BLASTX nr result

ID: Bupleurum21_contig00006912 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00006912
         (713 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284104.1| PREDICTED: lamin-like protein [Vitis vinifera]    223   3e-56
ref|XP_002324082.1| predicted protein [Populus trichocarpa] gi|1...   221   1e-55
emb|CBI22267.3| unnamed protein product [Vitis vinifera]              220   2e-55
gb|ADV57639.1| copper binding protein 4 [Gossypium hirsutum]          217   2e-54
gb|AFK48969.1| unknown [Lotus japonicus]                              211   9e-53

>ref|XP_002284104.1| PREDICTED: lamin-like protein [Vitis vinifera]
          Length = 171

 Score =  223 bits (568), Expect = 3e-56
 Identities = 101/162 (62%), Positives = 127/162 (78%)
 Frame = +3

Query: 153 VAVLTCIVLVLMLPEVWSKRYIVGGNMGWTSNVNYTNWARNITFHTDDWLFFVYDRNQMD 332
           +AV+    +VLMLP+V + R+ VGGN GW++NVNYT WA++  F+  DWLFFVYDRNQM+
Sbjct: 8   LAVVLMCAVVLMLPDVSATRWTVGGNQGWSTNVNYTVWAKDKHFYNGDWLFFVYDRNQMN 67

Query: 333 VLEVNKTNYETCNAEHPMHNYTTGAGRDVVALNVTRHYYFISSKGFCYSGMKLAVHVVKT 512
           VLEVN+TNYE+CN++HP+HN+TTGAGRDVV LNVTR YYF+S KGFCYSGMK+A++V   
Sbjct: 68  VLEVNETNYESCNSDHPLHNWTTGAGRDVVPLNVTRKYYFLSGKGFCYSGMKIAINVENP 127

Query: 513 PPPTSTLPEKSDSSSSMFNLRSQIVFPTIIAIAAVWDSLIRV 638
           PPP S  P K  + S   N R QIV P + AIAAVWDS +R+
Sbjct: 128 PPPPSASPIKESNDSPSSNYRGQIVVPAVFAIAAVWDSFLRL 169


>ref|XP_002324082.1| predicted protein [Populus trichocarpa] gi|118482789|gb|ABK93312.1|
           unknown [Populus trichocarpa]
           gi|222867084|gb|EEF04215.1| predicted protein [Populus
           trichocarpa]
          Length = 176

 Score =  221 bits (562), Expect = 1e-55
 Identities = 107/168 (63%), Positives = 130/168 (77%), Gaps = 3/168 (1%)
 Frame = +3

Query: 141 SPATVAVLTCI-VLVLMLPEVWSKRYIVGGNMGWTSNVNYTNWARNITFHTDDWLFFVYD 317
           SP  VA+   +  +V+M+PEV + R+ VG NMGWTSNVNYT WA+   F+  DWLFFVYD
Sbjct: 9   SPMMVALAVLVFAMVVMVPEVSATRWTVGSNMGWTSNVNYTIWAQGKHFYNGDWLFFVYD 68

Query: 318 RNQMDVLEVNKTNYETCNAEHPMHNYTTGAGRDVVALNVTRHYYFISSKGFCYSGMKLAV 497
           RNQM++LEVNKT+YE+CN++HP+HN+T GAGRDVV LNVTR+YYFIS KGFCY GMKLAV
Sbjct: 69  RNQMNILEVNKTDYESCNSDHPLHNWTRGAGRDVVPLNVTRNYYFISGKGFCYGGMKLAV 128

Query: 498 HVVKTPPP--TSTLPEKSDSSSSMFNLRSQIVFPTIIAIAAVWDSLIR 635
           HV   PPP   S L EKS S SS+F  RSQ V PT+ AI A+WD+ +R
Sbjct: 129 HVENPPPPPTASPLDEKSGSPSSIF--RSQYVLPTVFAIGALWDAFVR 174


>emb|CBI22267.3| unnamed protein product [Vitis vinifera]
          Length = 159

 Score =  220 bits (561), Expect = 2e-55
 Identities = 99/154 (64%), Positives = 123/154 (79%)
 Frame = +3

Query: 177 LVLMLPEVWSKRYIVGGNMGWTSNVNYTNWARNITFHTDDWLFFVYDRNQMDVLEVNKTN 356
           +VLMLP+V + R+ VGGN GW++NVNYT WA++  F+  DWLFFVYDRNQM+VLEVN+TN
Sbjct: 4   VVLMLPDVSATRWTVGGNQGWSTNVNYTVWAKDKHFYNGDWLFFVYDRNQMNVLEVNETN 63

Query: 357 YETCNAEHPMHNYTTGAGRDVVALNVTRHYYFISSKGFCYSGMKLAVHVVKTPPPTSTLP 536
           YE+CN++HP+HN+TTGAGRDVV LNVTR YYF+S KGFCYSGMK+A++V   PPP S  P
Sbjct: 64  YESCNSDHPLHNWTTGAGRDVVPLNVTRKYYFLSGKGFCYSGMKIAINVENPPPPPSASP 123

Query: 537 EKSDSSSSMFNLRSQIVFPTIIAIAAVWDSLIRV 638
            K  + S   N R QIV P + AIAAVWDS +R+
Sbjct: 124 IKESNDSPSSNYRGQIVVPAVFAIAAVWDSFLRL 157


>gb|ADV57639.1| copper binding protein 4 [Gossypium hirsutum]
          Length = 175

 Score =  217 bits (552), Expect = 2e-54
 Identities = 103/159 (64%), Positives = 122/159 (76%), Gaps = 3/159 (1%)
 Frame = +3

Query: 171 IVLVLMLPEVWSKRYIVGGN-MGWTSNVNYTNWARNITFHTDDWLFFVYDRNQMDVLEVN 347
           + LVLM+P+  + RYIVGG  +GWT+NVNYT WAR   F+  DWL+FVYDRNQM+VLEVN
Sbjct: 16  LALVLMVPQADATRYIVGGGGIGWTTNVNYTVWARGKHFYNGDWLYFVYDRNQMNVLEVN 75

Query: 348 KTNYETCNAEHPMHNYTTGAGRDVVALNVTRHYYFISSKGFCYSGMKLAVHVVKTPPPTS 527
           KT+YE+CNA+HP+HN+TTGAGRDVV LNVTRHYYFIS KGFCY GMKLAV V   PPP  
Sbjct: 76  KTDYESCNADHPLHNWTTGAGRDVVPLNVTRHYYFISGKGFCYGGMKLAVRVENPPPPPK 135

Query: 528 TLP--EKSDSSSSMFNLRSQIVFPTIIAIAAVWDSLIRV 638
             P  EKS SS S    R Q+V P   AIAA+WD+ +R+
Sbjct: 136 AAPLNEKSGSSPSSIVYRGQLVLPAAFAIAALWDTFVRI 174


>gb|AFK48969.1| unknown [Lotus japonicus]
          Length = 176

 Score =  211 bits (538), Expect = 9e-53
 Identities = 100/171 (58%), Positives = 126/171 (73%)
 Frame = +3

Query: 120 MKRLVIVSPATVAVLTCIVLVLMLPEVWSKRYIVGGNMGWTSNVNYTNWARNITFHTDDW 299
           +K+ ++ SPA V +     ++LM+PEV +KR++VG    W  NVNYT WAR+  F+ DDW
Sbjct: 4   VKKKMLGSPAMVLLFLGFAVLLMVPEVSAKRWLVGDGKFWNPNVNYTVWARDKHFYIDDW 63

Query: 300 LFFVYDRNQMDVLEVNKTNYETCNAEHPMHNYTTGAGRDVVALNVTRHYYFISSKGFCYS 479
           LFFVYDRNQM+VLEVNKTNYE C AEHP+HN+TTGAGRDVV LNVTRHYYFIS  GFCY 
Sbjct: 64  LFFVYDRNQMNVLEVNKTNYENCIAEHPIHNWTTGAGRDVVPLNVTRHYYFISGNGFCYG 123

Query: 480 GMKLAVHVVKTPPPTSTLPEKSDSSSSMFNLRSQIVFPTIIAIAAVWDSLI 632
           GMKLAV V K PPP    PEK+  + S+ +  + ++ P ++AI A WD+ I
Sbjct: 124 GMKLAVRVEKLPPPPKAAPEKA-GAPSLSSRGAILLMPVVLAIGAAWDAFI 173


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