BLASTX nr result

ID: Bupleurum21_contig00006896 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00006896
         (754 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314972.1| predicted protein [Populus trichocarpa] gi|2...   198   9e-49
ref|XP_003546300.1| PREDICTED: E3 ubiquitin-protein ligase UPL6-...   196   3e-48
ref|XP_003594658.1| E3 ubiquitin-protein ligase UPL6 [Medicago t...   196   3e-48
ref|XP_003631937.1| PREDICTED: E3 ubiquitin-protein ligase UPL6-...   194   1e-47
ref|XP_003631936.1| PREDICTED: E3 ubiquitin-protein ligase UPL6-...   194   1e-47

>ref|XP_002314972.1| predicted protein [Populus trichocarpa] gi|222864012|gb|EEF01143.1|
            predicted protein [Populus trichocarpa]
          Length = 1027

 Score =  198 bits (504), Expect = 9e-49
 Identities = 97/131 (74%), Positives = 111/131 (84%)
 Frame = +3

Query: 3    ELQLMISGSPDGFDLDDLRSYTNYSGGYHSDHDVIDMFWEVLKSFSTENKRKFLKFVTGC 182
            ELQL+ISGS D  D+DDLRS+TNY+GGYHS+H VI+MFWEV+K FS EN++KFLKFVTGC
Sbjct: 898  ELQLLISGSLDSLDIDDLRSHTNYAGGYHSEHYVIEMFWEVMKGFSLENQKKFLKFVTGC 957

Query: 183  SRGPLLGFGYLTPPFCIHGTTGGEASQEALDRLSTSATCANILKLPPYKSKELMEQKLLY 362
            SRGPLLGF YL P FCI    GG AS+EALDRL TSATC N+LKLPPY+SKE +  KLLY
Sbjct: 958  SRGPLLGFKYLEPLFCIQ-RAGGTASEEALDRLPTSATCMNLLKLPPYRSKEQLATKLLY 1016

Query: 363  SINANAGFFLS 395
            SINA+AGF LS
Sbjct: 1017 SINADAGFDLS 1027


>ref|XP_003546300.1| PREDICTED: E3 ubiquitin-protein ligase UPL6-like [Glycine max]
          Length = 1031

 Score =  196 bits (499), Expect = 3e-48
 Identities = 97/131 (74%), Positives = 107/131 (81%)
 Frame = +3

Query: 3    ELQLMISGSPDGFDLDDLRSYTNYSGGYHSDHDVIDMFWEVLKSFSTENKRKFLKFVTGC 182
            ELQL+ISGS D  D+DDLR +TNY+GGYHSDH VI+MFWEVLK FS ENK+KFLKFVTGC
Sbjct: 902  ELQLLISGSLDSLDVDDLRQHTNYAGGYHSDHHVIEMFWEVLKGFSLENKKKFLKFVTGC 961

Query: 183  SRGPLLGFGYLTPPFCIHGTTGGEASQEALDRLSTSATCANILKLPPYKSKELMEQKLLY 362
            SRGPLLGF YL P FCI    G     EALDRL TSATC N+LKLPPYKSKE +E KLLY
Sbjct: 962  SRGPLLGFQYLEPLFCIQ-RAGSNDPDEALDRLPTSATCMNLLKLPPYKSKEQLETKLLY 1020

Query: 363  SINANAGFFLS 395
            +INA+AGF LS
Sbjct: 1021 AINADAGFDLS 1031


>ref|XP_003594658.1| E3 ubiquitin-protein ligase UPL6 [Medicago truncatula]
            gi|355483706|gb|AES64909.1| E3 ubiquitin-protein ligase
            UPL6 [Medicago truncatula]
          Length = 1103

 Score =  196 bits (499), Expect = 3e-48
 Identities = 94/131 (71%), Positives = 111/131 (84%)
 Frame = +3

Query: 3    ELQLMISGSPDGFDLDDLRSYTNYSGGYHSDHDVIDMFWEVLKSFSTENKRKFLKFVTGC 182
            ELQL+ISGS D  D+DDLR +TNY+G YHS+HDVI+MFWEVLK FS ENK+KFLKFVTGC
Sbjct: 974  ELQLLISGSLDSLDVDDLREHTNYAGTYHSEHDVIEMFWEVLKGFSMENKKKFLKFVTGC 1033

Query: 183  SRGPLLGFGYLTPPFCIHGTTGGEASQEALDRLSTSATCANILKLPPYKSKELMEQKLLY 362
            SRGPLLGF YL P FCI    GG A+++ALDRL T+ATC N+LKLPPY+SK+ ME KLLY
Sbjct: 1034 SRGPLLGFRYLEPLFCIQ-RAGGNATEDALDRLPTAATCMNLLKLPPYRSKDQMESKLLY 1092

Query: 363  SINANAGFFLS 395
            +IN++AGF LS
Sbjct: 1093 AINSDAGFDLS 1103


>ref|XP_003631937.1| PREDICTED: E3 ubiquitin-protein ligase UPL6-like isoform 2 [Vitis
            vinifera]
          Length = 1016

 Score =  194 bits (494), Expect = 1e-47
 Identities = 97/131 (74%), Positives = 109/131 (83%)
 Frame = +3

Query: 3    ELQLMISGSPDGFDLDDLRSYTNYSGGYHSDHDVIDMFWEVLKSFSTENKRKFLKFVTGC 182
            ELQL+ISGS DG D+DDLRS TNY+GGYHS+H VI+ FWEVLKSF+ EN+ KFLKFVTGC
Sbjct: 887  ELQLLISGSLDGLDVDDLRSNTNYAGGYHSEHYVIETFWEVLKSFTLENQMKFLKFVTGC 946

Query: 183  SRGPLLGFGYLTPPFCIHGTTGGEASQEALDRLSTSATCANILKLPPYKSKELMEQKLLY 362
            SRGPLLGF YL P FCI     G AS+EALDRL TSATC N+LKLPPY+SKE M  KLLY
Sbjct: 947  SRGPLLGFKYLEPLFCIQ-RAAGSASEEALDRLPTSATCMNLLKLPPYRSKEQMATKLLY 1005

Query: 363  SINANAGFFLS 395
            +INA+AGF LS
Sbjct: 1006 AINADAGFDLS 1016


>ref|XP_003631936.1| PREDICTED: E3 ubiquitin-protein ligase UPL6-like isoform 1 [Vitis
            vinifera] gi|296083205|emb|CBI22841.3| unnamed protein
            product [Vitis vinifera]
          Length = 1034

 Score =  194 bits (494), Expect = 1e-47
 Identities = 97/131 (74%), Positives = 109/131 (83%)
 Frame = +3

Query: 3    ELQLMISGSPDGFDLDDLRSYTNYSGGYHSDHDVIDMFWEVLKSFSTENKRKFLKFVTGC 182
            ELQL+ISGS DG D+DDLRS TNY+GGYHS+H VI+ FWEVLKSF+ EN+ KFLKFVTGC
Sbjct: 905  ELQLLISGSLDGLDVDDLRSNTNYAGGYHSEHYVIETFWEVLKSFTLENQMKFLKFVTGC 964

Query: 183  SRGPLLGFGYLTPPFCIHGTTGGEASQEALDRLSTSATCANILKLPPYKSKELMEQKLLY 362
            SRGPLLGF YL P FCI     G AS+EALDRL TSATC N+LKLPPY+SKE M  KLLY
Sbjct: 965  SRGPLLGFKYLEPLFCIQ-RAAGSASEEALDRLPTSATCMNLLKLPPYRSKEQMATKLLY 1023

Query: 363  SINANAGFFLS 395
            +INA+AGF LS
Sbjct: 1024 AINADAGFDLS 1034


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