLRILEEAMESGERKKVTSAVEVKEMYAKYLDLKRK 339
           R++S+ + DM    L+GE  L IL+EA E GER++     + KE Y ++L  KR+
Sbjct: 253 RDVSMGMEDMEGKALTGEDSLVILKEATERGERRR---GEDGKERYKEFLKRKRE 304


>ref|XP_002313604.1| predicted protein [Populus trichocarpa] gi|222850012|gb|EEE87559.1|
           predicted protein [Populus trichocarpa]
          Length = 344

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 41/113 (36%), Positives = 70/113 (61%)
 Frame = +1

Query: 1   AANVSSLKPVSIRPHWDGSAIKATYATILSGDGINTTEFVECKIVAIFRYEEGKYIQLRE 180
           A N+SS +PVS++ HW    +   ++ I++GDG    E+VEC ++     +EG  +++RE
Sbjct: 199 AMNLSSERPVSVQRHWLTGEVVVKFSNIMAGDG-REKEYVECGVMVCCGEKEGGEVEVRE 257

Query: 181 ISLCVVDMHRGRLSGEKCLRILEEAMESGERKKVTSAVEVKEMYAKYLDLKRK 339
           +S+ + DM    L+G+  L IL+EAME GER+K     E K  Y ++++ K++
Sbjct: 258 VSMVMEDMEGKNLTGKDGLVILQEAMERGERRKGKGGKEGKGRYEEFVERKKE 310


>ref|XP_004168870.1| PREDICTED: probable F-box protein At1g60180-like, partial [Cucumis
           sativus]
          Length = 320

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 43/117 (36%), Positives = 67/117 (57%), Gaps = 4/117 (3%)
 Frame = +1

Query: 1   AANVSSLKPVSIRPHWDGSAIKATYATILSGD--GINTTEFVECKIVAIF--RYEEGKYI 168
           AAN+SS +PV +R HW    I+  Y T++ GD    +  E VEC +V     + EEG  +
Sbjct: 190 AANISSRQPVKVRRHWLSGEIQVQYTTVMGGDRRAGSAVEMVECAVVVSCGEKEEEGMEM 249

Query: 169 QLREISLCVVDMHRGRLSGEKCLRILEEAMESGERKKVTSAVEVKEMYAKYLDLKRK 339
            + E+S+ ++DM    L+G+  L IL+EAME G+R       + K  Y +Y ++K+K
Sbjct: 250 SVTEVSMQMLDMEGKHLNGKDSLGILKEAMEKGKRISAKKG-DGKLRYEEYEEMKKK 305


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