BLASTX nr result

ID: Bupleurum21_contig00007127 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00007127
         (272 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326295.1| light-harvesting complex I protein Lhca6 [Po...   173   1e-41
gb|ABK96605.1| unknown [Populus trichocarpa x Populus deltoides]      172   2e-41
gb|AFK42470.1| unknown [Lotus japonicus]                              172   3e-41
gb|AFK45037.1| unknown [Medicago truncatula]                          171   4e-41
ref|XP_003595341.1| Chlorophyll a-b binding protein [Medicago tr...   171   4e-41

>ref|XP_002326295.1| light-harvesting complex I protein Lhca6 [Populus trichocarpa]
           gi|222833488|gb|EEE71965.1| light-harvesting complex I
           protein Lhca6 [Populus trichocarpa]
          Length = 261

 Score =  173 bits (438), Expect = 1e-41
 Identities = 75/90 (83%), Positives = 82/90 (91%)
 Frame = +2

Query: 2   WFEAGSVEYFADPITLFVVQLALMGWVEGRRWADMINPGCVDIEPKLPHKKNPKPDVGYP 181
           WF+AG+ EYFADP TLFVVQL LMGW+EGRRWADMI PGCVDI+PKLPHK  PKPDVGYP
Sbjct: 129 WFDAGTREYFADPTTLFVVQLILMGWIEGRRWADMIKPGCVDIDPKLPHKTKPKPDVGYP 188

Query: 182 GGLFFDPWMYGRGSPEPVMVLRTKEIKNGR 271
           GGL+FDPW +GRGSPEPVM +RTKEIKNGR
Sbjct: 189 GGLWFDPWNWGRGSPEPVMAIRTKEIKNGR 218


>gb|ABK96605.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 261

 Score =  172 bits (437), Expect = 2e-41
 Identities = 74/90 (82%), Positives = 82/90 (91%)
 Frame = +2

Query: 2   WFEAGSVEYFADPITLFVVQLALMGWVEGRRWADMINPGCVDIEPKLPHKKNPKPDVGYP 181
           WF+AG+ EYFADP TLFVVQL LMGW+EGRRWADMI PGCVDI+PKLPHK  PKPD+GYP
Sbjct: 129 WFDAGTREYFADPTTLFVVQLILMGWIEGRRWADMIKPGCVDIDPKLPHKTKPKPDIGYP 188

Query: 182 GGLFFDPWMYGRGSPEPVMVLRTKEIKNGR 271
           GGL+FDPW +GRGSPEPVM +RTKEIKNGR
Sbjct: 189 GGLWFDPWNWGRGSPEPVMAIRTKEIKNGR 218


>gb|AFK42470.1| unknown [Lotus japonicus]
          Length = 259

 Score =  172 bits (436), Expect = 3e-41
 Identities = 76/90 (84%), Positives = 85/90 (94%)
 Frame = +2

Query: 2   WFEAGSVEYFADPITLFVVQLALMGWVEGRRWADMINPGCVDIEPKLPHKKNPKPDVGYP 181
           W+EAG+ EYFADP TLF+VQLALMGWVEGRRWAD++NPG VDIEPKLP++ NPKPDVGYP
Sbjct: 127 WYEAGTQEYFADPTTLFIVQLALMGWVEGRRWADLVNPGSVDIEPKLPNRPNPKPDVGYP 186

Query: 182 GGLFFDPWMYGRGSPEPVMVLRTKEIKNGR 271
           GGL+FDP M+GRGSPEPVMVLRTKEIKNGR
Sbjct: 187 GGLWFDPMMWGRGSPEPVMVLRTKEIKNGR 216


>gb|AFK45037.1| unknown [Medicago truncatula]
          Length = 267

 Score =  171 bits (434), Expect = 4e-41
 Identities = 76/90 (84%), Positives = 84/90 (93%)
 Frame = +2

Query: 2   WFEAGSVEYFADPITLFVVQLALMGWVEGRRWADMINPGCVDIEPKLPHKKNPKPDVGYP 181
           W+ AGSVEYFADP TLF+VQLALMGWVEGRRWAD++NPG VDIEPKLP++ NPKPDVGYP
Sbjct: 135 WYNAGSVEYFADPTTLFIVQLALMGWVEGRRWADIVNPGSVDIEPKLPNRPNPKPDVGYP 194

Query: 182 GGLFFDPWMYGRGSPEPVMVLRTKEIKNGR 271
           GGL+FDP  +GRGSPEPVMVLRTKEIKNGR
Sbjct: 195 GGLWFDPMQWGRGSPEPVMVLRTKEIKNGR 224


>ref|XP_003595341.1| Chlorophyll a-b binding protein [Medicago truncatula]
           gi|355484389|gb|AES65592.1| Chlorophyll a-b binding
           protein [Medicago truncatula]
          Length = 267

 Score =  171 bits (434), Expect = 4e-41
 Identities = 76/90 (84%), Positives = 84/90 (93%)
 Frame = +2

Query: 2   WFEAGSVEYFADPITLFVVQLALMGWVEGRRWADMINPGCVDIEPKLPHKKNPKPDVGYP 181
           W+ AGSVEYFADP TLF+VQLALMGWVEGRRWAD++NPG VDIEPKLP++ NPKPDVGYP
Sbjct: 135 WYNAGSVEYFADPTTLFIVQLALMGWVEGRRWADIVNPGSVDIEPKLPNRPNPKPDVGYP 194

Query: 182 GGLFFDPWMYGRGSPEPVMVLRTKEIKNGR 271
           GGL+FDP  +GRGSPEPVMVLRTKEIKNGR
Sbjct: 195 GGLWFDPMQWGRGSPEPVMVLRTKEIKNGR 224


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