BLASTX nr result
ID: Bupleurum21_contig00008519
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00008519
(1031 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI34721.3| unnamed protein product [Vitis vinifera] 300 4e-79
ref|XP_002283316.1| PREDICTED: probable NOT transcription comple... 300 4e-79
emb|CBI16210.3| unnamed protein product [Vitis vinifera] 287 3e-75
ref|NP_001077478.1| CCR4-NOT transcription complex subunit 2 [Ar... 276 6e-72
ref|NP_563795.3| CCR4-NOT transcription complex subunit 2 [Arabi... 276 6e-72
>emb|CBI34721.3| unnamed protein product [Vitis vinifera]
Length = 595
Score = 300 bits (768), Expect = 4e-79
Identities = 164/317 (51%), Positives = 209/317 (65%), Gaps = 39/317 (12%)
Frame = -1
Query: 836 PDSSEITYTTVYSRQSDN---------LVGLHSGNGSFNIPNMAGTYGSRNSSANGGPSS 684
PD++ ++TT +S QS + + GLH+ +GSFNIPNM G+ SRNS+ NGG
Sbjct: 24 PDTTGRSFTTSFSAQSGSAAAFNHLGTIQGLHNIHGSFNIPNMPGSLASRNSTINGGHPG 83
Query: 683 GVQQAAGSISNGRFTMSNLPATLSQPSLASSHGHVGIASNG--GVSPNLGN-GGRLVNSM 513
G+QQ GS+SNGRF +++LP LSQ S ASSHGH G+ + G GVSP LGN G R+ +S+
Sbjct: 84 GIQQPTGSLSNGRFPINHLPTALSQLSHASSHGHPGVTNRGGSGVSPMLGNTGPRITSSI 143
Query: 512 GNLVGGGNVGRSLSSGAGLNYPGVGSRLNLTA-----------------------PQMVS 402
GNL GGGN+GRSLSSG GL PG+ S L+L + PQ++S
Sbjct: 144 GNLAGGGNIGRSLSSGGGLAMPGLASHLSLISNGSGNMGIQGSNRLMGGVLSQGTPQVIS 203
Query: 401 MLGNSYSAGGGQLSQNHFQSGNNR----XXXXXXXSRDHASFDINDFPQLTGQPNSSSNS 234
MLGNSYS+ GG SQN Q+GNN ++A FDINDFPQLT PNS+ +S
Sbjct: 204 MLGNSYSSVGGLRSQNQVQAGNNHLTSMALLKDLSVHENAPFDINDFPQLTAHPNSAGSS 263
Query: 233 QGHLGLTRKQSVGFLQQNQEFSMQNEDFPALPGYKXXXXGSEFQANMHQKEQLHESVMSM 54
QG LG RKQSVG + QNQEFS+QNEDFPALPG+K ++F + H+KEQLH+S +SM
Sbjct: 264 QGQLGSLRKQSVGVVHQNQEFSIQNEDFPALPGFK--GGNTDFPVDSHRKEQLHDSAVSM 321
Query: 53 MQSRHLPVGRSSGFNMG 3
MQS+H P+GRS GFN+G
Sbjct: 322 MQSQHFPMGRSGGFNLG 338
>ref|XP_002283316.1| PREDICTED: probable NOT transcription complex subunit VIP2-like
[Vitis vinifera]
Length = 605
Score = 300 bits (768), Expect = 4e-79
Identities = 164/317 (51%), Positives = 209/317 (65%), Gaps = 39/317 (12%)
Frame = -1
Query: 836 PDSSEITYTTVYSRQSDN---------LVGLHSGNGSFNIPNMAGTYGSRNSSANGGPSS 684
PD++ ++TT +S QS + + GLH+ +GSFNIPNM G+ SRNS+ NGG
Sbjct: 17 PDTTGRSFTTSFSAQSGSAAAFNHLGTIQGLHNIHGSFNIPNMPGSLASRNSTINGGHPG 76
Query: 683 GVQQAAGSISNGRFTMSNLPATLSQPSLASSHGHVGIASNG--GVSPNLGN-GGRLVNSM 513
G+QQ GS+SNGRF +++LP LSQ S ASSHGH G+ + G GVSP LGN G R+ +S+
Sbjct: 77 GIQQPTGSLSNGRFPINHLPTALSQLSHASSHGHPGVTNRGGSGVSPMLGNTGPRITSSI 136
Query: 512 GNLVGGGNVGRSLSSGAGLNYPGVGSRLNLTA-----------------------PQMVS 402
GNL GGGN+GRSLSSG GL PG+ S L+L + PQ++S
Sbjct: 137 GNLAGGGNIGRSLSSGGGLAMPGLASHLSLISNGSGNMGIQGSNRLMGGVLSQGTPQVIS 196
Query: 401 MLGNSYSAGGGQLSQNHFQSGNNR----XXXXXXXSRDHASFDINDFPQLTGQPNSSSNS 234
MLGNSYS+ GG SQN Q+GNN ++A FDINDFPQLT PNS+ +S
Sbjct: 197 MLGNSYSSVGGLRSQNQVQAGNNHLTSMALLKDLSVHENAPFDINDFPQLTAHPNSAGSS 256
Query: 233 QGHLGLTRKQSVGFLQQNQEFSMQNEDFPALPGYKXXXXGSEFQANMHQKEQLHESVMSM 54
QG LG RKQSVG + QNQEFS+QNEDFPALPG+K ++F + H+KEQLH+S +SM
Sbjct: 257 QGQLGSLRKQSVGVVHQNQEFSIQNEDFPALPGFK--GGNTDFPVDSHRKEQLHDSAVSM 314
Query: 53 MQSRHLPVGRSSGFNMG 3
MQS+H P+GRS GFN+G
Sbjct: 315 MQSQHFPMGRSGGFNLG 331
>emb|CBI16210.3| unnamed protein product [Vitis vinifera]
Length = 628
Score = 287 bits (734), Expect = 3e-75
Identities = 158/320 (49%), Positives = 208/320 (65%), Gaps = 43/320 (13%)
Frame = -1
Query: 833 DSSEITYTTVYSRQSD----------NLVGLHSGNGSFNIPNMAGTYGSRNSSANGGPSS 684
DS+ ++ T +S QS ++ GLH+ +GSFN+PNM GT SRNS+ N PS
Sbjct: 18 DSNGRSFATSFSAQSGAASPVFHHSGSIQGLHNIHGSFNVPNMPGTLASRNSTINSVPSG 77
Query: 683 GVQQAAGSISNGRFTMSNLPATLSQPSLASSHGHVGIASNG--GVSPNLGNGG-RLVNSM 513
GVQQ G++S+GR+ ++LP LSQ S SSHGH G+A+ G GVSP LGN G R+ +SM
Sbjct: 78 GVQQPTGNLSSGRYASNSLPVALSQISHGSSHGHSGVANRGGLGVSPILGNAGPRITSSM 137
Query: 512 GNLVGGGNVGRSLSSGAGLNYPGVGSRLNLTA------------------------PQMV 405
GN+VGGGN+GRS+SSG GL+ PG+ SRLNL A PQ++
Sbjct: 138 GNIVGGGNIGRSISSGGGLSVPGIASRLNLAANSGSGSLNVQGPNRLMSGVLQQASPQVI 197
Query: 404 SMLGNSYSAGGGQLSQNHFQSGNN---RXXXXXXXSRDHASFDINDFPQLTGQPNSSSNS 234
SMLGNSY + GG LSQ H Q+ NN S +++ FDINDFPQLT +P+SS
Sbjct: 198 SMLGNSYPSAGGPLSQGHVQTVNNLSSMGMLNDVNSNENSPFDINDFPQLTSRPSSSGGP 257
Query: 233 QGHLGLTRKQSVG---FLQQNQEFSMQNEDFPALPGYKXXXXGSEFQANMHQKEQLHESV 63
QG LG RKQ +G +QQNQEFS+QNEDFPALPG+K +++ ++HQKEQ H++
Sbjct: 258 QGQLGSLRKQGLGVSPIVQQNQEFSIQNEDFPALPGFK--GGNADYAMDLHQKEQFHDNT 315
Query: 62 MSMMQSRHLPVGRSSGFNMG 3
+SMMQS+H +GRS+GFN+G
Sbjct: 316 VSMMQSQHFSMGRSAGFNLG 335
>ref|NP_001077478.1| CCR4-NOT transcription complex subunit 2 [Arabidopsis thaliana]
gi|332190046|gb|AEE28167.1| CCR4-NOT transcription
complex subunit 2 [Arabidopsis thaliana]
Length = 614
Score = 276 bits (706), Expect = 6e-72
Identities = 164/318 (51%), Positives = 208/318 (65%), Gaps = 41/318 (12%)
Frame = -1
Query: 833 DSSEITYTTVYSRQSD----------NLVGLHSGNGSFNIPNMAGTYGSRNSSANGGPSS 684
D S T+T+ +S QS ++ GLH+ +G+FN+PN+AG+ GSRNSS NG PS+
Sbjct: 18 DGSGRTFTSSFSGQSGAASPVFHHAGSIQGLHNIHGNFNVPNLAGSLGSRNSSLNGVPSA 77
Query: 683 GVQQAAGSISNGRFTMSNLPATLSQPSLASSHGHVGIASNG--GVSPNLGN-GGRLVNSM 513
GVQQ GSISNGRF SN+P LSQ S SSHGH G+ + G GVSP LGN G R+ +SM
Sbjct: 78 GVQQQNGSISNGRFASSNIPVALSQMSHGSSHGHSGLTNRGGLGVSPILGNVGSRMTSSM 137
Query: 512 GNLVGGGNVGRSLSSGAGLNYPGVGSRLNLT---------------------APQMVSML 396
GN+VGGG +GR+LSSG GL+ P +GSRLNL +PQ++SML
Sbjct: 138 GNMVGGGTMGRTLSSGGGLSIPSLGSRLNLAVNSGSGNIGQNRMMGGVLPQGSPQVLSML 197
Query: 395 GNSYSAGGGQLSQNHFQSGN---NRXXXXXXXSRDHASFDI-NDFPQLTGQPNSSSNSQG 228
GNSY + GG LSQNH Q+ N + S D + FDI NDFPQLT +P SS+ SQG
Sbjct: 198 GNSYPSAGG-LSQNHVQAMNSLSSMGLLNDMNSNDTSPFDINNDFPQLTSRP-SSAGSQG 255
Query: 227 HLGLTRKQSVG---FLQQNQEFSMQNEDFPALPGYKXXXXGSEFQANMHQKEQLHESVMS 57
LG KQ +G +QQNQEFS+QNEDFPALPGYK +++ ++H KEQLHE+ +
Sbjct: 256 QLGSRLKQGLGISPIVQQNQEFSIQNEDFPALPGYK--GSSADYPMDLHHKEQLHENSVL 313
Query: 56 MMQSRHLPVGRSSGFNMG 3
MMQS+ L +GRS GFN+G
Sbjct: 314 MMQSQQLSMGRSGGFNLG 331
>ref|NP_563795.3| CCR4-NOT transcription complex subunit 2 [Arabidopsis thaliana]
gi|110738383|dbj|BAF01118.1| hypothetical protein
[Arabidopsis thaliana] gi|332190045|gb|AEE28166.1|
CCR4-NOT transcription complex subunit 2 [Arabidopsis
thaliana]
Length = 546
Score = 276 bits (706), Expect = 6e-72
Identities = 164/318 (51%), Positives = 208/318 (65%), Gaps = 41/318 (12%)
Frame = -1
Query: 833 DSSEITYTTVYSRQSD----------NLVGLHSGNGSFNIPNMAGTYGSRNSSANGGPSS 684
D S T+T+ +S QS ++ GLH+ +G+FN+PN+AG+ GSRNSS NG PS+
Sbjct: 18 DGSGRTFTSSFSGQSGAASPVFHHAGSIQGLHNIHGNFNVPNLAGSLGSRNSSLNGVPSA 77
Query: 683 GVQQAAGSISNGRFTMSNLPATLSQPSLASSHGHVGIASNG--GVSPNLGN-GGRLVNSM 513
GVQQ GSISNGRF SN+P LSQ S SSHGH G+ + G GVSP LGN G R+ +SM
Sbjct: 78 GVQQQNGSISNGRFASSNIPVALSQMSHGSSHGHSGLTNRGGLGVSPILGNVGSRMTSSM 137
Query: 512 GNLVGGGNVGRSLSSGAGLNYPGVGSRLNLT---------------------APQMVSML 396
GN+VGGG +GR+LSSG GL+ P +GSRLNL +PQ++SML
Sbjct: 138 GNMVGGGTMGRTLSSGGGLSIPSLGSRLNLAVNSGSGNIGQNRMMGGVLPQGSPQVLSML 197
Query: 395 GNSYSAGGGQLSQNHFQSGN---NRXXXXXXXSRDHASFDI-NDFPQLTGQPNSSSNSQG 228
GNSY + GG LSQNH Q+ N + S D + FDI NDFPQLT +P SS+ SQG
Sbjct: 198 GNSYPSAGG-LSQNHVQAMNSLSSMGLLNDMNSNDTSPFDINNDFPQLTSRP-SSAGSQG 255
Query: 227 HLGLTRKQSVG---FLQQNQEFSMQNEDFPALPGYKXXXXGSEFQANMHQKEQLHESVMS 57
LG KQ +G +QQNQEFS+QNEDFPALPGYK +++ ++H KEQLHE+ +
Sbjct: 256 QLGSRLKQGLGISPIVQQNQEFSIQNEDFPALPGYK--GSSADYPMDLHHKEQLHENSVL 313
Query: 56 MMQSRHLPVGRSSGFNMG 3
MMQS+ L +GRS GFN+G
Sbjct: 314 MMQSQQLSMGRSGGFNLG 331