BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00006903
         (425 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278878.1| PREDICTED: BUD13 homolog [Vitis vinifera] gi...    72   4e-11
ref|NP_174470.1| pre-mRNA-splicing factor CWC26 [Arabidopsis tha...    64   1e-08
ref|XP_002890953.1| predicted protein [Arabidopsis lyrata subsp....    64   1e-08
ref|XP_002974145.1| hypothetical protein SELMODRAFT_442338 [Sela...    59   4e-07
ref|XP_002532943.1| conserved hypothetical protein [Ricinus comm...    59   4e-07

>ref|XP_002278878.1| PREDICTED: BUD13 homolog [Vitis vinifera]
           gi|297742135|emb|CBI33922.3| unnamed protein product
           [Vitis vinifera]
          Length = 480

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 40/78 (51%), Positives = 51/78 (65%), Gaps = 4/78 (5%)
 Frame = -1

Query: 224 EDLSPVRKSRAGDTQSQVSDLSPPRKSKR----DLSPPRKQLKESTSSADQLKTGLVSGK 57
           +DLSP RK R G   S   D+SPPR+S +    DLSPPRK  K+ +SS +  KTGL+SGK
Sbjct: 216 QDLSPPRKRRKGLGLSGSPDISPPRRSTQTDTPDLSPPRKSRKDVSSSKEPSKTGLISGK 275

Query: 56  DVAEEVLKAKIEEFLRFK 3
           D+ E   K K  ++LRFK
Sbjct: 276 DIGELNAKTKKNDWLRFK 293


>ref|NP_174470.1| pre-mRNA-splicing factor CWC26 [Arabidopsis thaliana]
           gi|79319041|ref|NP_001031124.1| pre-mRNA-splicing factor
           CWC26 [Arabidopsis thaliana]
           gi|12321301|gb|AAG50722.1|AC079041_15 unknown protein
           [Arabidopsis thaliana] gi|44917425|gb|AAS49037.1|
           At1g31870 [Arabidopsis thaliana]
           gi|222422945|dbj|BAH19458.1| AT1G31870 [Arabidopsis
           thaliana] gi|222424111|dbj|BAH20015.1| AT1G31870
           [Arabidopsis thaliana] gi|332193288|gb|AEE31409.1|
           pre-mRNA-splicing factor CWC26 [Arabidopsis thaliana]
           gi|332193289|gb|AEE31410.1| pre-mRNA-splicing factor
           CWC26 [Arabidopsis thaliana]
          Length = 561

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 49/125 (39%), Positives = 63/125 (50%), Gaps = 15/125 (12%)
 Frame = -1

Query: 332 DLSPPRRR---SQVPDPALXXXXXXXXXXXXXXXXXSLG------EDLSPVRKS----RA 192
           DLSPPRRR   S  P+PA                  ++        DLSP RK+    R+
Sbjct: 255 DLSPPRRRRYHSPSPEPARRSSKSFGSNADLSPPGRNINMKDSQDSDLSPQRKAADLRRS 314

Query: 191 GDTQSQVS--DLSPPRKSKRDLSPPRKQLKESTSSADQLKTGLVSGKDVAEEVLKAKIEE 18
            +  S+ S  D SPPR+ +RD SPP+        S +Q KTGL+SGKD+  E  K K +E
Sbjct: 315 SENVSRSSNFDSSPPRRPRRDSSPPQ-------ISKEQRKTGLISGKDIGSEYRKKKEDE 367

Query: 17  FLRFK 3
            LRFK
Sbjct: 368 KLRFK 372


>ref|XP_002890953.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297336795|gb|EFH67212.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 560

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 48/122 (39%), Positives = 57/122 (46%), Gaps = 12/122 (9%)
 Frame = -1

Query: 332 DLSPPRRR---SQVPDPALXXXXXXXXXXXXXXXXXSLGEDLSPVRK------SRAGDTQ 180
           DLSPPRRR   S  P+P                       DLSP R+      SR  D  
Sbjct: 261 DLSPPRRRRYHSPSPEPGRRPSKFIAS-----------NADLSPPRRNMNMKGSRDSDLS 309

Query: 179 SQVSDLSPPRKSKRDLSPPRKQLKEST---SSADQLKTGLVSGKDVAEEVLKAKIEEFLR 9
            Q     P R S  D SPPR+  +ES    +S +Q KTGL+SGKD+  E  K K +E LR
Sbjct: 310 PQRKTADPRRSSNIDSSPPRRPRRESPPPQTSKEQRKTGLISGKDIGSEYRKKKEDEQLR 369

Query: 8   FK 3
           FK
Sbjct: 370 FK 371


>ref|XP_002974145.1| hypothetical protein SELMODRAFT_442338 [Selaginella moellendorffii]
           gi|300158477|gb|EFJ25100.1| hypothetical protein
           SELMODRAFT_442338 [Selaginella moellendorffii]
          Length = 700

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 42/115 (36%), Positives = 57/115 (49%), Gaps = 5/115 (4%)
 Frame = -1

Query: 332 DLSPPRRRSQVPDPALXXXXXXXXXXXXXXXXXSLGEDLSPVRKSRAGDT----QSQVSD 165
           DLSPPRRR +     L                   G DLSP RK   GD     +S+  D
Sbjct: 392 DLSPPRRRQRTDTEDLSPPRRKS------------GRDLSPRRKGGGGDLSPPRRSRGED 439

Query: 164 LSPPRK-SKRDLSPPRKQLKESTSSADQLKTGLVSGKDVAEEVLKAKIEEFLRFK 3
           LSPPR+ S  DLSPPR+   +  S  D+ K GL +G ++  E+ + + ++  RFK
Sbjct: 440 LSPPRRRSTSDLSPPRRGRVDDAS--DKAKAGLKTGSELRHEITEKQSQDARRFK 492


>ref|XP_002532943.1| conserved hypothetical protein [Ricinus communis]
           gi|223527294|gb|EEF29447.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 570

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 38/94 (40%), Positives = 51/94 (54%), Gaps = 18/94 (19%)
 Frame = -1

Query: 230 LGEDLSPVRKSRAGDTQSQVSDLSPPRKSKR---------------DLSPPRKQLKEST- 99
           LG DLSP RK+RA   +S   DLSPPR  +R               D S  RK  K+S+ 
Sbjct: 290 LGSDLSPPRKNRANIEKSGSPDLSPPRLPRRSSSTADGSSRAYSDKDASVTRKTQKDSSD 349

Query: 98  --SSADQLKTGLVSGKDVAEEVLKAKIEEFLRFK 3
             S  ++ KTGL++G D+ EE+ K K  + LRF+
Sbjct: 350 PISLKERPKTGLITGHDIQEEISKTKKNDLLRFE 383