BLASTX nr result

ID: Bupleurum21_contig00006859 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00006859
         (292 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28221.3| unnamed protein product [Vitis vinifera]               84   2e-14
ref|XP_002285309.1| PREDICTED: blue copper protein-like [Vitis v...    84   2e-14
gb|AFK40462.1| unknown [Medicago truncatula]                           74   1e-11
ref|XP_003609366.1| Blue copper protein [Medicago truncatula] gi...    74   1e-11
gb|AFK33414.1| unknown [Lotus japonicus]                               72   4e-11

>emb|CBI28221.3| unnamed protein product [Vitis vinifera]
          Length = 225

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 37/77 (48%), Positives = 55/77 (71%)
 Frame = +1

Query: 58  RLNMVLLFCLAVMVMFQMQSSYAQKTHNLAWVIPTDANAYTTWAASQTFAVGDTLVFNFT 237
           R+NMVL+  +A  V+ +  +   +  + L+W +P +  AY+TWA++ TF VGDTLVFNFT
Sbjct: 4   RVNMVLVVLVAASVLHRTAAETYEVGNELSWRVPPNTTAYSTWASAYTFRVGDTLVFNFT 63

Query: 238 TGAHTAAQVTKRAYDAC 288
           TG+H  A+VTK A++AC
Sbjct: 64  TGSHDVAKVTKEAFNAC 80


>ref|XP_002285309.1| PREDICTED: blue copper protein-like [Vitis vinifera]
          Length = 172

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 37/77 (48%), Positives = 55/77 (71%)
 Frame = +1

Query: 58  RLNMVLLFCLAVMVMFQMQSSYAQKTHNLAWVIPTDANAYTTWAASQTFAVGDTLVFNFT 237
           R+NMVL+  +A  V+ +  +   +  + L+W +P +  AY+TWA++ TF VGDTLVFNFT
Sbjct: 4   RVNMVLVVLVAASVLHRTAAETYEVGNELSWRVPPNTTAYSTWASAYTFRVGDTLVFNFT 63

Query: 238 TGAHTAAQVTKRAYDAC 288
           TG+H  A+VTK A++AC
Sbjct: 64  TGSHDVAKVTKEAFNAC 80


>gb|AFK40462.1| unknown [Medicago truncatula]
          Length = 229

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 37/78 (47%), Positives = 49/78 (62%), Gaps = 5/78 (6%)
 Frame = +1

Query: 70  VLLFCLAVMVMFQMQSSYAQKTH----NLAWVIPTD-ANAYTTWAASQTFAVGDTLVFNF 234
           VL+F L  +       S+AQ  H       W IPT+ A+ YT WA+++TF VGDTLVFN+
Sbjct: 7   VLVFVLLAVAANLFHGSFAQTRHVVGDTTGWTIPTNGASFYTNWASNKTFTVGDTLVFNY 66

Query: 235 TTGAHTAAQVTKRAYDAC 288
            +G H  A+VTK AYD+C
Sbjct: 67  ASGQHDVAKVTKTAYDSC 84


>ref|XP_003609366.1| Blue copper protein [Medicago truncatula]
           gi|355510421|gb|AES91563.1| Blue copper protein
           [Medicago truncatula]
          Length = 370

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 37/78 (47%), Positives = 49/78 (62%), Gaps = 5/78 (6%)
 Frame = +1

Query: 70  VLLFCLAVMVMFQMQSSYAQKTH----NLAWVIPTD-ANAYTTWAASQTFAVGDTLVFNF 234
           VL+F L  +       S+AQ  H       W IPT+ A+ YT WA+++TF VGDTLVFN+
Sbjct: 7   VLVFVLLAVAANLFHGSFAQTRHVVGDTTGWTIPTNGASFYTNWASNKTFTVGDTLVFNY 66

Query: 235 TTGAHTAAQVTKRAYDAC 288
            +G H  A+VTK AYD+C
Sbjct: 67  ASGQHDVAKVTKTAYDSC 84



 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 26/50 (52%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
 Frame = +1

Query: 142 LAWVIPTDANA-YTTWAASQTFAVGDTLVFNFTTGAHTAAQVTKRAYDAC 288
           + W+IP++  A YTTWA+ ++F VGD LVFNF   AH   +VTK  YD+C
Sbjct: 197 IGWIIPSNGTAAYTTWASGKSFKVGDILVFNFQLNAHNVEEVTKEKYDSC 246


>gb|AFK33414.1| unknown [Lotus japonicus]
          Length = 203

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 36/83 (43%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
 Frame = +1

Query: 52  SIRLNMVLLFCLAVMVMFQMQSSYAQKTH----NLAWVIPTDANAYTTWAASQTFAVGDT 219
           ++ +N +LL  LA   +F   S  AQ  H    +  W +P + + YT+WAA  TFAVGDT
Sbjct: 2   AMNMNALLLALLAATALFHCSS--AQTRHVVGDSAGWFVPGNTSFYTSWAAKNTFAVGDT 59

Query: 220 LVFNFTTGAHTAAQVTKRAYDAC 288
           LVFN+   AH   +VTK  YD+C
Sbjct: 60  LVFNYAASAHNVEEVTKTNYDSC 82


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