BLASTX nr result

ID: Bupleurum21_contig00006917 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00006917
         (784 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316177.1| tubulin gamma complex-associated protein [Po...   420   e-115
ref|XP_003548617.1| PREDICTED: gamma-tubulin complex component 2...   417   e-114
ref|XP_002273947.2| PREDICTED: gamma-tubulin complex component 2...   416   e-114
ref|XP_003520343.1| PREDICTED: gamma-tubulin complex component 2...   416   e-114
emb|CBI34898.3| unnamed protein product [Vitis vinifera]              416   e-114

>ref|XP_002316177.1| tubulin gamma complex-associated protein [Populus trichocarpa]
           gi|222865217|gb|EEF02348.1| tubulin gamma
           complex-associated protein [Populus trichocarpa]
          Length = 711

 Score =  420 bits (1079), Expect = e-115
 Identities = 213/260 (81%), Positives = 227/260 (87%)
 Frame = +3

Query: 3   GRLSIQGLWFYCQPMMGSMQSLSIVVKKASANSIVGSAVLNLLQSQAKAMAGDHIVRSLL 182
           GRLSIQGLWFYCQPMMGSMQ+LSIV++KASAN+  GS+VLNLLQSQAKAMAGD+ VRSLL
Sbjct: 171 GRLSIQGLWFYCQPMMGSMQALSIVIQKASANNFTGSSVLNLLQSQAKAMAGDNAVRSLL 230

Query: 183 EKMIQSASSAYLVILERWVYEGVIDDPHGEFFIAEDKSLQKESLSQDYDAKYWRQRYSLK 362
           EKM Q AS+AYL ILERWVYEGVIDDP+GEFFIAE+KSLQKESL+QDYDAKYWRQRYSLK
Sbjct: 231 EKMTQCASNAYLSILERWVYEGVIDDPYGEFFIAENKSLQKESLTQDYDAKYWRQRYSLK 290

Query: 363 DEIPSFLANAAETILTTGKYLNVMRECGHTIQVPLSGNTKLMSSGSSHHYLECIKAAYDF 542
           + IPSFLAN A TILTTGKYLNVMRECGH +QVP S N KL   GS+HHYLECIKAAYDF
Sbjct: 291 EGIPSFLANIAGTILTTGKYLNVMRECGHNVQVPASENYKLTIFGSNHHYLECIKAAYDF 350

Query: 543 SSSELLNLIKEKYDLMGKLRSIKHYLLLDQGDFLVHFMDIARDELFKKPDEISVEKLQSX 722
           +S ELLNLIKEKYDLMGKLRSIKHYLLLDQGDFLVHFMDIARDEL KK DEISVEKLQS 
Sbjct: 351 ASGELLNLIKEKYDLMGKLRSIKHYLLLDQGDFLVHFMDIARDELTKKFDEISVEKLQSL 410

Query: 723 XXXXXXXXXXXSDPFHEDLT 782
                       DP HEDLT
Sbjct: 411 LDLALRTTAAAVDPCHEDLT 430


>ref|XP_003548617.1| PREDICTED: gamma-tubulin complex component 2-like [Glycine max]
          Length = 664

 Score =  417 bits (1071), Expect = e-114
 Identities = 207/260 (79%), Positives = 227/260 (87%)
 Frame = +3

Query: 3   GRLSIQGLWFYCQPMMGSMQSLSIVVKKASANSIVGSAVLNLLQSQAKAMAGDHIVRSLL 182
           GRLS+QGLWFYCQPMM SMQ+LS V++KAS N+I GSAVLNLLQSQAKAMAGD+ VR +L
Sbjct: 126 GRLSLQGLWFYCQPMMRSMQALSTVIQKASVNNISGSAVLNLLQSQAKAMAGDNAVRMML 185

Query: 183 EKMIQSASSAYLVILERWVYEGVIDDPHGEFFIAEDKSLQKESLSQDYDAKYWRQRYSLK 362
           EKM Q ASSAY+ ILERWVYEG+IDDP+GEFFIAEDKSLQKESL+QDY+AKYWRQRYSLK
Sbjct: 186 EKMTQCASSAYMSILERWVYEGIIDDPYGEFFIAEDKSLQKESLTQDYEAKYWRQRYSLK 245

Query: 363 DEIPSFLANAAETILTTGKYLNVMRECGHTIQVPLSGNTKLMSSGSSHHYLECIKAAYDF 542
           D IPSFL N A TILTTGKYLNVMRECGH +QVP S N+KLMS GS+HHYLECIKAAY+F
Sbjct: 246 DGIPSFLENIAGTILTTGKYLNVMRECGHNVQVPPSENSKLMSFGSNHHYLECIKAAYNF 305

Query: 543 SSSELLNLIKEKYDLMGKLRSIKHYLLLDQGDFLVHFMDIARDELFKKPDEISVEKLQSX 722
           +S ELLNLIKEKYDL G+LRSIKHYLLLDQGDFLVHFMDIARDEL KKPDE+SVEKLQS 
Sbjct: 306 ASGELLNLIKEKYDLTGRLRSIKHYLLLDQGDFLVHFMDIARDELAKKPDEVSVEKLQSL 365

Query: 723 XXXXXXXXXXXSDPFHEDLT 782
                      +DPFHE LT
Sbjct: 366 LDLALRTTAAAADPFHEGLT 385


>ref|XP_002273947.2| PREDICTED: gamma-tubulin complex component 2-like [Vitis vinifera]
          Length = 681

 Score =  416 bits (1070), Expect = e-114
 Identities = 210/260 (80%), Positives = 229/260 (88%)
 Frame = +3

Query: 3   GRLSIQGLWFYCQPMMGSMQSLSIVVKKASANSIVGSAVLNLLQSQAKAMAGDHIVRSLL 182
           GRLSIQGLWFYCQPMMGSM +LS V+ KASAN+ +GSAVLNLLQSQAKAMAGD+ VRSLL
Sbjct: 164 GRLSIQGLWFYCQPMMGSMLALSTVIHKASANNFMGSAVLNLLQSQAKAMAGDNAVRSLL 223

Query: 183 EKMIQSASSAYLVILERWVYEGVIDDPHGEFFIAEDKSLQKESLSQDYDAKYWRQRYSLK 362
           EKM Q ASSAYL ILERWVYEGVIDDP+GEFFIAE+KSLQKESL+QDYDAKYW QRYSLK
Sbjct: 224 EKMTQCASSAYLGILERWVYEGVIDDPYGEFFIAENKSLQKESLTQDYDAKYWGQRYSLK 283

Query: 363 DEIPSFLANAAETILTTGKYLNVMRECGHTIQVPLSGNTKLMSSGSSHHYLECIKAAYDF 542
           D IPSFLANAA TILTTGKYLNVMRECGH +QVP S ++K +S GS+HHYLECIKAAY+F
Sbjct: 284 DGIPSFLANAAGTILTTGKYLNVMRECGHNVQVPASEDSKFISFGSNHHYLECIKAAYEF 343

Query: 543 SSSELLNLIKEKYDLMGKLRSIKHYLLLDQGDFLVHFMDIARDELFKKPDEISVEKLQSX 722
           SS+ELLNLIKEKYDL+GKLRSIKHYLLLDQGDFLVHFMDIARDEL K+ D+ISVEKLQS 
Sbjct: 344 SSTELLNLIKEKYDLLGKLRSIKHYLLLDQGDFLVHFMDIARDELAKRLDDISVEKLQSL 403

Query: 723 XXXXXXXXXXXSDPFHEDLT 782
                      +DP HEDLT
Sbjct: 404 LDLALRTTAAAADPCHEDLT 423


>ref|XP_003520343.1| PREDICTED: gamma-tubulin complex component 2-like [Glycine max]
          Length = 827

 Score =  416 bits (1070), Expect = e-114
 Identities = 207/260 (79%), Positives = 227/260 (87%)
 Frame = +3

Query: 3   GRLSIQGLWFYCQPMMGSMQSLSIVVKKASANSIVGSAVLNLLQSQAKAMAGDHIVRSLL 182
           GRLS+QGLWFYCQPMM SMQ LS V+++AS N+I GSAVLNLLQSQAKAMAGD+ VR +L
Sbjct: 209 GRLSLQGLWFYCQPMMRSMQGLSTVIQRASVNNISGSAVLNLLQSQAKAMAGDNAVRMML 268

Query: 183 EKMIQSASSAYLVILERWVYEGVIDDPHGEFFIAEDKSLQKESLSQDYDAKYWRQRYSLK 362
           EKM Q ASSAY+ ILERWVYEGVIDDP+GEFFIAEDKSLQKESL+QDY+AKYWRQRYSLK
Sbjct: 269 EKMAQCASSAYMSILERWVYEGVIDDPYGEFFIAEDKSLQKESLTQDYEAKYWRQRYSLK 328

Query: 363 DEIPSFLANAAETILTTGKYLNVMRECGHTIQVPLSGNTKLMSSGSSHHYLECIKAAYDF 542
           D IPSFLAN A TILTTGKYLNVMRECGH +QVP S N+KLMS GS+HHYLECIKAAY+F
Sbjct: 329 DGIPSFLANIAGTILTTGKYLNVMRECGHNVQVPPSENSKLMSFGSNHHYLECIKAAYNF 388

Query: 543 SSSELLNLIKEKYDLMGKLRSIKHYLLLDQGDFLVHFMDIARDELFKKPDEISVEKLQSX 722
           +S ELLNLIK+KYDL G+LRSIKHYLLLDQGDFLVHFMDIARDEL KKPDE+SVEKLQS 
Sbjct: 389 ASGELLNLIKDKYDLTGRLRSIKHYLLLDQGDFLVHFMDIARDELAKKPDEVSVEKLQSL 448

Query: 723 XXXXXXXXXXXSDPFHEDLT 782
                      +DPFHE LT
Sbjct: 449 LDLALRTTAAAADPFHEGLT 468


>emb|CBI34898.3| unnamed protein product [Vitis vinifera]
          Length = 702

 Score =  416 bits (1070), Expect = e-114
 Identities = 210/260 (80%), Positives = 229/260 (88%)
 Frame = +3

Query: 3   GRLSIQGLWFYCQPMMGSMQSLSIVVKKASANSIVGSAVLNLLQSQAKAMAGDHIVRSLL 182
           GRLSIQGLWFYCQPMMGSM +LS V+ KASAN+ +GSAVLNLLQSQAKAMAGD+ VRSLL
Sbjct: 164 GRLSIQGLWFYCQPMMGSMLALSTVIHKASANNFMGSAVLNLLQSQAKAMAGDNAVRSLL 223

Query: 183 EKMIQSASSAYLVILERWVYEGVIDDPHGEFFIAEDKSLQKESLSQDYDAKYWRQRYSLK 362
           EKM Q ASSAYL ILERWVYEGVIDDP+GEFFIAE+KSLQKESL+QDYDAKYW QRYSLK
Sbjct: 224 EKMTQCASSAYLGILERWVYEGVIDDPYGEFFIAENKSLQKESLTQDYDAKYWGQRYSLK 283

Query: 363 DEIPSFLANAAETILTTGKYLNVMRECGHTIQVPLSGNTKLMSSGSSHHYLECIKAAYDF 542
           D IPSFLANAA TILTTGKYLNVMRECGH +QVP S ++K +S GS+HHYLECIKAAY+F
Sbjct: 284 DGIPSFLANAAGTILTTGKYLNVMRECGHNVQVPASEDSKFISFGSNHHYLECIKAAYEF 343

Query: 543 SSSELLNLIKEKYDLMGKLRSIKHYLLLDQGDFLVHFMDIARDELFKKPDEISVEKLQSX 722
           SS+ELLNLIKEKYDL+GKLRSIKHYLLLDQGDFLVHFMDIARDEL K+ D+ISVEKLQS 
Sbjct: 344 SSTELLNLIKEKYDLLGKLRSIKHYLLLDQGDFLVHFMDIARDELAKRLDDISVEKLQSL 403

Query: 723 XXXXXXXXXXXSDPFHEDLT 782
                      +DP HEDLT
Sbjct: 404 LDLALRTTAAAADPCHEDLT 423


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