BLASTX nr result

ID: Bupleurum21_contig00008738 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00008738
         (378 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265345.2| PREDICTED: NAC domain-containing protein 78-...    81   1e-13
ref|XP_002315338.1| NAC domain protein, IPR003441 [Populus trich...    72   5e-11
ref|XP_002532627.1| conserved hypothetical protein [Ricinus comm...    69   3e-10
emb|CAN70406.1| hypothetical protein VITISV_021988 [Vitis vinifera]    67   2e-09
dbj|BAJ34165.1| unnamed protein product [Thellungiella halophila]      64   1e-08

>ref|XP_002265345.2| PREDICTED: NAC domain-containing protein 78-like [Vitis vinifera]
           gi|296085948|emb|CBI31389.3| unnamed protein product
           [Vitis vinifera]
          Length = 559

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 37/88 (42%), Positives = 60/88 (68%)
 Frame = -1

Query: 378 GIVQIRNTNLSLRGTGISWSFCKDGRLSVVLSFGLSRGDEFSADSETASSIMPNKAHSAV 199
           G++QIR+T LS  G G+ WS+ K G ++ +LSFGL +G+  SA  E  +S+M  KA   +
Sbjct: 474 GMIQIRDTTLS--GNGVDWSYGKSGNINFMLSFGLPQGETNSASLEPIASLMSGKAGPVI 531

Query: 198 YRGLFYFMCLWVLFITMSFKIGSYVCAK 115
            R  FY + +WVL +++S+KIG+ +C++
Sbjct: 532 SRAGFYLIFIWVLILSVSYKIGTCICSR 559


>ref|XP_002315338.1| NAC domain protein, IPR003441 [Populus trichocarpa]
           gi|222864378|gb|EEF01509.1| NAC domain protein,
           IPR003441 [Populus trichocarpa]
          Length = 551

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 36/84 (42%), Positives = 52/84 (61%)
 Frame = -1

Query: 366 IRNTNLSLRGTGISWSFCKDGRLSVVLSFGLSRGDEFSADSETASSIMPNKAHSAVYRGL 187
           IR  N+SL G  + WSF K+G ++++LSFGL +     A     +S+ P K  S V RG 
Sbjct: 469 IRIENMSLGGNEMEWSFGKNGNVNIILSFGLPQQGG-PASLVPMNSLFPGKTESVVSRGW 527

Query: 186 FYFMCLWVLFITMSFKIGSYVCAK 115
            Y M  WVL +++S+KIG+ +CAK
Sbjct: 528 LYLMFFWVLILSVSYKIGTCICAK 551


>ref|XP_002532627.1| conserved hypothetical protein [Ricinus communis]
           gi|223527647|gb|EEF29758.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 514

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 33/84 (39%), Positives = 52/84 (61%)
 Frame = -1

Query: 366 IRNTNLSLRGTGISWSFCKDGRLSVVLSFGLSRGDEFSADSETASSIMPNKAHSAVYRGL 187
           IR  +++    G+ WSF K+G +++VLSF +S+G+   A S  A +    K  S V RG 
Sbjct: 431 IRIESITFGSDGMDWSFGKNGNVNIVLSFVMSQGNVSPAGSAPAGNSFSGKTWSLVSRGW 490

Query: 186 FYFMCLWVLFITMSFKIGSYVCAK 115
           F+ M  WVL +++S+KIG+Y+  K
Sbjct: 491 FFLMFFWVLILSVSYKIGTYISTK 514


>emb|CAN70406.1| hypothetical protein VITISV_021988 [Vitis vinifera]
          Length = 573

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 32/76 (42%), Positives = 49/76 (64%)
 Frame = -1

Query: 378 GIVQIRNTNLSLRGTGISWSFCKDGRLSVVLSFGLSRGDEFSADSETASSIMPNKAHSAV 199
           G++QIR+T LS  G G+ WS+ K G ++ +LSFGL +G+  SA  E  +S+M  KA   +
Sbjct: 474 GMIQIRDTTLS--GNGVDWSYGKSGNINFMLSFGLPQGETNSASLEPIASLMSGKAGPVI 531

Query: 198 YRGLFYFMCLWVLFIT 151
            R  FY + +WVL ++
Sbjct: 532 SRAGFYLIFIWVLILS 547


>dbj|BAJ34165.1| unnamed protein product [Thellungiella halophila]
          Length = 501

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 38/90 (42%), Positives = 56/90 (62%), Gaps = 2/90 (2%)
 Frame = -1

Query: 378 GIVQIRNTNLSLRGTGISWSFCKDGRLSVVLSFGL-SRGDEF-SADSETASSIMPNKAHS 205
           G+++I N  L+   +G+ WS+ K+G L+VVLSFGL  R DE  S+ S+T  +        
Sbjct: 421 GMIRISNMTLAA-DSGMGWSYDKNGNLNVVLSFGLVQRDDEMGSSGSKTGGT-------- 471

Query: 204 AVYRGLFYFMCLWVLFITMSFKIGSYVCAK 115
              R +  FMCLWVL +++SFKIG+ V A+
Sbjct: 472 TATRAMLIFMCLWVLLLSVSFKIGTMVSAR 501


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