BLASTX nr result

ID: Bupleurum21_contig00006871 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00006871
         (1864 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530291.1| ubiquitin-protein ligase, putative [Ricinus ...   609   e-172
ref|XP_002282284.2| PREDICTED: F-box/kelch-repeat protein At5g60...   600   e-169
emb|CBI16301.3| unnamed protein product [Vitis vinifera]              599   e-169
ref|XP_003540741.1| PREDICTED: F-box/kelch-repeat protein At5g60...   571   e-160
ref|XP_003543480.1| PREDICTED: F-box/kelch-repeat protein At5g60...   570   e-160

>ref|XP_002530291.1| ubiquitin-protein ligase, putative [Ricinus communis]
            gi|223530189|gb|EEF32098.1| ubiquitin-protein ligase,
            putative [Ricinus communis]
          Length = 376

 Score =  609 bits (1571), Expect = e-172
 Identities = 290/377 (76%), Positives = 324/377 (85%), Gaps = 2/377 (0%)
 Frame = +2

Query: 452  EGDGE--GRGIVDMRPNGGNHDGCFKFGSNDSLIPGLYDDVALNCIAWASRSDYRSLSCL 625
            EG+ E   R I++ R  GG +DG  + GS+DSL+PGL DDVALNC+AWA RSDY SL+C+
Sbjct: 2    EGEEEVMSRSIINTR--GGVNDGRLRLGSSDSLLPGLIDDVALNCLAWACRSDYASLACI 59

Query: 626  NTRFNKLMKSGYLYELRKKLEIVEHSVYMVCDPRGWEAFDPIKNKWLKLPKIPCDECFNH 805
            N RF+KL++SGYLY LRK+L I EH VY+VCDPRGWEAFDP++ KW+ LPKIPCDECFNH
Sbjct: 60   NKRFHKLIESGYLYGLRKQLGITEHWVYLVCDPRGWEAFDPVRKKWMALPKIPCDECFNH 119

Query: 806  ADKESLAVGNELLVFGRELFGFAVWKYSLIHHNWFKCEGINHPRCLFGSGSRGPLAIVAG 985
            ADKESLAVG+ELLVFGRELF FA+WKYSLI   W KCEG+N PRCLFGSGS G +A+VAG
Sbjct: 120  ADKESLAVGSELLVFGRELFDFAIWKYSLIRRGWVKCEGMNRPRCLFGSGSLGSIAVVAG 179

Query: 986  GSDKSGNILKSAELYDSSTGRWEMLPDMHLPRKLSTGFFMDEKFYVIGGMTSHTDSLTCG 1165
            GSDK+GN+L SAELYDSSTG+WEMLP+MH PR+L +GFFMD KFYVIGGM+S T SLTCG
Sbjct: 180  GSDKNGNVLNSAELYDSSTGKWEMLPNMHSPRRLCSGFFMDGKFYVIGGMSSPTVSLTCG 239

Query: 1166 EELDLNTNKWRRIEGMYPNVNKAAQAPPLVAVVDNQLYAVEYLTNDVIKYDKEKNKWDVL 1345
            EE D  T KWR IEGMYPNVN+AAQAPPLVAVVDNQLYAVEYLTN V KYDK KN W+VL
Sbjct: 240  EEYDFETRKWRMIEGMYPNVNRAAQAPPLVAVVDNQLYAVEYLTNMVKKYDKVKNTWEVL 299

Query: 1346 GRLPVRADYSNGWGLAFKAYGNQLLVVGGQRSQEGEAIVLNSWFPKSGVKNGTLDWKVLG 1525
            GRLPVRAD SNGWGLAFKA G +LLVVGGQR  EGEA+VLNSW PKSGV NGTLDWKVLG
Sbjct: 300  GRLPVRADSSNGWGLAFKACGEKLLVVGGQRGPEGEAVVLNSWCPKSGVNNGTLDWKVLG 359

Query: 1526 VKEKVGVFVYNCAVMGC 1576
            VKE VGVFVYNCAVMGC
Sbjct: 360  VKEHVGVFVYNCAVMGC 376


>ref|XP_002282284.2| PREDICTED: F-box/kelch-repeat protein At5g60570-like [Vitis vinifera]
          Length = 416

 Score =  600 bits (1546), Expect = e-169
 Identities = 286/365 (78%), Positives = 315/365 (86%)
 Frame = +2

Query: 482  DMRPNGGNHDGCFKFGSNDSLIPGLYDDVALNCIAWASRSDYRSLSCLNTRFNKLMKSGY 661
            +MR     +DGC +  +N SL+PGL DDVAL C+A A RSDY SLSCLNTRFNKL+KSG 
Sbjct: 52   NMRSKRRVYDGCGQIETNGSLLPGLCDDVALKCLALACRSDYASLSCLNTRFNKLIKSGN 111

Query: 662  LYELRKKLEIVEHSVYMVCDPRGWEAFDPIKNKWLKLPKIPCDECFNHADKESLAVGNEL 841
            LY  RK L I EH VY+VCD RGWEAFD ++ KW+KLPKIPCDECFNHADKESLAVG+EL
Sbjct: 112  LYGERKVLGIAEHWVYLVCDLRGWEAFDAMRKKWMKLPKIPCDECFNHADKESLAVGSEL 171

Query: 842  LVFGRELFGFAVWKYSLIHHNWFKCEGINHPRCLFGSGSRGPLAIVAGGSDKSGNILKSA 1021
            LVFGRE + FA+WKYSL+  NW KC+G+N PRCLFGS S G +AIVAGGSDKSGN+LKSA
Sbjct: 172  LVFGREFYDFAIWKYSLVRGNWIKCQGMNLPRCLFGSSSLGSIAIVAGGSDKSGNVLKSA 231

Query: 1022 ELYDSSTGRWEMLPDMHLPRKLSTGFFMDEKFYVIGGMTSHTDSLTCGEELDLNTNKWRR 1201
            ELYDSS+GRWEMLP+MH PR+L +GFFMD KFYVIGGMTS TDSLTCGEE DL T +WR+
Sbjct: 232  ELYDSSSGRWEMLPNMHSPRRLCSGFFMDGKFYVIGGMTSPTDSLTCGEEFDLKTREWRK 291

Query: 1202 IEGMYPNVNKAAQAPPLVAVVDNQLYAVEYLTNDVIKYDKEKNKWDVLGRLPVRADYSNG 1381
            IEGMYPNVN+AAQAPPLVAVVDNQLYAVEYLTN V KYDKEKN WDVLGRLPVRAD SNG
Sbjct: 292  IEGMYPNVNRAAQAPPLVAVVDNQLYAVEYLTNMVKKYDKEKNTWDVLGRLPVRADLSNG 351

Query: 1382 WGLAFKAYGNQLLVVGGQRSQEGEAIVLNSWFPKSGVKNGTLDWKVLGVKEKVGVFVYNC 1561
            WGLAFKA G QLLVVGGQR  EGEA+VLNSW PKSGVK+GTLDWKV+GVKE VGVFVYNC
Sbjct: 352  WGLAFKACGEQLLVVGGQRGPEGEAVVLNSWHPKSGVKDGTLDWKVIGVKEHVGVFVYNC 411

Query: 1562 AVMGC 1576
            AVMGC
Sbjct: 412  AVMGC 416


>emb|CBI16301.3| unnamed protein product [Vitis vinifera]
          Length = 364

 Score =  599 bits (1545), Expect = e-169
 Identities = 286/364 (78%), Positives = 314/364 (86%)
 Frame = +2

Query: 485  MRPNGGNHDGCFKFGSNDSLIPGLYDDVALNCIAWASRSDYRSLSCLNTRFNKLMKSGYL 664
            MR     +DGC +  +N SL+PGL DDVAL C+A A RSDY SLSCLNTRFNKL+KSG L
Sbjct: 1    MRSKRRVYDGCGQIETNGSLLPGLCDDVALKCLALACRSDYASLSCLNTRFNKLIKSGNL 60

Query: 665  YELRKKLEIVEHSVYMVCDPRGWEAFDPIKNKWLKLPKIPCDECFNHADKESLAVGNELL 844
            Y  RK L I EH VY+VCD RGWEAFD ++ KW+KLPKIPCDECFNHADKESLAVG+ELL
Sbjct: 61   YGERKVLGIAEHWVYLVCDLRGWEAFDAMRKKWMKLPKIPCDECFNHADKESLAVGSELL 120

Query: 845  VFGRELFGFAVWKYSLIHHNWFKCEGINHPRCLFGSGSRGPLAIVAGGSDKSGNILKSAE 1024
            VFGRE + FA+WKYSL+  NW KC+G+N PRCLFGS S G +AIVAGGSDKSGN+LKSAE
Sbjct: 121  VFGREFYDFAIWKYSLVRGNWIKCQGMNLPRCLFGSSSLGSIAIVAGGSDKSGNVLKSAE 180

Query: 1025 LYDSSTGRWEMLPDMHLPRKLSTGFFMDEKFYVIGGMTSHTDSLTCGEELDLNTNKWRRI 1204
            LYDSS+GRWEMLP+MH PR+L +GFFMD KFYVIGGMTS TDSLTCGEE DL T +WR+I
Sbjct: 181  LYDSSSGRWEMLPNMHSPRRLCSGFFMDGKFYVIGGMTSPTDSLTCGEEFDLKTREWRKI 240

Query: 1205 EGMYPNVNKAAQAPPLVAVVDNQLYAVEYLTNDVIKYDKEKNKWDVLGRLPVRADYSNGW 1384
            EGMYPNVN+AAQAPPLVAVVDNQLYAVEYLTN V KYDKEKN WDVLGRLPVRAD SNGW
Sbjct: 241  EGMYPNVNRAAQAPPLVAVVDNQLYAVEYLTNMVKKYDKEKNTWDVLGRLPVRADLSNGW 300

Query: 1385 GLAFKAYGNQLLVVGGQRSQEGEAIVLNSWFPKSGVKNGTLDWKVLGVKEKVGVFVYNCA 1564
            GLAFKA G QLLVVGGQR  EGEA+VLNSW PKSGVK+GTLDWKV+GVKE VGVFVYNCA
Sbjct: 301  GLAFKACGEQLLVVGGQRGPEGEAVVLNSWHPKSGVKDGTLDWKVIGVKEHVGVFVYNCA 360

Query: 1565 VMGC 1576
            VMGC
Sbjct: 361  VMGC 364


>ref|XP_003540741.1| PREDICTED: F-box/kelch-repeat protein At5g60570-like [Glycine max]
          Length = 397

 Score =  571 bits (1471), Expect = e-160
 Identities = 272/380 (71%), Positives = 315/380 (82%), Gaps = 2/380 (0%)
 Frame = +2

Query: 440  NLLEEGDGEGRGIVDMRPNGGNHDGCFKFGSNDSLIPGLYDDVALNCIAWASRSDYRSLS 619
            +L E+ +      V++    G +DG  + G NDSL+PGL+DDVALNC+AWASRSDY SL+
Sbjct: 10   SLQEDVEKVNNSFVELDTREGMNDGFPRAGPNDSLLPGLFDDVALNCLAWASRSDYASLA 69

Query: 620  CLNTRFNKLMKSGYLYELRKKLEIVE--HSVYMVCDPRGWEAFDPIKNKWLKLPKIPCDE 793
            C+N R+N L++SGYL ELRKKL IVE  H VY+VCDPRGWE FDP KN+W+ LPKIPCDE
Sbjct: 70   CINKRYNLLIRSGYLSELRKKLGIVELEHLVYLVCDPRGWEVFDPKKNRWITLPKIPCDE 129

Query: 794  CFNHADKESLAVGNELLVFGRELFGFAVWKYSLIHHNWFKCEGINHPRCLFGSGSRGPLA 973
            CFNHADKESLAVG+E+LVFGREL  FA+WKYSLI  NW KC+ +N PRCLFGSG+ G +A
Sbjct: 130  CFNHADKESLAVGSEMLVFGRELMDFAIWKYSLISCNWVKCKEMNRPRCLFGSGNLGSIA 189

Query: 974  IVAGGSDKSGNILKSAELYDSSTGRWEMLPDMHLPRKLSTGFFMDEKFYVIGGMTSHTDS 1153
            IVAGGSDK GN+L+SAELYDS++G WE+LP+MH PR+L +GFFMD KFYVIGGM+S   S
Sbjct: 190  IVAGGSDKYGNVLESAELYDSNSGTWELLPNMHTPRRLCSGFFMDGKFYVIGGMSSPIVS 249

Query: 1154 LTCGEELDLNTNKWRRIEGMYPNVNKAAQAPPLVAVVDNQLYAVEYLTNDVIKYDKEKNK 1333
            LTCGEE DL T  WR+IEGMYP VN AAQAPPLVAVVDNQLYAVE+LTN V KYDKE+N 
Sbjct: 250  LTCGEEYDLKTRNWRKIEGMYPYVNGAAQAPPLVAVVDNQLYAVEHLTNMVNKYDKERNT 309

Query: 1334 WDVLGRLPVRADYSNGWGLAFKAYGNQLLVVGGQRSQEGEAIVLNSWFPKSGVKNGTLDW 1513
            W  LGRLPVRAD SNGWGLAFKA G +LLVV GQR  EGEA+VLNSW P++G +NGT+DW
Sbjct: 310  WSELGRLPVRADSSNGWGLAFKACGEKLLVVSGQRGPEGEAVVLNSWRPRTGFRNGTIDW 369

Query: 1514 KVLGVKEKVGVFVYNCAVMG 1573
            KVLGVKE VGVFVYNCAVMG
Sbjct: 370  KVLGVKEHVGVFVYNCAVMG 389


>ref|XP_003543480.1| PREDICTED: F-box/kelch-repeat protein At5g60570-like [Glycine max]
          Length = 389

 Score =  570 bits (1470), Expect = e-160
 Identities = 275/378 (72%), Positives = 309/378 (81%), Gaps = 3/378 (0%)
 Frame = +2

Query: 452  EGDGEGRGI---VDMRPNGGNHDGCFKFGSNDSLIPGLYDDVALNCIAWASRSDYRSLSC 622
            +G+ +G+ +   ++M    G +DG    G NDSLIPGL DDVALNC+AW S SDY  LSC
Sbjct: 12   QGEEDGKKVNNFLEMDRGEGVNDGFSGPGPNDSLIPGLIDDVALNCLAWVSGSDYAVLSC 71

Query: 623  LNTRFNKLMKSGYLYELRKKLEIVEHSVYMVCDPRGWEAFDPIKNKWLKLPKIPCDECFN 802
            +N RFNKL+ SGYLY LRK+L  VEH VYMVCDPRGW AFDP  N+W+ LPKIPCDECFN
Sbjct: 72   INKRFNKLINSGYLYGLRKQLGAVEHLVYMVCDPRGWVAFDPKINRWISLPKIPCDECFN 131

Query: 803  HADKESLAVGNELLVFGRELFGFAVWKYSLIHHNWFKCEGINHPRCLFGSGSRGPLAIVA 982
            HADKESLAVG ELLVFGREL  FA+WKYS+I   W KC+ +N PRCLFGS S G +AIVA
Sbjct: 132  HADKESLAVGCELLVFGRELMEFAIWKYSMICRGWVKCQEMNQPRCLFGSSSLGSIAIVA 191

Query: 983  GGSDKSGNILKSAELYDSSTGRWEMLPDMHLPRKLSTGFFMDEKFYVIGGMTSHTDSLTC 1162
            GGSDK GN+LKSAELYDSSTG WE+LP+MH PR+L +GFFMD KFYVIGGM+S T SL+C
Sbjct: 192  GGSDKYGNVLKSAELYDSSTGMWELLPNMHAPRRLCSGFFMDGKFYVIGGMSSTTVSLSC 251

Query: 1163 GEELDLNTNKWRRIEGMYPNVNKAAQAPPLVAVVDNQLYAVEYLTNDVIKYDKEKNKWDV 1342
            GEE DL T  WR+IEGMYP VN   QAPPLVAVVDNQLYAVE+LTN V KYDKE+N W+ 
Sbjct: 252  GEEYDLKTRSWRKIEGMYPYVNVGVQAPPLVAVVDNQLYAVEHLTNMVKKYDKERNTWNE 311

Query: 1343 LGRLPVRADYSNGWGLAFKAYGNQLLVVGGQRSQEGEAIVLNSWFPKSGVKNGTLDWKVL 1522
            LGRLPVRAD SNGWGLAFKA G QLLVVGGQR  EGEAIVL+SW PKSG+ NGT+DW+VL
Sbjct: 312  LGRLPVRADSSNGWGLAFKACGEQLLVVGGQRGPEGEAIVLSSWCPKSGISNGTIDWQVL 371

Query: 1523 GVKEKVGVFVYNCAVMGC 1576
            GVKE VGVFVYNCAVMGC
Sbjct: 372  GVKEHVGVFVYNCAVMGC 389


Top