BLASTX nr result

ID: Bupleurum21_contig00007006 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00007006
         (303 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27770.3| unnamed protein product [Vitis vinifera]              103   2e-20
ref|XP_002276637.1| PREDICTED: auxin response factor 19-like [Vi...   103   2e-20
emb|CAN69277.1| hypothetical protein VITISV_023245 [Vitis vinifera]   103   2e-20
ref|XP_002516230.1| Auxin response factor, putative [Ricinus com...    72   6e-11
ref|XP_002326300.1| predicted protein [Populus trichocarpa] gi|2...    71   1e-10

>emb|CBI27770.3| unnamed protein product [Vitis vinifera]
          Length = 878

 Score =  103 bits (256), Expect = 2e-20
 Identities = 52/90 (57%), Positives = 57/90 (63%)
 Frame = +3

Query: 33  TPVSPRLEPQVPLHXXXXXXXXXXXXXXXXXXXXSGNSFSASMLLPSAQFPINQLLGQHK 212
           +PVSPRL+PQ P                      S NSFS S L+ S Q P+NQL GQHK
Sbjct: 561 SPVSPRLQPQQPQQQQANQQNQSLQHLSLSQQQLSSNSFSTSALMQSQQIPMNQLQGQHK 620

Query: 213 PIGVTRAHSGVTDGDAPSCSTSPSTNNCQV 302
           PI   RAHSG+TDGDAPSCSTSPSTNNCQV
Sbjct: 621 PITAIRAHSGLTDGDAPSCSTSPSTNNCQV 650


>ref|XP_002276637.1| PREDICTED: auxin response factor 19-like [Vitis vinifera]
          Length = 1084

 Score =  103 bits (256), Expect = 2e-20
 Identities = 52/90 (57%), Positives = 57/90 (63%)
 Frame = +3

Query: 33  TPVSPRLEPQVPLHXXXXXXXXXXXXXXXXXXXXSGNSFSASMLLPSAQFPINQLLGQHK 212
           +PVSPRL+PQ P                      S NSFS S L+ S Q P+NQL GQHK
Sbjct: 678 SPVSPRLQPQQPQQQQANQQNQSLQHLSLSQQQLSSNSFSTSALMQSQQIPMNQLQGQHK 737

Query: 213 PIGVTRAHSGVTDGDAPSCSTSPSTNNCQV 302
           PI   RAHSG+TDGDAPSCSTSPSTNNCQV
Sbjct: 738 PITAIRAHSGLTDGDAPSCSTSPSTNNCQV 767


>emb|CAN69277.1| hypothetical protein VITISV_023245 [Vitis vinifera]
          Length = 1183

 Score =  103 bits (256), Expect = 2e-20
 Identities = 52/90 (57%), Positives = 57/90 (63%)
 Frame = +3

Query: 33   TPVSPRLEPQVPLHXXXXXXXXXXXXXXXXXXXXSGNSFSASMLLPSAQFPINQLLGQHK 212
            +PVSPRL+PQ P                      S NSFS S L+ S Q P+NQL GQHK
Sbjct: 777  SPVSPRLQPQQPQQQQANQQNQSLQHLSLSQQQLSSNSFSTSALMQSQQIPMNQLQGQHK 836

Query: 213  PIGVTRAHSGVTDGDAPSCSTSPSTNNCQV 302
            PI   RAHSG+TDGDAPSCSTSPSTNNCQV
Sbjct: 837  PITAIRAHSGLTDGDAPSCSTSPSTNNCQV 866


>ref|XP_002516230.1| Auxin response factor, putative [Ricinus communis]
           gi|223544716|gb|EEF46232.1| Auxin response factor,
           putative [Ricinus communis]
          Length = 1119

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 33/56 (58%), Positives = 40/56 (71%)
 Frame = +3

Query: 135 SGNSFSASMLLPSAQFPINQLLGQHKPIGVTRAHSGVTDGDAPSCSTSPSTNNCQV 302
           S NSFS + L+ S  FP++Q  G  K   + R HS +TDGDAPSCSTSPSTNNCQ+
Sbjct: 747 SSNSFSTAALMQSQSFPVSQPQGLQKSPTIIRPHSTLTDGDAPSCSTSPSTNNCQI 802


>ref|XP_002326300.1| predicted protein [Populus trichocarpa] gi|222833493|gb|EEE71970.1|
           predicted protein [Populus trichocarpa]
          Length = 1057

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 32/54 (59%), Positives = 39/54 (72%)
 Frame = +3

Query: 141 NSFSASMLLPSAQFPINQLLGQHKPIGVTRAHSGVTDGDAPSCSTSPSTNNCQV 302
           NSFS + L+ +  FP+NQ  G  KP    RA S +TDG+APSCSTSPSTNNCQ+
Sbjct: 683 NSFSTAALMQTQSFPMNQPQGLQKPPMAVRARSSITDGEAPSCSTSPSTNNCQI 736


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