BLASTX nr result

ID: Bupleurum21_contig00006927 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00006927
         (1090 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN80935.1| hypothetical protein VITISV_005661 [Vitis vinifera]   335   1e-89
ref|XP_003631342.1| PREDICTED: inactive leucine-rich repeat rece...   334   3e-89
ref|XP_002311575.1| predicted protein [Populus trichocarpa] gi|2...   326   7e-87
ref|XP_002518813.1| receptor-kinase, putative [Ricinus communis]...   323   3e-86
ref|XP_002315819.1| predicted protein [Populus trichocarpa] gi|2...   318   1e-84

>emb|CAN80935.1| hypothetical protein VITISV_005661 [Vitis vinifera]
          Length = 695

 Score =  335 bits (859), Expect = 1e-89
 Identities = 170/270 (62%), Positives = 210/270 (77%), Gaps = 5/270 (1%)
 Frame = +3

Query: 279  SDDLEALLGLKSSIDPLNSLQWSGENVCKWSGVKECLRGRVTKLVLEHLNLSGTLDERSL 458
            S D E LL LKS IDP NSLQW G + CKW GVKEC+RGRVTKLVLEHLNL+GTLDE+SL
Sbjct: 22   SGDGETLLALKSWIDPSNSLQWRGSDFCKWQGVKECMRGRVTKLVLEHLNLNGTLDEKSL 81

Query: 459  NKLDQLRVLSFKDNSISGQIPNLSGLSNLKSLFLNENNFSGDFPASISGLHRLKVVVLSQ 638
             +LDQLRVLSFK+NS+SGQIP+LSGL NLKSLFLN NNFSGDFP+S+SGLHRLKV++L+ 
Sbjct: 82   AQLDQLRVLSFKENSLSGQIPDLSGLINLKSLFLNNNNFSGDFPSSLSGLHRLKVIILAG 141

Query: 639  NQISGEIPAAVLNIRRLYVLYLEDNLLTGPIPGFNQTGLKFLNVSNNQLSGEIPATPVLV 818
            NQISG+IPA++L ++RLY+LYL+DN LTG IP  NQT L+F NVSNNQLSGEIP TP LV
Sbjct: 142  NQISGQIPASLLKLQRLYILYLQDNRLTGEIPPLNQTSLRFFNVSNNQLSGEIPLTPALV 201

Query: 819  RFNLSSFSGNVNLCGDQINIPCNKTSSGVPPAMTPKISIEP----EKKHRKNKKIIWVVA 986
            RFN SSFS N+ LCG+Q+N PC ++     PA++P+    P      KH    K I ++A
Sbjct: 202  RFNQSSFSNNLELCGEQVNSPCPRS-----PAISPESPTVPTPSSSSKHSNRTKRIKIIA 256

Query: 987  GSI-GGFLVLCILVGLLAFCLKNRKKNEPR 1073
            GS+ GG L++C+++  +++    RK  E R
Sbjct: 257  GSVGGGVLLICLILLCVSYRRMRRKTVEGR 286


>ref|XP_003631342.1| PREDICTED: inactive leucine-rich repeat receptor-like
            serine/threonine-protein kinase At1g60630-like [Vitis
            vinifera]
          Length = 662

 Score =  334 bits (856), Expect = 3e-89
 Identities = 169/270 (62%), Positives = 210/270 (77%), Gaps = 5/270 (1%)
 Frame = +3

Query: 279  SDDLEALLGLKSSIDPLNSLQWSGENVCKWSGVKECLRGRVTKLVLEHLNLSGTLDERSL 458
            S D E LL LKS IDP NSLQW G + CKW GVKEC+RGRVTKLVLEHLNL+GTLDE+SL
Sbjct: 31   SGDGETLLALKSWIDPSNSLQWRGSDFCKWQGVKECMRGRVTKLVLEHLNLNGTLDEKSL 90

Query: 459  NKLDQLRVLSFKDNSISGQIPNLSGLSNLKSLFLNENNFSGDFPASISGLHRLKVVVLSQ 638
             +LDQLRVLSFK+NS+SGQIP+LSGL NLKSLFLN NNFSGDFP+S+SGLHRLKV++L+ 
Sbjct: 91   AQLDQLRVLSFKENSLSGQIPDLSGLINLKSLFLNNNNFSGDFPSSLSGLHRLKVIILAG 150

Query: 639  NQISGEIPAAVLNIRRLYVLYLEDNLLTGPIPGFNQTGLKFLNVSNNQLSGEIPATPVLV 818
            NQISG+IPA++L ++RLY+LYL+DN LTG IP  NQT L+F NVSNNQLSGEIP TP +V
Sbjct: 151  NQISGQIPASLLKLQRLYILYLQDNRLTGEIPPLNQTSLRFFNVSNNQLSGEIPLTPAVV 210

Query: 819  RFNLSSFSGNVNLCGDQINIPCNKTSSGVPPAMTPKISIEP----EKKHRKNKKIIWVVA 986
            RFN SSFS N+ LCG+Q+N PC ++     PA++P+    P      KH    K I ++A
Sbjct: 211  RFNQSSFSNNLELCGEQVNSPCPRS-----PAISPESPTVPTPSSSSKHSNRTKRIKIIA 265

Query: 987  GSI-GGFLVLCILVGLLAFCLKNRKKNEPR 1073
            GS+ GG L++C+++  +++    RK  E R
Sbjct: 266  GSVGGGVLLICLILLCVSYRRMRRKTVEGR 295


>ref|XP_002311575.1| predicted protein [Populus trichocarpa] gi|222851395|gb|EEE88942.1|
            predicted protein [Populus trichocarpa]
          Length = 657

 Score =  326 bits (835), Expect = 7e-87
 Identities = 172/266 (64%), Positives = 202/266 (75%), Gaps = 3/266 (1%)
 Frame = +3

Query: 279  SDDLEALLGLKSSIDPLNSLQWS-GENVCKWSGVKECLRGRVTKLVLEHLNLSGTLDERS 455
            S D EALL LKS+IDPLNSL W  G NVCKW GVKEC  GRVTKLV+E+ NLSGTLD + 
Sbjct: 28   SGDAEALLTLKSAIDPLNSLSWQQGINVCKWQGVKECKNGRVTKLVVEYQNLSGTLDAKI 87

Query: 456  LNKLDQLRVLSFKDNSISGQIPNLSGLSNLKSLFLNENNFSGDFPASISGLHRLKVVVLS 635
            LN+LDQLRVLSFK NS+SGQIP+LSGL NLKSLFL  NNFS DFP SI+GLHRLKV+VL+
Sbjct: 88   LNQLDQLRVLSFKGNSLSGQIPSLSGLVNLKSLFLQTNNFSSDFPDSITGLHRLKVIVLA 147

Query: 636  QNQISGEIPAAVLNIRRLYVLYLEDNLLTGPIPGFNQTGLKFLNVSNNQLSGEIPATPVL 815
            QNQISG IPA++L + RLYVLYLEDN  TG IP  NQT L+F NVSNNQLSG+IP T  L
Sbjct: 148  QNQISGPIPASLLKLSRLYVLYLEDNKFTGAIPPLNQTSLRFFNVSNNQLSGQIPVTSSL 207

Query: 816  VRFNLSSFSGNVNLCGDQINIPCNKTSSGVPPAMTPKISIEPEKKHRKNKKIIWVVAGSI 995
            +RFN SSF GN+NLCG+QI  PCN  + G  P+ T   S +P   H    KII +VAGS+
Sbjct: 208  IRFNTSSFIGNLNLCGEQIQNPCNNLNLGPSPSPTSPTS-KPSSNH---SKIIKIVAGSV 263

Query: 996  GGFL--VLCILVGLLAFCLKNRKKNE 1067
            GGF+  ++C+L+    FC ++  K E
Sbjct: 264  GGFMFVIICLLLA-RCFCFEDGPKKE 288


>ref|XP_002518813.1| receptor-kinase, putative [Ricinus communis]
            gi|223542194|gb|EEF43738.1| receptor-kinase, putative
            [Ricinus communis]
          Length = 663

 Score =  323 bits (829), Expect = 3e-86
 Identities = 166/268 (61%), Positives = 203/268 (75%), Gaps = 6/268 (2%)
 Frame = +3

Query: 276  SSDDLEALLGLKSSIDPLNSLQW-SGENVCKWSGVKECLRGRVTKLVLEHLNLSGTLDER 452
            +S D EALL LKSSIDP NSL W  G + CKW G+KEC+ GRVTKLVLE+LNL GTLD +
Sbjct: 23   TSSDAEALLTLKSSIDPSNSLPWPQGSDACKWRGIKECMNGRVTKLVLEYLNLRGTLDAK 82

Query: 453  SLNKLDQLRVLSFKDNSISGQIPNLSGLSNLKSLFLNENNFSGDFPASISGLHRLKVVVL 632
            +LN+LDQLRVLSFK NSISGQIP+LSGL NLKSLFLN NNFSG+FP SI+ LHRLKVVVL
Sbjct: 83   TLNQLDQLRVLSFKGNSISGQIPSLSGLVNLKSLFLNSNNFSGNFPDSITSLHRLKVVVL 142

Query: 633  SQNQISGEIPAAVLNIRRLYVLYLEDNLLTGPIPGFNQTGLKFLNVSNNQLSGEIPATPV 812
            + NQISG +P ++L + RLYVL L+DN  TGPIP  NQT L+F NVSNN+LSGEIP TP 
Sbjct: 143  ADNQISGPLPVSLLKLARLYVLNLQDNRFTGPIPPLNQTSLRFFNVSNNELSGEIPVTPA 202

Query: 813  LVRFNLSSFSGNVNLCGDQINIPCNKTSSGVPPAMT--PKISIEPEKKHRKNKKIIWVVA 986
            L+RFN SSFSGNV++CG+QI  PC+    G PPA    P+      K   K  K+I ++ 
Sbjct: 203  LIRFNTSSFSGNVDICGEQIGNPCSNREFG-PPASPAYPRDREGGSKSSSKRSKLIKIIV 261

Query: 987  GSIGGFLVLCILVGLLAFCL---KNRKK 1061
            G++GGFLV+C+L+ +    +   +NRK+
Sbjct: 262  GTVGGFLVVCLLITICLIRMHRGRNRKE 289


>ref|XP_002315819.1| predicted protein [Populus trichocarpa] gi|222864859|gb|EEF01990.1|
            predicted protein [Populus trichocarpa]
          Length = 661

 Score =  318 bits (816), Expect = 1e-84
 Identities = 168/266 (63%), Positives = 198/266 (74%), Gaps = 3/266 (1%)
 Frame = +3

Query: 279  SDDLEALLGLKSSIDPLNSLQWS-GENVCKWSGVKECLRGRVTKLVLEHLNLSGTLDERS 455
            S D EALL LKS+IDPLN L W  G NVCKW GVKEC  GRVTKLV+E+ N SGTLD + 
Sbjct: 28   SGDAEALLTLKSAIDPLNFLPWQHGTNVCKWQGVKECKNGRVTKLVVEYQNQSGTLDAKI 87

Query: 456  LNKLDQLRVLSFKDNSISGQIPNLSGLSNLKSLFLNENNFSGDFPASISGLHRLKVVVLS 635
            LN+LDQLRVLSFK NS+SGQIPNLSGL NLKSLFL+ NNFSGDFP SI+GLHRLKV+VL+
Sbjct: 88   LNQLDQLRVLSFKGNSLSGQIPNLSGLVNLKSLFLDSNNFSGDFPDSITGLHRLKVIVLA 147

Query: 636  QNQISGEIPAAVLNIRRLYVLYLEDNLLTGPIPGFNQTGLKFLNVSNNQLSGEIPATPVL 815
            +NQISG IP ++LN+ RLY LYLEDN  TG IP  NQT L+F NVSNN+LSG+IP TP L
Sbjct: 148  RNQISGPIPVSILNLSRLYALYLEDNNFTGSIPPLNQTSLRFFNVSNNKLSGQIPVTPPL 207

Query: 816  VRFNLSSFSGNVNLCGDQINIPCNKTSSGVPPAMTPKISIEPEKKHRKNKKIIWVVAGSI 995
            +RFN  SF GN+NLCG QI  PCN  + G  P+++P  +    K   K  K I +VA + 
Sbjct: 208  IRFNTPSFIGNLNLCGVQIQNPCNNLNFG--PSLSP--TYPSSKPTSKRSKTIKIVAATA 263

Query: 996  GG--FLVLCILVGLLAFCLKNRKKNE 1067
            GG  FL+ C+L+ +  FC KN  K E
Sbjct: 264  GGFVFLITCLLL-VCCFCFKNGNKKE 288


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