BLASTX nr result

ID: Bupleurum21_contig00006943 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00006943
         (1577 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281428.1| PREDICTED: AP-3 complex subunit mu-1 [Vitis ...   728   0.0  
gb|ADC53238.1| clathrin-associated adaptor complexes medium subu...   707   0.0  
ref|NP_001242747.1| uncharacterized protein LOC100799191 [Glycin...   702   0.0  
ref|XP_003521657.1| PREDICTED: AP-3 complex subunit mu-1-like [G...   702   0.0  
ref|XP_002512538.1| clathrin coat adaptor ap3 medium chain, puta...   702   0.0  

>ref|XP_002281428.1| PREDICTED: AP-3 complex subunit mu-1 [Vitis vinifera]
            gi|296089804|emb|CBI39623.3| unnamed protein product
            [Vitis vinifera]
          Length = 415

 Score =  728 bits (1880), Expect = 0.0
 Identities = 350/415 (84%), Positives = 388/415 (93%)
 Frame = -3

Query: 1569 MLQCIFLLSDSGEIILEKQLSGHRVDRSICAWYWEHAISQGDTFKLVPVIASPTHYLFQI 1390
            MLQCIFLLSDSGE++LEKQL+GHRVDRSIC W+WE  +SQ D+ KL PVIASPTHY+FQI
Sbjct: 1    MLQCIFLLSDSGEVMLEKQLTGHRVDRSICDWFWEQTVSQADSTKLPPVIASPTHYIFQI 60

Query: 1389 VRDNITFLACTQVEMPPLMAIEFLCRVADLLSNYLAGLNEDLIKDNFVIVYELLDEMIDN 1210
             R+ ITFLACTQVEMPPLM IEFLCRVAD+LS+YL GLNED+IKDNFVIVYELLDEMIDN
Sbjct: 61   TREGITFLACTQVEMPPLMGIEFLCRVADVLSDYLGGLNEDVIKDNFVIVYELLDEMIDN 120

Query: 1209 GFPLTTEPNILREMIAPPNIVSKMLSVVTGNSSNMSNTLPGATASCVPWRTTGLKHASNE 1030
            GFPLTTEPNILREMIA PNIVSK+L VVTGNSSN+SNTLPGATASCVPWR+T  KHA+NE
Sbjct: 121  GFPLTTEPNILREMIALPNIVSKVLGVVTGNSSNVSNTLPGATASCVPWRSTEPKHANNE 180

Query: 1029 VYVDLVEEMDAVINRDGVLVKCEIYGEVQVNCHLSGLPDLTLSFGNPSILNDVRFHPCVR 850
            VYVDL+EEMDAVINRDG+LVKCEIYGEV+VN HLSGLPDLTLSF NPSILNDVRFHPCVR
Sbjct: 181  VYVDLLEEMDAVINRDGILVKCEIYGEVEVNSHLSGLPDLTLSFANPSILNDVRFHPCVR 240

Query: 849  FRPWESNQTLSFVPPDGQFKLMSYRVKKLKNTPIYVKPQLSSDSGTCRINVLVGTRNDPG 670
            FRPWESN  LSFVPPDGQFKLMSYRVKKL++TPIYVKPQL+SD+GTCR++VLVG R+DPG
Sbjct: 241  FRPWESNNILSFVPPDGQFKLMSYRVKKLRSTPIYVKPQLTSDAGTCRLSVLVGIRSDPG 300

Query: 669  KTVDSIDVQFQLPPCILSADLTSNHGTVNILANKTCCWSIGRIPKDKAPSLSGTLNLETG 490
            KT+DS+ VQFQLPPCILSA+L+SNHGTV+ILANKTC WSIGRIPKDKAPSLSGTL LETG
Sbjct: 301  KTIDSVTVQFQLPPCILSANLSSNHGTVSILANKTCSWSIGRIPKDKAPSLSGTLTLETG 360

Query: 489  LERLHVSLNFQVSFKIMGVALSGLKIDNLDIKNLPARPYKGFRAVTRAGKYDVRS 325
            +ERLHV   FQV F+IMGVALSGL+ID LDIKNLP+RPYKGFRA+T+AG+Y+VRS
Sbjct: 361  MERLHVFPTFQVGFRIMGVALSGLQIDTLDIKNLPSRPYKGFRALTQAGQYEVRS 415


>gb|ADC53238.1| clathrin-associated adaptor complexes medium subunit [Gossypium
            hirsutum]
          Length = 415

 Score =  707 bits (1826), Expect = 0.0
 Identities = 338/415 (81%), Positives = 380/415 (91%)
 Frame = -3

Query: 1569 MLQCIFLLSDSGEIILEKQLSGHRVDRSICAWYWEHAISQGDTFKLVPVIASPTHYLFQI 1390
            MLQCIFLLSDSGE++LEKQL+GHRVDRSIC W+W+H ISQGD+FK  PVIASPTHYLFQ+
Sbjct: 1    MLQCIFLLSDSGEVMLEKQLTGHRVDRSICDWFWDHVISQGDSFKSQPVIASPTHYLFQV 60

Query: 1389 VRDNITFLACTQVEMPPLMAIEFLCRVADLLSNYLAGLNEDLIKDNFVIVYELLDEMIDN 1210
            VR+ ITFLACTQVEMPPLM IEFLCRV+D+LS+YL GLNED+IKDNFVIVYELLDEMIDN
Sbjct: 61   VREGITFLACTQVEMPPLMGIEFLCRVSDVLSDYLGGLNEDVIKDNFVIVYELLDEMIDN 120

Query: 1209 GFPLTTEPNILREMIAPPNIVSKMLSVVTGNSSNMSNTLPGATASCVPWRTTGLKHASNE 1030
            GFPLTTE NILREMIAPPNIVSK+LSVVTGNSSN+S+TLPGAT SC+PWR    K+A+NE
Sbjct: 121  GFPLTTEANILREMIAPPNIVSKVLSVVTGNSSNVSDTLPGATRSCIPWRAAEPKYANNE 180

Query: 1029 VYVDLVEEMDAVINRDGVLVKCEIYGEVQVNCHLSGLPDLTLSFGNPSILNDVRFHPCVR 850
            VYVDLVEEMDAVINRDG LVKCE+YGEV+VN HLSGLPDLTLSF NPSIL+DVRFHPCVR
Sbjct: 181  VYVDLVEEMDAVINRDGALVKCEVYGEVRVNSHLSGLPDLTLSFANPSILDDVRFHPCVR 240

Query: 849  FRPWESNQTLSFVPPDGQFKLMSYRVKKLKNTPIYVKPQLSSDSGTCRINVLVGTRNDPG 670
            FRPWES+Q LSFVPPDG+FKLMSYR+KKLK+TP+YVKPQL+SD+G CR+NVLVG RNDPG
Sbjct: 241  FRPWESHQVLSFVPPDGEFKLMSYRIKKLKSTPLYVKPQLTSDAGKCRVNVLVGIRNDPG 300

Query: 669  KTVDSIDVQFQLPPCILSADLTSNHGTVNILANKTCCWSIGRIPKDKAPSLSGTLNLETG 490
            KT+DSI ++FQLPPCILSADL SNHGTVNIL NK C W+IGRIPKDK PSLSGTL LET 
Sbjct: 301  KTIDSITLEFQLPPCILSADLNSNHGTVNILGNKICSWTIGRIPKDKTPSLSGTLLLETE 360

Query: 489  LERLHVSLNFQVSFKIMGVALSGLKIDNLDIKNLPARPYKGFRAVTRAGKYDVRS 325
            LERLHV   F+V F+IMGVALSGL+ID LD+K  P+R YKGFRA+TRAG+++VRS
Sbjct: 361  LERLHVFPTFRVGFRIMGVALSGLQIDKLDLKTAPSRLYKGFRALTRAGEFEVRS 415


>ref|NP_001242747.1| uncharacterized protein LOC100799191 [Glycine max]
            gi|255641304|gb|ACU20929.1| unknown [Glycine max]
          Length = 415

 Score =  702 bits (1812), Expect = 0.0
 Identities = 339/415 (81%), Positives = 381/415 (91%)
 Frame = -3

Query: 1569 MLQCIFLLSDSGEIILEKQLSGHRVDRSICAWYWEHAISQGDTFKLVPVIASPTHYLFQI 1390
            MLQCIFLLSDSGE++LEKQLSGHRVDRSICAW+W+ AISQ D FK  PVIASPTHYLFQ+
Sbjct: 1    MLQCIFLLSDSGEVMLEKQLSGHRVDRSICAWFWDQAISQPDPFKQQPVIASPTHYLFQV 60

Query: 1389 VRDNITFLACTQVEMPPLMAIEFLCRVADLLSNYLAGLNEDLIKDNFVIVYELLDEMIDN 1210
             R+ ITFLACTQVEMPPLMAIEFLCRVAD+L++YL GLNEDLIKDNFVIVYELLDEMIDN
Sbjct: 61   FREGITFLACTQVEMPPLMAIEFLCRVADVLNDYLGGLNEDLIKDNFVIVYELLDEMIDN 120

Query: 1209 GFPLTTEPNILREMIAPPNIVSKMLSVVTGNSSNMSNTLPGATASCVPWRTTGLKHASNE 1030
            GFPLTTEPNIL+EMIAPPNIVSK+LSVVTG+SSN+S+TLP ATAS VPWRT   K+A+NE
Sbjct: 121  GFPLTTEPNILQEMIAPPNIVSKVLSVVTGSSSNVSDTLPVATASLVPWRTADTKYANNE 180

Query: 1029 VYVDLVEEMDAVINRDGVLVKCEIYGEVQVNCHLSGLPDLTLSFGNPSILNDVRFHPCVR 850
            VYVDLVEEMDA INRDGVLVKCEI GEVQVN H++GLPDLTLSF NPSIL+DVRFHPCVR
Sbjct: 181  VYVDLVEEMDATINRDGVLVKCEINGEVQVNSHITGLPDLTLSFANPSILDDVRFHPCVR 240

Query: 849  FRPWESNQTLSFVPPDGQFKLMSYRVKKLKNTPIYVKPQLSSDSGTCRINVLVGTRNDPG 670
            ++PWESNQ LSFVPPDGQFKLMSYR++KLKNTPIYVKPQL+SD G CR+++LVG RNDPG
Sbjct: 241  YQPWESNQILSFVPPDGQFKLMSYRIRKLKNTPIYVKPQLTSDGGACRVSILVGIRNDPG 300

Query: 669  KTVDSIDVQFQLPPCILSADLTSNHGTVNILANKTCCWSIGRIPKDKAPSLSGTLNLETG 490
            KT+D++ +QFQLP CILSADLTSN+G VNILANKTC WSIGRIPKDKAPS+SGTL LETG
Sbjct: 301  KTIDNVTLQFQLPSCILSADLTSNYGIVNILANKTCSWSIGRIPKDKAPSMSGTLVLETG 360

Query: 489  LERLHVSLNFQVSFKIMGVALSGLKIDNLDIKNLPARPYKGFRAVTRAGKYDVRS 325
            L+RLHV   FQV F+IMGVALSGL+ID LD+K +P R YKGFRA+TRAG+++VRS
Sbjct: 361  LDRLHVFPTFQVGFRIMGVALSGLQIDKLDLKTVPYRFYKGFRALTRAGEFEVRS 415


>ref|XP_003521657.1| PREDICTED: AP-3 complex subunit mu-1-like [Glycine max]
          Length = 415

 Score =  702 bits (1811), Expect = 0.0
 Identities = 340/415 (81%), Positives = 380/415 (91%)
 Frame = -3

Query: 1569 MLQCIFLLSDSGEIILEKQLSGHRVDRSICAWYWEHAISQGDTFKLVPVIASPTHYLFQI 1390
            MLQCIFLLSDSGE++LEKQLSGHRVDRSICAW+W+ AISQ D+FK  PVIASPTHYLFQ+
Sbjct: 1    MLQCIFLLSDSGEVMLEKQLSGHRVDRSICAWFWDQAISQPDSFKQQPVIASPTHYLFQV 60

Query: 1389 VRDNITFLACTQVEMPPLMAIEFLCRVADLLSNYLAGLNEDLIKDNFVIVYELLDEMIDN 1210
             R+ ITFLACTQVEMPPLMAIEFLCRVAD+L++YL GLNEDLIKDNF+IVYELLDEMIDN
Sbjct: 61   FREGITFLACTQVEMPPLMAIEFLCRVADVLNDYLGGLNEDLIKDNFIIVYELLDEMIDN 120

Query: 1209 GFPLTTEPNILREMIAPPNIVSKMLSVVTGNSSNMSNTLPGATASCVPWRTTGLKHASNE 1030
            GFPLTTEPNIL+EMIAPPNIVSK+LSVVTG+SSN+S+TLPGATAS VPWRT   K+A+NE
Sbjct: 121  GFPLTTEPNILQEMIAPPNIVSKVLSVVTGSSSNVSDTLPGATASLVPWRTADTKYANNE 180

Query: 1029 VYVDLVEEMDAVINRDGVLVKCEIYGEVQVNCHLSGLPDLTLSFGNPSILNDVRFHPCVR 850
            VYVDLVEEMDA INRDGVLVKCEI GEVQVN H++GLPDLTLSF NPSIL+DVRFHPCVR
Sbjct: 181  VYVDLVEEMDATINRDGVLVKCEINGEVQVNSHITGLPDLTLSFANPSILDDVRFHPCVR 240

Query: 849  FRPWESNQTLSFVPPDGQFKLMSYRVKKLKNTPIYVKPQLSSDSGTCRINVLVGTRNDPG 670
            +RPWESNQ LSFVPPDG+FKLMSYRV KLKNTPIYVKPQ +SD G CR++VLVG RNDPG
Sbjct: 241  YRPWESNQILSFVPPDGRFKLMSYRVGKLKNTPIYVKPQFTSDGGRCRVSVLVGIRNDPG 300

Query: 669  KTVDSIDVQFQLPPCILSADLTSNHGTVNILANKTCCWSIGRIPKDKAPSLSGTLNLETG 490
            KT+D++ VQFQLP CILSADL+SN+G VNILANK C WSIGRIPKDKAPS+SGTL LETG
Sbjct: 301  KTIDNVTVQFQLPSCILSADLSSNYGIVNILANKICSWSIGRIPKDKAPSMSGTLVLETG 360

Query: 489  LERLHVSLNFQVSFKIMGVALSGLKIDNLDIKNLPARPYKGFRAVTRAGKYDVRS 325
            LERLHV   FQV F+IMGVALSGL+ID LD+K +P R YKGFRA+TRAG+++VRS
Sbjct: 361  LERLHVFPTFQVGFRIMGVALSGLQIDKLDLKTVPYRFYKGFRALTRAGEFEVRS 415


>ref|XP_002512538.1| clathrin coat adaptor ap3 medium chain, putative [Ricinus communis]
            gi|223548499|gb|EEF49990.1| clathrin coat adaptor ap3
            medium chain, putative [Ricinus communis]
          Length = 415

 Score =  702 bits (1811), Expect = 0.0
 Identities = 341/415 (82%), Positives = 379/415 (91%)
 Frame = -3

Query: 1569 MLQCIFLLSDSGEIILEKQLSGHRVDRSICAWYWEHAISQGDTFKLVPVIASPTHYLFQI 1390
            MLQCIFLLSD GE+ILEKQL+GHRVDRSIC W+W  AISQ D+FK   VIASPTHYLFQI
Sbjct: 1    MLQCIFLLSDCGEVILEKQLTGHRVDRSICDWFWNQAISQDDSFKQQSVIASPTHYLFQI 60

Query: 1389 VRDNITFLACTQVEMPPLMAIEFLCRVADLLSNYLAGLNEDLIKDNFVIVYELLDEMIDN 1210
            VR+ ITFLACTQVEMPPLMAIEFLCRVA++LS+YL GLNEDLIKDNFVIVYELLDEMIDN
Sbjct: 61   VREGITFLACTQVEMPPLMAIEFLCRVANILSDYLEGLNEDLIKDNFVIVYELLDEMIDN 120

Query: 1209 GFPLTTEPNILREMIAPPNIVSKMLSVVTGNSSNMSNTLPGATASCVPWRTTGLKHASNE 1030
            GFPLTTEPNILREMIAPPNIVSKMLSVVTGNSSN+S+TLP AT+SCVPWRTT +K+A+NE
Sbjct: 121  GFPLTTEPNILREMIAPPNIVSKMLSVVTGNSSNVSDTLPNATSSCVPWRTTDVKYANNE 180

Query: 1029 VYVDLVEEMDAVINRDGVLVKCEIYGEVQVNCHLSGLPDLTLSFGNPSILNDVRFHPCVR 850
            VYVDLVEEMDA+INRDGVL+KCEIYGE+QVN H++G+PDLTLSF NPSIL+DVRFHPCVR
Sbjct: 181  VYVDLVEEMDAIINRDGVLMKCEIYGELQVNSHITGVPDLTLSFTNPSILDDVRFHPCVR 240

Query: 849  FRPWESNQTLSFVPPDGQFKLMSYRVKKLKNTPIYVKPQLSSDSGTCRINVLVGTRNDPG 670
            FRPWES+Q LSFVPPDG FKLMSYRVKKLK  PIYVKPQL+SD+GTCRIN++VG +NDPG
Sbjct: 241  FRPWESHQILSFVPPDGLFKLMSYRVKKLKTVPIYVKPQLTSDAGTCRINLMVGIKNDPG 300

Query: 669  KTVDSIDVQFQLPPCILSADLTSNHGTVNILANKTCCWSIGRIPKDKAPSLSGTLNLETG 490
            K +DSI+VQF LPPCILSADLTSNHG VN+L+NK C WSI RIPKDK PSLSGTL LETG
Sbjct: 301  KMIDSINVQFHLPPCILSADLTSNHGVVNVLSNKMCVWSIDRIPKDKTPSLSGTLVLETG 360

Query: 489  LERLHVSLNFQVSFKIMGVALSGLKIDNLDIKNLPARPYKGFRAVTRAGKYDVRS 325
            LERLHV   FQ+SF+I GVALSGL+ID LD+K +P R YKGFRA+TRAG Y+VRS
Sbjct: 361  LERLHVFPIFQLSFRIQGVALSGLQIDKLDLKVVPNRLYKGFRALTRAGLYEVRS 415


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