BLASTX nr result

ID: Bupleurum21_contig00006876 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00006876
         (398 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003598202.1| 60S ribosomal protein L23 [Medicago truncatu...    80   2e-13
ref|XP_002515720.1| conserved hypothetical protein [Ricinus comm...    77   1e-12
ref|XP_003620730.1| hypothetical protein MTR_6g089560 [Medicago ...    72   5e-11
ref|XP_003607468.1| hypothetical protein MTR_4g078340 [Medicago ...    68   7e-10
ref|NP_001235218.1| uncharacterized protein LOC100527633 [Glycin...    68   7e-10

>ref|XP_003598202.1| 60S ribosomal protein L23 [Medicago truncatula]
           gi|355487250|gb|AES68453.1| 60S ribosomal protein L23
           [Medicago truncatula]
          Length = 547

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 43/118 (36%), Positives = 63/118 (53%), Gaps = 2/118 (1%)
 Frame = +3

Query: 48  KASLNSMATRSDM--QLPLTWQPPPIGCYKLNVDASVFKGESSFSIGMVLRDDHGHFVKG 221
           +A+ NS  T+     Q  + WQPP  G  K NVDA++F  ++ F  GM +RD  G F+K 
Sbjct: 37  QAARNSATTQVQQSPQDTIAWQPPAAGFLKCNVDAAIFSEQNRFGTGMCVRDQRGRFLKA 96

Query: 222 KNMRFSGEVTVMEAEARGVQEAISWIEDLNLQGVSIECDSELVVKAVHSHLEYYLEVG 395
               + G     EAEA G+++AI W+  L L  V +E D +LVV +++       E G
Sbjct: 97  ATNWYEGCPPPQEAEAVGLRDAILWLGQLELSNVQLELDCKLVVDSIYDKNNNQAEFG 154


>ref|XP_002515720.1| conserved hypothetical protein [Ricinus communis]
           gi|223545157|gb|EEF46667.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 156

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 43/123 (34%), Positives = 67/123 (54%)
 Frame = +3

Query: 27  WEEAKERKASLNSMATRSDMQLPLTWQPPPIGCYKLNVDASVFKGESSFSIGMVLRDDHG 206
           W +A+  K SL S+ +  +       Q P  G  K ++DA+ F+      IG++  D+ G
Sbjct: 13  WAKARMSKLSLKSLGSAEEGNQYR--QKPARGWVKCDMDAATFENGRVIGIGLMSMDEEG 70

Query: 207 HFVKGKNMRFSGEVTVMEAEARGVQEAISWIEDLNLQGVSIECDSELVVKAVHSHLEYYL 386
            FVKGK+   +G + + EAEA G++EA+SW  +  LQ V  E D+++V+ A H   E   
Sbjct: 71  RFVKGKSFCMNGRIAIKEAEAMGLKEALSWCLEQGLQRVIFESDAKVVMGAFHYRPEELS 130

Query: 387 EVG 395
           E G
Sbjct: 131 EFG 133


>ref|XP_003620730.1| hypothetical protein MTR_6g089560 [Medicago truncatula]
           gi|355495745|gb|AES76948.1| hypothetical protein
           MTR_6g089560 [Medicago truncatula]
          Length = 205

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 41/126 (32%), Positives = 66/126 (52%), Gaps = 6/126 (4%)
 Frame = +3

Query: 39  KERKASLNSM------ATRSDMQLPLTWQPPPIGCYKLNVDASVFKGESSFSIGMVLRDD 200
           +++ A++NS       +T +++Q  + WQPP  G  K NVDA+     +   +G+ LRDD
Sbjct: 42  QQQAAAVNSSVAVLAASTTAELQ-QIKWQPPASGRLKCNVDATFSIPHNRIGVGICLRDD 100

Query: 201 HGHFVKGKNMRFSGEVTVMEAEARGVQEAISWIEDLNLQGVSIECDSELVVKAVHSHLEY 380
            G FV  K + F G  +V   EA G+  AI W+ D+ +  +  E DS++   A  +  + 
Sbjct: 101 EGTFVLAKIVNFEGVYSVEVGEALGLFHAIQWLSDMQMDNIDFEVDSKIRKDAFTARRDD 160

Query: 381 YLEVGH 398
             E GH
Sbjct: 161 ISEFGH 166


>ref|XP_003607468.1| hypothetical protein MTR_4g078340 [Medicago truncatula]
           gi|355508523|gb|AES89665.1| hypothetical protein
           MTR_4g078340 [Medicago truncatula]
          Length = 181

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 38/116 (32%), Positives = 55/116 (47%)
 Frame = +3

Query: 48  KASLNSMATRSDMQLPLTWQPPPIGCYKLNVDASVFKGESSFSIGMVLRDDHGHFVKGKN 227
           K++       +  Q  +TWQP   G YK N+DA+     +   IG+ +RD  G FV  K 
Sbjct: 4   KSNHQPTTASTSQQHRITWQPHVAGRYKCNIDAAFTSHVNCTCIGICVRDAEGTFVLAKT 63

Query: 228 MRFSGEVTVMEAEARGVQEAISWIEDLNLQGVSIECDSELVVKAVHSHLEYYLEVG 395
           M +   V+V   EA G+  A+ W+ D+    V  E DS+L   A  S +    E G
Sbjct: 64  MTYPCTVSVDVGEALGMHSALQWLSDMQFDNVDFETDSKLTADAFLSTMNDLSEFG 119


>ref|NP_001235218.1| uncharacterized protein LOC100527633 [Glycine max]
           gi|255632818|gb|ACU16762.1| unknown [Glycine max]
          Length = 165

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 36/95 (37%), Positives = 57/95 (60%)
 Frame = +3

Query: 24  EWEEAKERKASLNSMATRSDMQLPLTWQPPPIGCYKLNVDASVFKGESSFSIGMVLRDDH 203
           EW+  ++R  S+N+ + +S  Q    W PP  G  KLNVDA++F   S F  GM +RD++
Sbjct: 60  EWKHERKRN-SVNTPSPQS--QAHAIWIPPTSGSLKLNVDAAIFLSISCFGAGMCIRDEN 116

Query: 204 GHFVKGKNMRFSGEVTVMEAEARGVQEAISWIEDL 308
           G F++ +     GE + +EAEA  + + I+WI +L
Sbjct: 117 GRFLQARTQWNYGEPSPLEAEAWALLQGINWIHEL 151


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