BLASTX nr result

ID: Bupleurum21_contig00006948 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00006948
         (1019 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301111.1| predicted protein [Populus trichocarpa] gi|2...   171   9e-66
emb|CBI19299.3| unnamed protein product [Vitis vinifera]              166   5e-64
ref|XP_002285623.1| PREDICTED: XIAP-associated factor 1-like [Vi...   165   1e-63
ref|XP_002527351.1| nucleic acid binding protein, putative [Rici...   166   2e-61
ref|XP_004136248.1| PREDICTED: XIAP-associated factor 1-like iso...   155   3e-61

>ref|XP_002301111.1| predicted protein [Populus trichocarpa] gi|222842837|gb|EEE80384.1|
           predicted protein [Populus trichocarpa]
          Length = 201

 Score =  171 bits (432), Expect(2) = 9e-66
 Identities = 81/127 (63%), Positives = 98/127 (77%), Gaps = 2/127 (1%)
 Frame = -3

Query: 591 LDVHKGENCPKRIVTCDYCEFPLPAVDLFEHQEVCGNRTELCNLCNKYIRLRERNNHESI 412
           L VHKGENCP+RIVTC++CEFPLPAVDL EHQEVCGNRTELC++CNKYIRLRER NHES 
Sbjct: 75  LAVHKGENCPQRIVTCEFCEFPLPAVDLAEHQEVCGNRTELCHMCNKYIRLRERYNHESR 134

Query: 411 CNGIQNIPAEPLRN--TVDAGSGHRPQRTQPTGFSSKSLIFTIAITGMAVLLGSLLFQRQ 238
           C G+ +   E  R+    +      PQR QP  FS K L+FTIAITG+AVLLGS LFQ++
Sbjct: 135 CTGLPDTTVESSRDVRAAERRQPQGPQRRQPQDFSRKRLLFTIAITGIAVLLGSFLFQKK 194

Query: 237 NDNTPMH 217
            +++ +H
Sbjct: 195 TEDSQVH 201



 Score =  107 bits (266), Expect(2) = 9e-66
 Identities = 45/58 (77%), Positives = 55/58 (94%)
 Frame = -2

Query: 871 MAEASDQATSICNHCNRDIPSSNIDLHYAHCSRNLEKCEVCGDMVPKKYAEEHFLSTH 698
           MA AS+++TSIC+HC+R IPSSNIDLHYAHC RNL+KC++CGDMVPKK+AEEHFL+TH
Sbjct: 1   MAVASEESTSICSHCDRAIPSSNIDLHYAHCFRNLKKCKICGDMVPKKHAEEHFLNTH 58


>emb|CBI19299.3| unnamed protein product [Vitis vinifera]
          Length = 206

 Score =  166 bits (421), Expect(2) = 5e-64
 Identities = 78/132 (59%), Positives = 100/132 (75%), Gaps = 7/132 (5%)
 Frame = -3

Query: 591 LDVHKGENCPKRIVTCDYCEFPLPAVDLFEHQEVCGNRTELCNLCNKYIRLRERNNHESI 412
           L VH+GENCP+RIVTC++CEFPLPA+DL EHQEVCGNRTELC+LC +Y+RLRERN+HE+ 
Sbjct: 75  LAVHRGENCPQRIVTCEFCEFPLPAIDLSEHQEVCGNRTELCHLCRRYVRLRERNDHEAN 134

Query: 411 CNGIQ----NIPAEPLRNTVDAGSGHRPQ---RTQPTGFSSKSLIFTIAITGMAVLLGSL 253
           CNG+      +P   +  + DA +  R Q   R  P  FS + ++FTIAITG+AV+LGSL
Sbjct: 135 CNGVSYDSVGVPDNTVSPSRDARAAEREQGGRRRPPQEFSQRRVLFTIAITGIAVILGSL 194

Query: 252 LFQRQNDNTPMH 217
            FQR+ +NT MH
Sbjct: 195 FFQRKTENTEMH 206



 Score =  105 bits (262), Expect(2) = 5e-64
 Identities = 44/58 (75%), Positives = 54/58 (93%)
 Frame = -2

Query: 871 MAEASDQATSICNHCNRDIPSSNIDLHYAHCSRNLEKCEVCGDMVPKKYAEEHFLSTH 698
           MA AS++ATSIC+HC+R IPS+NIDLHY HCSRNLE+C+ CGDMVPKK+AEEH+L+TH
Sbjct: 1   MATASNEATSICSHCDRSIPSTNIDLHYVHCSRNLERCKHCGDMVPKKHAEEHYLNTH 58


>ref|XP_002285623.1| PREDICTED: XIAP-associated factor 1-like [Vitis vinifera]
          Length = 207

 Score =  165 bits (417), Expect(2) = 1e-63
 Identities = 80/133 (60%), Positives = 99/133 (74%), Gaps = 8/133 (6%)
 Frame = -3

Query: 591 LDVHKGENCPKRIVTCDYCEFPLPAVDLFEHQEVCGNRTELCNLCNKYIRLRERNNHESI 412
           L VH+GENCP+RIVTC++CEFPLPA+DL EHQEVCGNRTELC+LC +Y+RLRERN+HE+ 
Sbjct: 75  LAVHRGENCPQRIVTCEFCEFPLPAIDLSEHQEVCGNRTELCHLCRRYVRLRERNDHEAN 134

Query: 411 CNGIQNIPAEPLRNTV-----DAGSGHRPQ---RTQPTGFSSKSLIFTIAITGMAVLLGS 256
           CNG+         NTV     DA +  R Q   R  P  FS + ++FTIAITG+AV+LGS
Sbjct: 135 CNGVSYDSVGVPDNTVSPSRRDARAAEREQGGRRRPPQEFSQRRVLFTIAITGIAVILGS 194

Query: 255 LLFQRQNDNTPMH 217
           L FQR+ +NT MH
Sbjct: 195 LFFQRKTENTEMH 207



 Score =  105 bits (262), Expect(2) = 1e-63
 Identities = 44/58 (75%), Positives = 54/58 (93%)
 Frame = -2

Query: 871 MAEASDQATSICNHCNRDIPSSNIDLHYAHCSRNLEKCEVCGDMVPKKYAEEHFLSTH 698
           MA AS++ATSIC+HC+R IPS+NIDLHY HCSRNLE+C+ CGDMVPKK+AEEH+L+TH
Sbjct: 1   MATASNEATSICSHCDRSIPSTNIDLHYVHCSRNLERCKHCGDMVPKKHAEEHYLNTH 58


>ref|XP_002527351.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223533270|gb|EEF35023.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 199

 Score =  166 bits (421), Expect(2) = 2e-61
 Identities = 79/128 (61%), Positives = 98/128 (76%), Gaps = 3/128 (2%)
 Frame = -3

Query: 591 LDVHKGENCPKRIVTCDYCEFPLPAVDLFEHQEVCGNRTELCNLCNKYIRLRERNNHESI 412
           L +HKGENCP+RIVTC++CEFPLPA+DL EHQEVCGNRTELC+LCN+YIRLRER NHE  
Sbjct: 75  LAIHKGENCPQRIVTCEFCEFPLPAIDLAEHQEVCGNRTELCHLCNRYIRLRERYNHEIR 134

Query: 411 CNGIQNIPAEPLRNTVDAGSGHRPQ---RTQPTGFSSKSLIFTIAITGMAVLLGSLLFQR 241
           C G+ N     +  + D  +  RPQ   R  P  +S + L+FTIAITG+AV+LGSLLFQR
Sbjct: 135 CTGVTN---NIVGTSRDVRAAERPQGAPRRPPQDYSRRRLMFTIAITGIAVILGSLLFQR 191

Query: 240 QNDNTPMH 217
           + +N P+H
Sbjct: 192 KTENNPVH 199



 Score = 97.1 bits (240), Expect(2) = 2e-61
 Identities = 40/58 (68%), Positives = 49/58 (84%)
 Frame = -2

Query: 871 MAEASDQATSICNHCNRDIPSSNIDLHYAHCSRNLEKCEVCGDMVPKKYAEEHFLSTH 698
           MA AS++ T++CNHCNR IPS N DLH  HCSRNLEKC+VCGDM+PKK+ +EHF +TH
Sbjct: 1   MAVASEETTTMCNHCNRAIPSLNYDLHSVHCSRNLEKCKVCGDMIPKKHYDEHFSNTH 58


>ref|XP_004136248.1| PREDICTED: XIAP-associated factor 1-like isoform 1 [Cucumis
           sativus] gi|449436938|ref|XP_004136249.1| PREDICTED:
           XIAP-associated factor 1-like isoform 2 [Cucumis
           sativus] gi|449521888|ref|XP_004167961.1| PREDICTED:
           XIAP-associated factor 1-like isoform 1 [Cucumis
           sativus] gi|449521890|ref|XP_004167962.1| PREDICTED:
           XIAP-associated factor 1-like isoform 2 [Cucumis
           sativus]
          Length = 207

 Score =  155 bits (391), Expect(2) = 3e-61
 Identities = 79/135 (58%), Positives = 98/135 (72%), Gaps = 10/135 (7%)
 Frame = -3

Query: 591 LDVHKGENCPKRIVTCDYCEFPLPAVDLFEHQEVCGNRTELCNLCNKYIRLRERNNHESI 412
           L +HKGENCP+RIVTC++CEFPLPA+DL EHQEVCGNRTELC LC  YIRLRER NHE+ 
Sbjct: 75  LAIHKGENCPQRIVTCEFCEFPLPAIDLAEHQEVCGNRTELCPLCRCYIRLRERYNHENN 134

Query: 411 CNGIQNIPAEPL-RNTVDAGSG---------HRPQRTQPTGFSSKSLIFTIAITGMAVLL 262
           C GI  IPA+ +  ++ D G+             +R QP  FS++ LIFTIAITG+AVLL
Sbjct: 135 CKGI--IPADNIAESSRDVGAAPERDHQARDRGARRRQPQEFSTRRLIFTIAITGIAVLL 192

Query: 261 GSLLFQRQNDNTPMH 217
           GSL F R+ ++  +H
Sbjct: 193 GSLFFPRKTESNGVH 207



 Score =  107 bits (268), Expect(2) = 3e-61
 Identities = 45/58 (77%), Positives = 53/58 (91%)
 Frame = -2

Query: 871 MAEASDQATSICNHCNRDIPSSNIDLHYAHCSRNLEKCEVCGDMVPKKYAEEHFLSTH 698
           MA AS++ TSICNHC RDIPSSNIDLH  HC+RNLEKC++CGDMVPK++AEEHFL+TH
Sbjct: 1   MAVASEETTSICNHCGRDIPSSNIDLHSVHCARNLEKCKICGDMVPKRHAEEHFLNTH 58


Top