BLASTX nr result

ID: Bupleurum21_contig00008172 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00008172
         (1282 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002329087.1| predicted protein [Populus trichocarpa] gi|2...   193   9e-47
ref|XP_002263054.1| PREDICTED: uncharacterized protein LOC100256...   191   5e-46
ref|XP_003634678.1| PREDICTED: uncharacterized protein LOC100260...   190   8e-46
ref|XP_002317499.1| predicted protein [Populus trichocarpa] gi|2...   188   2e-45
ref|XP_004146250.1| PREDICTED: uncharacterized protein LOC101222...   188   3e-45

>ref|XP_002329087.1| predicted protein [Populus trichocarpa] gi|222869756|gb|EEF06887.1|
           predicted protein [Populus trichocarpa]
          Length = 144

 Score =  193 bits (490), Expect = 9e-47
 Identities = 94/144 (65%), Positives = 106/144 (73%)
 Frame = +1

Query: 505 MGSYTFFIVCMLHSVVAITCGVLMMFYTNEIYVYSHGRETANKLMGSTPHDQLLIQTSDX 684
           MGS  FF++CMLHSV+A+TCG LMMFYTNE  V+ HG E A KL GSTPHDQLL+QTSD 
Sbjct: 1   MGSSGFFLICMLHSVMALTCGALMMFYTNEATVFGHGIEIATKLKGSTPHDQLLVQTSDS 60

Query: 685 XXXXXXXXXXXXXXMVAFVKDRDFQVLFARGCVFLHFATAIWRIYFIRNLEDLGGNWLRL 864
                         MVAFVKDR+FQ  FA+GCV LH + A WRIYF R LEDL  +  RL
Sbjct: 61  FSGLLLFAIGFLLFMVAFVKDREFQSFFAKGCVLLHVSMAFWRIYFERKLEDLARDLPRL 120

Query: 865 VSGDIALALSWVFFLLYNWREKYD 936
           V GDIALALSWVFFL+Y+WREKYD
Sbjct: 121 VVGDIALALSWVFFLVYSWREKYD 144


>ref|XP_002263054.1| PREDICTED: uncharacterized protein LOC100256771 [Vitis vinifera]
           gi|297735997|emb|CBI23971.3| unnamed protein product
           [Vitis vinifera]
          Length = 150

 Score =  191 bits (484), Expect = 5e-46
 Identities = 89/146 (60%), Positives = 109/146 (74%), Gaps = 1/146 (0%)
 Frame = +1

Query: 502 SMGSYT-FFIVCMLHSVVAITCGVLMMFYTNEIYVYSHGRETANKLMGSTPHDQLLIQTS 678
           SMGS + FF++C+LHS++A+TCG LMMFY  EIY + HG ETA KL+GSTPHDQLLI+TS
Sbjct: 5   SMGSSSGFFVICLLHSIIALTCGGLMMFYMKEIYEFGHGPETATKLLGSTPHDQLLIRTS 64

Query: 679 DXXXXXXXXXXXXXXXMVAFVKDRDFQVLFARGCVFLHFATAIWRIYFIRNLEDLGGNWL 858
           D               MVAFV+DRDFQ  FA+GC+ LH + A+WR YF R +EDL  +WL
Sbjct: 65  DSFSGLLLFAIGFLLFMVAFVRDRDFQSFFAKGCIVLHVSMALWRFYFERRVEDLALDWL 124

Query: 859 RLVSGDIALALSWVFFLLYNWREKYD 936
           R + GDI LALSWVFFL+Y+WREKYD
Sbjct: 125 RQIVGDILLALSWVFFLVYSWREKYD 150


>ref|XP_003634678.1| PREDICTED: uncharacterized protein LOC100260596 [Vitis vinifera]
          Length = 144

 Score =  190 bits (482), Expect = 8e-46
 Identities = 90/144 (62%), Positives = 104/144 (72%)
 Frame = +1

Query: 505 MGSYTFFIVCMLHSVVAITCGVLMMFYTNEIYVYSHGRETANKLMGSTPHDQLLIQTSDX 684
           MGS  FF+ C LHSV+A+TCG LMMFYTNEI+V+ HG E A KL GSTPHDQLLI+TSD 
Sbjct: 1   MGSAAFFLTCSLHSVIALTCGALMMFYTNEIFVFGHGPEIARKLQGSTPHDQLLIRTSDS 60

Query: 685 XXXXXXXXXXXXXXMVAFVKDRDFQVLFARGCVFLHFATAIWRIYFIRNLEDLGGNWLRL 864
                         MVAFVKDR+FQ  FA+GCV LH   A+WRIYF R LEDL  +W + 
Sbjct: 61  FSGLLLFAIGFLLFMVAFVKDREFQSFFAKGCVTLHVFMALWRIYFERKLEDLAWDWPKQ 120

Query: 865 VSGDIALALSWVFFLLYNWREKYD 936
           V GDI LALSWVF ++Y+WREKYD
Sbjct: 121 VVGDIVLALSWVFLVVYSWREKYD 144


>ref|XP_002317499.1| predicted protein [Populus trichocarpa] gi|222860564|gb|EEE98111.1|
           predicted protein [Populus trichocarpa]
          Length = 144

 Score =  188 bits (478), Expect = 2e-45
 Identities = 90/144 (62%), Positives = 106/144 (73%)
 Frame = +1

Query: 505 MGSYTFFIVCMLHSVVAITCGVLMMFYTNEIYVYSHGRETANKLMGSTPHDQLLIQTSDX 684
           MGS  FF+VCMLHSV+A+TCG LMMF+TNE+ V+ HG E A KL GST HDQLLIQTS+ 
Sbjct: 1   MGSSGFFLVCMLHSVIALTCGALMMFFTNEVTVFGHGIEVATKLKGSTSHDQLLIQTSES 60

Query: 685 XXXXXXXXXXXXXXMVAFVKDRDFQVLFARGCVFLHFATAIWRIYFIRNLEDLGGNWLRL 864
                         MVAFVKDR+FQ+ FA+GC  LH + A WR+YF + LEDL  +  RL
Sbjct: 61  FSGLLLFAIGFLLFMVAFVKDREFQIFFAKGCTSLHVSVAFWRVYFEQKLEDLAHDLPRL 120

Query: 865 VSGDIALALSWVFFLLYNWREKYD 936
           V GDIALALSWVFFL+Y+WREKYD
Sbjct: 121 VVGDIALALSWVFFLVYSWREKYD 144


>ref|XP_004146250.1| PREDICTED: uncharacterized protein LOC101222658 [Cucumis sativus]
           gi|449525359|ref|XP_004169685.1| PREDICTED:
           uncharacterized LOC101222658 [Cucumis sativus]
          Length = 144

 Score =  188 bits (477), Expect = 3e-45
 Identities = 87/144 (60%), Positives = 106/144 (73%)
 Frame = +1

Query: 505 MGSYTFFIVCMLHSVVAITCGVLMMFYTNEIYVYSHGRETANKLMGSTPHDQLLIQTSDX 684
           M S  F ++CMLHS++A+TCG LMMFY++E+YV+ HG ETA KL GS+PHDQLLI+TSD 
Sbjct: 1   MTSSGFCLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIKTSDS 60

Query: 685 XXXXXXXXXXXXXXMVAFVKDRDFQVLFARGCVFLHFATAIWRIYFIRNLEDLGGNWLRL 864
                         MVAFV+DR+FQ  FA+GCV LH   AIWR+YF R LEDL  +W R 
Sbjct: 61  FSGLLLFTVGLLLFMVAFVRDREFQSFFAKGCVLLHLGMAIWRVYFERKLEDLARDWPRQ 120

Query: 865 VSGDIALALSWVFFLLYNWREKYD 936
           V GD+ LALSWVFFL+Y+WREKYD
Sbjct: 121 VVGDVTLALSWVFFLVYSWREKYD 144


Top