BLASTX nr result

ID: Bupleurum21_contig00008246 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00008246
         (858 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265472.1| PREDICTED: proteasomal ubiquitin receptor AD...   108   4e-65
ref|XP_003525320.1| PREDICTED: proteasomal ubiquitin receptor AD...   106   7e-65
ref|XP_003530496.1| PREDICTED: proteasomal ubiquitin receptor AD...   105   3e-64
gb|AFK39491.1| unknown [Lotus japonicus]                              105   6e-63
ref|XP_002522941.1| adhesion regulating molecule, putative [Rici...   112   1e-62

>ref|XP_002265472.1| PREDICTED: proteasomal ubiquitin receptor ADRM1 [Vitis vinifera]
           gi|297736028|emb|CBI24066.3| unnamed protein product
           [Vitis vinifera]
          Length = 320

 Score =  108 bits (269), Expect(3) = 4e-65
 Identities = 48/64 (75%), Positives = 56/64 (87%)
 Frame = +2

Query: 2   NVIEDDQIVFPDEAVFEKVNQSSERVYILKFQTDDRKFFFWMQEPDSNSDMQICTSVNLY 181
           NV+EDDQIVFPDEAVFEKVNQ+S R+YILKF TD+RKFFFWMQEP +  D Q+C SVN +
Sbjct: 60  NVLEDDQIVFPDEAVFEKVNQASGRIYILKFNTDNRKFFFWMQEPKAEGDSQLCNSVNYH 119

Query: 182 INQP 193
           IN+P
Sbjct: 120 INRP 123



 Score =  103 bits (256), Expect(3) = 4e-65
 Identities = 57/97 (58%), Positives = 63/97 (64%), Gaps = 1/97 (1%)
 Frame = +3

Query: 285 SAPLQNSEDMTDDDISSRAGNLISSSMGTELTSEVTS-SGPVKLVDLQRILSNIGSTDEA 461
           S P+Q SEDM +DDISSRAGNL+  S+G E+TS+VTS SGPVKL DLQRILSNI   D A
Sbjct: 135 SGPVQISEDMVEDDISSRAGNLVGPSLGAEVTSDVTSLSGPVKLADLQRILSNIEPADGA 194

Query: 462 GDPDAGFGLGDXXXXXXXXXXXXXXXXXQDLAPYLPE 572
           GDPD G GL D                 Q LA YLPE
Sbjct: 195 GDPDEGLGLADILKPDLILPLIETLPMEQRLASYLPE 231



 Score = 85.1 bits (209), Expect(3) = 4e-65
 Identities = 44/53 (83%), Positives = 47/53 (88%)
 Frame = +2

Query: 692 LRTGQIDLTQFGIDPSKYKFTVLSFLEALEDSVLKTSESGSSRLDDKDSRSQT 850
           LRTGQIDL+QFGIDPSKYKFTVLSFLEALED+V K S+SG    DDKDSRSQT
Sbjct: 259 LRTGQIDLSQFGIDPSKYKFTVLSFLEALEDTVCKASQSGQ---DDKDSRSQT 308


>ref|XP_003525320.1| PREDICTED: proteasomal ubiquitin receptor ADRM1-like [Glycine max]
          Length = 321

 Score =  106 bits (264), Expect(3) = 7e-65
 Identities = 58/96 (60%), Positives = 62/96 (64%)
 Frame = +3

Query: 285 SAPLQNSEDMTDDDISSRAGNLISSSMGTELTSEVTSSGPVKLVDLQRILSNIGSTDEAG 464
           S PLQ SEDMT+DDISSRA NL   ++G E TS+VTSSGPVKL DLQRILSNIG  D   
Sbjct: 135 SLPLQISEDMTEDDISSRAANLGIPNLGVEATSDVTSSGPVKLEDLQRILSNIGPADSIV 194

Query: 465 DPDAGFGLGDXXXXXXXXXXXXXXXXXQDLAPYLPE 572
           DPD G GLGD                 Q LAPYLPE
Sbjct: 195 DPDGGLGLGDILKPDLIMPLMDMLPLEQRLAPYLPE 230



 Score =  105 bits (263), Expect(3) = 7e-65
 Identities = 46/64 (71%), Positives = 58/64 (90%)
 Frame = +2

Query: 2   NVIEDDQIVFPDEAVFEKVNQSSERVYILKFQTDDRKFFFWMQEPDSNSDMQICTSVNLY 181
           NV+EDDQI+FP+EA+FEKVNQ+S RVYILKF +DDRKFFFWMQE +++ D Q+C+SVN Y
Sbjct: 60  NVVEDDQIIFPNEAIFEKVNQTSGRVYILKFNSDDRKFFFWMQESNADGDSQLCSSVNDY 119

Query: 182 INQP 193
           IN+P
Sbjct: 120 INRP 123



 Score = 83.6 bits (205), Expect(3) = 7e-65
 Identities = 42/53 (79%), Positives = 47/53 (88%)
 Frame = +2

Query: 692 LRTGQIDLTQFGIDPSKYKFTVLSFLEALEDSVLKTSESGSSRLDDKDSRSQT 850
           LRTGQIDL+QFGIDPSKYKFTVLSFLEALEDSV K+ ES  +R DD+D RSQ+
Sbjct: 258 LRTGQIDLSQFGIDPSKYKFTVLSFLEALEDSVSKSVESEEARQDDQDLRSQS 310


>ref|XP_003530496.1| PREDICTED: proteasomal ubiquitin receptor ADRM1-like [Glycine max]
          Length = 321

 Score =  105 bits (262), Expect(3) = 3e-64
 Identities = 45/64 (70%), Positives = 58/64 (90%)
 Frame = +2

Query: 2   NVIEDDQIVFPDEAVFEKVNQSSERVYILKFQTDDRKFFFWMQEPDSNSDMQICTSVNLY 181
           N++EDDQI+FP+EA+FEKVNQ+S RVYILKF +DDRKFFFWMQE +++ D Q+C+SVN Y
Sbjct: 60  NIVEDDQIIFPNEAIFEKVNQTSGRVYILKFNSDDRKFFFWMQESNADDDSQLCSSVNDY 119

Query: 182 INQP 193
           IN+P
Sbjct: 120 INRP 123



 Score =  104 bits (259), Expect(3) = 3e-64
 Identities = 57/96 (59%), Positives = 61/96 (63%)
 Frame = +3

Query: 285 SAPLQNSEDMTDDDISSRAGNLISSSMGTELTSEVTSSGPVKLVDLQRILSNIGSTDEAG 464
           S PLQ SEDM +DDISSRA NL   ++G E TS+VTSSGPVKL DLQRILSNIG  D   
Sbjct: 135 SLPLQVSEDMAEDDISSRAANLGIPNLGVEATSDVTSSGPVKLEDLQRILSNIGPADSIV 194

Query: 465 DPDAGFGLGDXXXXXXXXXXXXXXXXXQDLAPYLPE 572
           DPD G GLGD                 Q LAPYLPE
Sbjct: 195 DPDGGLGLGDILKPDLIMPLMDTLPLEQRLAPYLPE 230



 Score = 84.0 bits (206), Expect(3) = 3e-64
 Identities = 42/53 (79%), Positives = 47/53 (88%)
 Frame = +2

Query: 692 LRTGQIDLTQFGIDPSKYKFTVLSFLEALEDSVLKTSESGSSRLDDKDSRSQT 850
           LRTGQIDL+QFGIDPSKYKFTVLSFLEALEDSV K+ ES  +R DD+D RSQ+
Sbjct: 258 LRTGQIDLSQFGIDPSKYKFTVLSFLEALEDSVSKSVESEEARQDDRDLRSQS 310


>gb|AFK39491.1| unknown [Lotus japonicus]
          Length = 318

 Score =  105 bits (263), Expect(3) = 6e-63
 Identities = 48/63 (76%), Positives = 58/63 (92%)
 Frame = +2

Query: 2   NVIEDDQIVFPDEAVFEKVNQSSERVYILKFQTDDRKFFFWMQEPDSNSDMQICTSVNLY 181
           NVIEDDQI+FP+EAVFEKVNQ+S RVYILKF TDDRKFFFWMQE ++++D Q+C+SVN Y
Sbjct: 59  NVIEDDQIIFPNEAVFEKVNQASGRVYILKFNTDDRKFFFWMQESNADNDSQLCSSVNDY 118

Query: 182 INQ 190
           IN+
Sbjct: 119 INR 121



 Score =  105 bits (261), Expect(3) = 6e-63
 Identities = 55/94 (58%), Positives = 61/94 (64%)
 Frame = +3

Query: 291 PLQNSEDMTDDDISSRAGNLISSSMGTELTSEVTSSGPVKLVDLQRILSNIGSTDEAGDP 470
           PLQ SEDM +DDISSRA NL + ++G E TS+VTSSGPV+L DLQRIL NIGS D   DP
Sbjct: 136 PLQVSEDMAEDDISSRAANLFAPNLGVEATSDVTSSGPVRLEDLQRILGNIGSADSIIDP 195

Query: 471 DAGFGLGDXXXXXXXXXXXXXXXXXQDLAPYLPE 572
           D G GLGD                 Q LAPYLPE
Sbjct: 196 DGGLGLGDILKPDLIMPLMEMLSLEQHLAPYLPE 229



 Score = 78.2 bits (191), Expect(3) = 6e-63
 Identities = 40/51 (78%), Positives = 44/51 (86%)
 Frame = +2

Query: 692 LRTGQIDLTQFGIDPSKYKFTVLSFLEALEDSVLKTSESGSSRLDDKDSRS 844
           L+TGQIDL+QFGIDPSKYKFTVLSFLEALEDSVLK+ E   SR DD  S+S
Sbjct: 257 LKTGQIDLSQFGIDPSKYKFTVLSFLEALEDSVLKSVEPEESRQDDLRSQS 307


>ref|XP_002522941.1| adhesion regulating molecule, putative [Ricinus communis]
           gi|223537835|gb|EEF39452.1| adhesion regulating
           molecule, putative [Ricinus communis]
          Length = 557

 Score =  112 bits (281), Expect(3) = 1e-62
 Identities = 50/64 (78%), Positives = 57/64 (89%)
 Frame = +2

Query: 2   NVIEDDQIVFPDEAVFEKVNQSSERVYILKFQTDDRKFFFWMQEPDSNSDMQICTSVNLY 181
           NV+EDDQI+FPDEAVFEKVNQ+S RVYILKF TDDRKFFFWMQEP +  D Q+C+SVN Y
Sbjct: 298 NVVEDDQIIFPDEAVFEKVNQASGRVYILKFNTDDRKFFFWMQEPKAEDDWQLCSSVNYY 357

Query: 182 INQP 193
           IN+P
Sbjct: 358 INRP 361



 Score =  100 bits (249), Expect(3) = 1e-62
 Identities = 54/95 (56%), Positives = 62/95 (65%)
 Frame = +3

Query: 288 APLQNSEDMTDDDISSRAGNLISSSMGTELTSEVTSSGPVKLVDLQRILSNIGSTDEAGD 467
           APLQ SEDM +DDISSRAGNL+  ++G E++   +SSGPVKL DLQRILSNIG    AGD
Sbjct: 374 APLQVSEDMVEDDISSRAGNLVVPNLGAEVSDVSSSSGPVKLEDLQRILSNIGHGGGAGD 433

Query: 468 PDAGFGLGDXXXXXXXXXXXXXXXXXQDLAPYLPE 572
           PDAG GLGD                 + LA YLPE
Sbjct: 434 PDAGLGLGDILKPDLILPFIDTLPLEERLASYLPE 468



 Score = 74.7 bits (182), Expect(3) = 1e-62
 Identities = 40/53 (75%), Positives = 43/53 (81%)
 Frame = +2

Query: 692 LRTGQIDLTQFGIDPSKYKFTVLSFLEALEDSVLKTSESGSSRLDDKDSRSQT 850
           LRTGQIDL+QFGIDPSKYKFTVLSFLEALEDS    SE   SR +DKD  SQ+
Sbjct: 496 LRTGQIDLSQFGIDPSKYKFTVLSFLEALEDSASPVSE--ESRQEDKDLTSQS 546


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