BLASTX nr result

ID: Bupleurum21_contig00006867 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00006867
         (384 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001236494.1| chloride channel [Glycine max] gi|66220164|g...    93   3e-17
ref|XP_003553925.1| PREDICTED: chloride channel protein CLC-b-li...    92   4e-17
gb|AAD29679.1|AF133209_1 CLC-Nt2 protein [Nicotiana tabacum]           91   1e-16
ref|XP_002300101.1| Cl-channel clc-7 [Populus trichocarpa] gi|22...    89   5e-16
ref|XP_002509531.1| chloride channel clc, putative [Ricinus comm...    88   6e-16

>ref|NP_001236494.1| chloride channel [Glycine max] gi|66220164|gb|AAY43007.1| chloride
           channel [Glycine max]
          Length = 783

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 46/67 (68%), Positives = 49/67 (73%)
 Frame = -2

Query: 383 INENDLFKQDWRSRSKVQVLQYVFLKWTFAFLVGLLTGVXXXXXXXXXXXXAGYKLLAVA 204
           INENDLFKQDWRSRS+ QVLQY+F KWT AFLVGLLTGV            AGYK LAV 
Sbjct: 66  INENDLFKQDWRSRSRTQVLQYIFWKWTLAFLVGLLTGVIATLINLAVENIAGYKFLAVV 125

Query: 203 NYIDKER 183
           N+I KER
Sbjct: 126 NFIQKER 132


>ref|XP_003553925.1| PREDICTED: chloride channel protein CLC-b-like [Glycine max]
          Length = 790

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 46/67 (68%), Positives = 49/67 (73%)
 Frame = -2

Query: 383 INENDLFKQDWRSRSKVQVLQYVFLKWTFAFLVGLLTGVXXXXXXXXXXXXAGYKLLAVA 204
           INENDLFK DWRSRS+VQVLQY+FLKW  AFLVGLLTG+            AGYKLLAV 
Sbjct: 67  INENDLFKHDWRSRSRVQVLQYIFLKWLLAFLVGLLTGIIATLINLAVENIAGYKLLAVL 126

Query: 203 NYIDKER 183
            YI KER
Sbjct: 127 KYIHKER 133


>gb|AAD29679.1|AF133209_1 CLC-Nt2 protein [Nicotiana tabacum]
          Length = 786

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 46/67 (68%), Positives = 48/67 (71%)
 Frame = -2

Query: 383 INENDLFKQDWRSRSKVQVLQYVFLKWTFAFLVGLLTGVXXXXXXXXXXXXAGYKLLAVA 204
           INENDLFK DWR RS+VQVLQYVFLKWT AFLVGLLTGV            AGYKL AV 
Sbjct: 65  INENDLFKHDWRRRSRVQVLQYVFLKWTLAFLVGLLTGVTATLINLAIENMAGYKLRAVV 124

Query: 203 NYIDKER 183
           NYI+  R
Sbjct: 125 NYIEDRR 131


>ref|XP_002300101.1| Cl-channel clc-7 [Populus trichocarpa] gi|222847359|gb|EEE84906.1|
           Cl-channel clc-7 [Populus trichocarpa]
          Length = 785

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 43/67 (64%), Positives = 50/67 (74%)
 Frame = -2

Query: 383 INENDLFKQDWRSRSKVQVLQYVFLKWTFAFLVGLLTGVXXXXXXXXXXXXAGYKLLAVA 204
           INENDLFK DWRSRSKVQVLQY+F KWT AFLVGLLTG+            AGYK+LAV 
Sbjct: 64  INENDLFKHDWRSRSKVQVLQYIFWKWTLAFLVGLLTGLIATFINLAVENIAGYKILAVV 123

Query: 203 NYIDKER 183
           ++I+ +R
Sbjct: 124 HFIENKR 130


>ref|XP_002509531.1| chloride channel clc, putative [Ricinus communis]
           gi|223549430|gb|EEF50918.1| chloride channel clc,
           putative [Ricinus communis]
          Length = 787

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 43/67 (64%), Positives = 48/67 (71%)
 Frame = -2

Query: 383 INENDLFKQDWRSRSKVQVLQYVFLKWTFAFLVGLLTGVXXXXXXXXXXXXAGYKLLAVA 204
           INENDLFK DWRSRS VQ+LQY+FLKW  AFLVGLLTG+            AGYKLLAV 
Sbjct: 66  INENDLFKHDWRSRSNVQILQYIFLKWILAFLVGLLTGLIATLINLAVENIAGYKLLAVV 125

Query: 203 NYIDKER 183
            +I+ ER
Sbjct: 126 RFIENER 132


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