BLASTX nr result
ID: Bupleurum21_contig00006842
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00006842
(2163 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002270340.2| PREDICTED: uncharacterized protein LOC100232... 681 0.0
gb|AEV43360.1| RNA recognition motif protein 1 [Citrus sinensis] 676 0.0
ref|XP_002526479.1| RNA binding protein, putative [Ricinus commu... 630 e-178
ref|XP_004166610.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri... 621 e-175
ref|XP_004133977.1| PREDICTED: uncharacterized protein LOC101208... 621 e-175
>ref|XP_002270340.2| PREDICTED: uncharacterized protein LOC100232913 [Vitis vinifera]
gi|297734640|emb|CBI16691.3| unnamed protein product
[Vitis vinifera]
Length = 812
Score = 681 bits (1757), Expect = 0.0
Identities = 367/545 (67%), Positives = 399/545 (73%), Gaps = 3/545 (0%)
Frame = +2
Query: 404 IFVGGLDKDATEVDLRKVFSEVGEVTEVRLMMNPQTNKNKGFAFLRFATVEQAKRACSDL 583
+FVGGLDKDATE DLRKVFS+VGEVTEVRLMMNPQT KNKGFAFLRFATVEQAKRA ++L
Sbjct: 234 VFVGGLDKDATEDDLRKVFSQVGEVTEVRLMMNPQTKKNKGFAFLRFATVEQAKRAVTEL 293
Query: 584 KNPVVNGKKCGVTQSQDSDTLFLGNICKTWTKEALKEKLKHYGVDNIEDLTLVEDSNNDG 763
KNPVVNGK+CGVT SQDSDTLFLGNICKTWTKEALKEKLKHYGV+N+EDLTLVEDSNN+G
Sbjct: 294 KNPVVNGKQCGVTPSQDSDTLFLGNICKTWTKEALKEKLKHYGVENVEDLTLVEDSNNEG 353
Query: 764 MNRGFAFLEFSSRSDAMDSFKRLQKRDVVFGVDRPAKVSFADSFIDPGDEIMAQVKTVFV 943
MNRGFAFLEFSSRSDAMD+FKRLQKRDVVFGVDR AKVSFADSFIDPGDEIMAQVKTVF+
Sbjct: 354 MNRGFAFLEFSSRSDAMDAFKRLQKRDVVFGVDRTAKVSFADSFIDPGDEIMAQVKTVFI 413
Query: 944 DGLPASWDEDRVRELLKKYGKIDKIELARNMPSAKRKDFGFITFDTHDAAVTCAKSINNT 1123
DGLPASWDEDRVRELLKKYG+I+KIELARNMPSAKRKDFGF+TFDTHDAAVTCAKSINN
Sbjct: 414 DGLPASWDEDRVRELLKKYGEIEKIELARNMPSAKRKDFGFVTFDTHDAAVTCAKSINNA 473
Query: 1124 ELGEGESKAKVRARLSRPLQRGKGKRISRGDFYP-RHGAIHGFKGPWGRPVPPRSLPVRE 1300
ELGEGE+KAKVRARLSRPLQRGKGK ISRGDF P R G + G +G W RP RS P R
Sbjct: 474 ELGEGENKAKVRARLSRPLQRGKGKHISRGDFRPGRGGPVRGVRGSWARPA-LRSFPGRG 532
Query: 1301 SRGVRGHLPPINRGLRRPPAFRDRREILARPPRGRTSYGPVPRSYDRRPPPVPXXXXXXX 1480
+RG+ LPP ++RP FRDRR ++A PPRGR P RSYDRR PVP
Sbjct: 533 ARGLGPRLPP--AAVKRPIGFRDRRPVMAMPPRGR-PLPPPSRSYDRR-APVPAYPKPNL 588
Query: 1481 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPPRSRTALDYSSRVVAEXXXXXXXXXXX 1660
P RSR A+DY SRV E
Sbjct: 589 KRDYGRREEV----------------------PLRSRPAVDYGSRVAPERRPSYRDDYAT 626
Query: 1661 E-SGYVDLPXXXXXXXXXXXYDDDGYVQRFER-PHPSYREGRPRDYESVPGSKRPYAALD 1834
SGY D+P Y+DD Y QRFER P PSYREGRPRDY+S+ GSKRPY ALD
Sbjct: 627 RGSGYSDIPRNTSRTAARRTYEDDAYGQRFERPPPPSYREGRPRDYDSIAGSKRPYGALD 686
Query: 1835 DVPPQYAEPVLRQSRPRLEYEPRGSTSHYGDSYSDSAXXXXXXXXXXXXXXXXXQDSHAL 2014
DVPP+YA+ +RQSR RL+YE S YGD+Y D QDSH L
Sbjct: 687 DVPPRYADASVRQSRARLDYEMSAGASQYGDAYGD-RLGRSNLGYGGSRSSMSSQDSHGL 745
Query: 2015 YSRRQ 2029
YS RQ
Sbjct: 746 YSSRQ 750
>gb|AEV43360.1| RNA recognition motif protein 1 [Citrus sinensis]
Length = 775
Score = 676 bits (1744), Expect = 0.0
Identities = 355/542 (65%), Positives = 391/542 (72%)
Frame = +2
Query: 404 IFVGGLDKDATEVDLRKVFSEVGEVTEVRLMMNPQTNKNKGFAFLRFATVEQAKRACSDL 583
+FVGGLDKD DLRKVFS+VGEVTEVRLMMNPQT KNKGFAFLRFATVEQA++A ++L
Sbjct: 199 VFVGGLDKDVVGDDLRKVFSQVGEVTEVRLMMNPQTKKNKGFAFLRFATVEQARQAVTEL 258
Query: 584 KNPVVNGKKCGVTQSQDSDTLFLGNICKTWTKEALKEKLKHYGVDNIEDLTLVEDSNNDG 763
KNPV+NGK+CGVT SQDSDTLFLGNICKTWTKEALKEKLKHYGVDN+EDLTLVEDSNN+G
Sbjct: 259 KNPVINGKQCGVTPSQDSDTLFLGNICKTWTKEALKEKLKHYGVDNVEDLTLVEDSNNEG 318
Query: 764 MNRGFAFLEFSSRSDAMDSFKRLQKRDVVFGVDRPAKVSFADSFIDPGDEIMAQVKTVFV 943
MNRGFAFLEFSSRSDAMD+FKRLQKRDV+FGVDRPAKVSFADSFIDPGDEIMAQVKTVFV
Sbjct: 319 MNRGFAFLEFSSRSDAMDAFKRLQKRDVLFGVDRPAKVSFADSFIDPGDEIMAQVKTVFV 378
Query: 944 DGLPASWDEDRVRELLKKYGKIDKIELARNMPSAKRKDFGFITFDTHDAAVTCAKSINNT 1123
DGLPASWDEDRVRELLK YG+I KIELARNMPSAKRKDFGF+TFDTHDAAVTCAKSINN
Sbjct: 379 DGLPASWDEDRVRELLKNYGEITKIELARNMPSAKRKDFGFVTFDTHDAAVTCAKSINNA 438
Query: 1124 ELGEGESKAKVRARLSRPLQRGKGKRISRGDFYPRHGAIHGFKGPWGRPVPPRSLPVRES 1303
ELGEG++KAKVRARLSRPLQRGKGK SRGDF G +G WG P PRSLP R +
Sbjct: 439 ELGEGDNKAKVRARLSRPLQRGKGKHASRGDFRSGRGTGRATRGSWGLP-SPRSLPGRSA 497
Query: 1304 RGVRGHLPPINRGLRRPPAFRDRREILARPPRGRTSYGPVPRSYDRRPPPVPXXXXXXXX 1483
RG+ LPP + ++RP RDRR I++ R R P PRSYDRR PVP
Sbjct: 498 RGIGSRLPPAS--VKRPVPVRDRRPIMSMTARARPMPPPPPRSYDRR-APVP-------- 546
Query: 1484 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPPRSRTALDYSSRVVAEXXXXXXXXXXXE 1663
PPPRSR +DY SRVV +
Sbjct: 547 -------------SYPKPGLKREYGRRDEVPPPRSRAPVDYGSRVVPDRRPYRDEYTSRG 593
Query: 1664 SGYVDLPXXXXXXXXXXXYDDDGYVQRFERPHPSYREGRPRDYESVPGSKRPYAALDDVP 1843
SGY D+P Y DDGY QRFERP PSYREGR RDYE+V GSKRPY+ +DDVP
Sbjct: 594 SGYPDMPRSTSRGAARRPYVDDGYAQRFERPPPSYREGRARDYETVSGSKRPYSVVDDVP 653
Query: 1844 PQYAEPVLRQSRPRLEYEPRGSTSHYGDSYSDSAXXXXXXXXXXXXXXXXXQDSHALYSR 2023
P+YA+P +R SR RL+Y+ G YGD+Y D QDSH LYS
Sbjct: 654 PRYADPGVRHSRARLDYDLGGGAPQYGDAYGD-RMGRSNLGYGGSRSSISSQDSHGLYSS 712
Query: 2024 RQ 2029
RQ
Sbjct: 713 RQ 714
>ref|XP_002526479.1| RNA binding protein, putative [Ricinus communis]
gi|223534154|gb|EEF35870.1| RNA binding protein, putative
[Ricinus communis]
Length = 784
Score = 630 bits (1624), Expect = e-178
Identities = 343/546 (62%), Positives = 385/546 (70%), Gaps = 4/546 (0%)
Frame = +2
Query: 404 IFVGGLDKDATEVDLRKVFSEVGEVTEVRLMMNPQTNKNKGFAFLRFATVEQAKRACSDL 583
+FVGGLDKDATE DLRKVF+ VGEVTEVRLMMNPQT KNKGFAFLRF+TVEQAK+A ++L
Sbjct: 215 VFVGGLDKDATEDDLRKVFTRVGEVTEVRLMMNPQTKKNKGFAFLRFSTVEQAKKAVTEL 274
Query: 584 KNPVVNGKKCGVTQSQDSDTLFLGNICKTWTKEALKEKLKHYGVDNIEDLTLVEDSNNDG 763
KNPV+NGK+CGVT SQDSDTLFLGNICKTWTKEALKEKLKHYGV+N+ED+TLVEDSNN+G
Sbjct: 275 KNPVINGKQCGVTPSQDSDTLFLGNICKTWTKEALKEKLKHYGVENVEDVTLVEDSNNEG 334
Query: 764 MNRGFAFLEFSSRSDAMDSFKRLQKRDVVFGVDRPAKVSFADSFIDPGDEIMAQVKTVFV 943
MNRGFAFLEFSSRSDAMD+FKRLQKRDV+FGVDRPAKVSFADSFIDPGDEIMAQVKTVFV
Sbjct: 335 MNRGFAFLEFSSRSDAMDAFKRLQKRDVLFGVDRPAKVSFADSFIDPGDEIMAQVKTVFV 394
Query: 944 DGLPASWDEDRVRELLKKYGKIDKIELARNMPSAKRKDFGFITFDTHDAAVTCAKSINNT 1123
DGLPASWDEDRVRELLKK+G+I+KIELARNMPSAKRKDFGF+TFD+HDAAVTCAKSINN
Sbjct: 395 DGLPASWDEDRVRELLKKFGEIEKIELARNMPSAKRKDFGFVTFDSHDAAVTCAKSINNA 454
Query: 1124 ELGEGESKAKVRARLSRPLQRGKGKRISRGDFYPRHGAIHGFKGPWGRPVPPRSLPVRES 1303
ELGEG++KAKVRARLSRPLQRGKGK SR DF +G +GPW RPV
Sbjct: 455 ELGEGDNKAKVRARLSRPLQRGKGKHASRADFRSWYGG-RTARGPWVRPV---------- 503
Query: 1304 RGVRGHLPPINRGLRRPPAFRDRR-EILARPPRGRTSYGPVPRSYDRRPPPVPXXXXXXX 1480
RG+ P + ++R RDRR +++ P RGR P R+YDRR P
Sbjct: 504 RGIASRAAPTS--VKRHVGLRDRRPPVMSMPVRGR-PLPPPNRTYDRRAP---------- 550
Query: 1481 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPPRSRTALDYSSRVVAEXXXXXXXXXXX 1660
PPPRSR +DYSSR VAE
Sbjct: 551 ------------APSYPKSSLKRDYGRREELPPPRSRAPVDYSSRSVAERRQSYRDDYSS 598
Query: 1661 E-SGYVDLPXXXXXXXXXXXYDDDGYVQRFERPHPSYREGRPRDYESVPGSKRPYAALDD 1837
SGY D+P Y DDGY QR ER PSYREGR RDY+S+ GSKRPY+A+DD
Sbjct: 599 RGSGYSDIPRGTSRSSARRAYVDDGYGQRLERHPPSYREGRARDYDSISGSKRPYSAMDD 658
Query: 1838 VPPQYAE--PVLRQSRPRLEYEPRGSTSHYGDSYSDSAXXXXXXXXXXXXXXXXXQDSHA 2011
VPP+YA+ R SR RL+YE S S YGD+Y D QDSH
Sbjct: 659 VPPRYADGGAGTRHSRARLDYELGPSASQYGDAYGD-RIGRSSVGYGGSRSSLSSQDSHG 717
Query: 2012 LYSRRQ 2029
LY+ RQ
Sbjct: 718 LYTSRQ 723
>ref|XP_004166610.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101228505
[Cucumis sativus]
Length = 788
Score = 621 bits (1601), Expect = e-175
Identities = 331/512 (64%), Positives = 376/512 (73%), Gaps = 2/512 (0%)
Frame = +2
Query: 404 IFVGGLDKDATEVDLRKVFSEVGEVTEVRLMMNPQTNKNKGFAFLRFATVEQAKRACSDL 583
+FVGGLDKD E DL+KVFS VGEVTEVRLMMNPQT KNKGFAFLRFATVE+AKRA S+L
Sbjct: 232 VFVGGLDKDVKEEDLKKVFSAVGEVTEVRLMMNPQTKKNKGFAFLRFATVEEAKRAVSEL 291
Query: 584 KNPVVNGKKCGVTQSQDSDTLFLGNICKTWTKEALKEKLKHYGVDNIEDLTLVEDSNNDG 763
KNPV+NGK+CGVT SQDSDTLFLGNICKTW K+ALKEKLKHYGVDN+EDLTLVEDSNN+G
Sbjct: 292 KNPVINGKQCGVTPSQDSDTLFLGNICKTWKKDALKEKLKHYGVDNVEDLTLVEDSNNEG 351
Query: 764 MNRGFAFLEFSSRSDAMDSFKRLQKRDVVFGVDRPAKVSFADSFIDPGDEIMAQVKTVFV 943
NRGFAFLEFSSRSDAMD+FKRLQKRDVVFGVDRPAKVSFADSFIDPGDEIMAQVKTVFV
Sbjct: 352 SNRGFAFLEFSSRSDAMDAFKRLQKRDVVFGVDRPAKVSFADSFIDPGDEIMAQVKTVFV 411
Query: 944 DGLPASWDEDRVRELLKKYGKIDKIELARNMPSAKRKDFGFITFDTHDAAVTCAKSINNT 1123
D LPASWDE+ VR LLKKYG+I+KIELARNMPSAKRKDFGF+TFDTHDAAV+CAKSINN+
Sbjct: 412 DSLPASWDEEFVRGLLKKYGEIEKIELARNMPSAKRKDFGFVTFDTHDAAVSCAKSINNS 471
Query: 1124 ELGEGESKAKVRARLSRPLQRGKGKRISRGDFYPRHGAIHG-FKGPWGRPVPPRSLPVRE 1300
ELGEG++KAKVRARLSRPLQRGKGK SR D++P G G +G W RP PRS+P+R
Sbjct: 472 ELGEGDNKAKVRARLSRPLQRGKGKHASRTDYWP--GRTTGRVRGSWTRPA-PRSIPIRG 528
Query: 1301 SRGVRGHLPPINRGLRRPPAFRDRREILARPPRGRTSYGPVPRSYDRRPPPVPXXXXXXX 1480
RGV HLPP++ ++RP RDRR ++A PPRGR V RSYDR PP
Sbjct: 529 VRGVGSHLPPVS--VKRPSGVRDRRPVIAVPPRGR-PVAAVARSYDRGPPVASYSKSSLK 585
Query: 1481 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPPRSRTALDYSSRVVAEXXXXXXXXXXX 1660
P RSR +DY+SRVV E
Sbjct: 586 RDYGRREELH----------------------PSRSRMLVDYASRVVPERNPSYRDDYAS 623
Query: 1661 ESGYVDLPXXXXXXXXXXXYDDDGYVQRFER-PHPSYREGRPRDYESVPGSKRPYAALDD 1837
+ P Y DDGY +RFER P PSYR+ R RDY+++ GSKRPY+++ D
Sbjct: 624 RAAAFSDP--PRRDAPRRAYVDDGYSRRFERPPPPSYRDVRARDYDALIGSKRPYSSMSD 681
Query: 1838 VPPQYAEPVLRQSRPRLEYEPRGSTSHYGDSY 1933
VPP YA+ +RQSR RL+Y+ S YGD+Y
Sbjct: 682 VPPAYADTGVRQSRSRLDYDYGAGASQYGDAY 713
>ref|XP_004133977.1| PREDICTED: uncharacterized protein LOC101208921 [Cucumis sativus]
Length = 788
Score = 621 bits (1601), Expect = e-175
Identities = 331/512 (64%), Positives = 376/512 (73%), Gaps = 2/512 (0%)
Frame = +2
Query: 404 IFVGGLDKDATEVDLRKVFSEVGEVTEVRLMMNPQTNKNKGFAFLRFATVEQAKRACSDL 583
+FVGGLDKD E DL+KVFS VGEVTEVRLMMNPQT KNKGFAFLRFATVE+AKRA S+L
Sbjct: 232 VFVGGLDKDVKEEDLKKVFSAVGEVTEVRLMMNPQTKKNKGFAFLRFATVEEAKRAVSEL 291
Query: 584 KNPVVNGKKCGVTQSQDSDTLFLGNICKTWTKEALKEKLKHYGVDNIEDLTLVEDSNNDG 763
KNPV+NGK+CGVT SQDSDTLFLGNICKTW K+ALKEKLKHYGVDN+EDLTLVEDSNN+G
Sbjct: 292 KNPVINGKQCGVTPSQDSDTLFLGNICKTWKKDALKEKLKHYGVDNVEDLTLVEDSNNEG 351
Query: 764 MNRGFAFLEFSSRSDAMDSFKRLQKRDVVFGVDRPAKVSFADSFIDPGDEIMAQVKTVFV 943
NRGFAFLEFSSRSDAMD+FKRLQKRDVVFGVDRPAKVSFADSFIDPGDEIMAQVKTVFV
Sbjct: 352 SNRGFAFLEFSSRSDAMDAFKRLQKRDVVFGVDRPAKVSFADSFIDPGDEIMAQVKTVFV 411
Query: 944 DGLPASWDEDRVRELLKKYGKIDKIELARNMPSAKRKDFGFITFDTHDAAVTCAKSINNT 1123
D LPASWDE+ VR LLKKYG+I+KIELARNMPSAKRKDFGF+TFDTHDAAV+CAKSINN+
Sbjct: 412 DSLPASWDEEFVRGLLKKYGEIEKIELARNMPSAKRKDFGFVTFDTHDAAVSCAKSINNS 471
Query: 1124 ELGEGESKAKVRARLSRPLQRGKGKRISRGDFYPRHGAIHG-FKGPWGRPVPPRSLPVRE 1300
ELGEG++KAKVRARLSRPLQRGKGK SR D++P G G +G W RP PRS+P+R
Sbjct: 472 ELGEGDNKAKVRARLSRPLQRGKGKHASRTDYWP--GRTTGRVRGSWTRPA-PRSIPIRG 528
Query: 1301 SRGVRGHLPPINRGLRRPPAFRDRREILARPPRGRTSYGPVPRSYDRRPPPVPXXXXXXX 1480
RGV HLPP++ ++RP RDRR ++A PPRGR V RSYDR PP
Sbjct: 529 VRGVGSHLPPVS--VKRPSGVRDRRPVIAVPPRGR-PVAAVARSYDRGPPVASYSKSSLK 585
Query: 1481 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPPRSRTALDYSSRVVAEXXXXXXXXXXX 1660
P RSR +DY+SRVV E
Sbjct: 586 RDYGRREELH----------------------PSRSRMLVDYASRVVPERNPSYRDDYAS 623
Query: 1661 ESGYVDLPXXXXXXXXXXXYDDDGYVQRFER-PHPSYREGRPRDYESVPGSKRPYAALDD 1837
+ P Y DDGY +RFER P PSYR+ R RDY+++ GSKRPY+++ D
Sbjct: 624 RAAAFSDP--PRRDAPRRAYVDDGYSRRFERPPPPSYRDVRARDYDALIGSKRPYSSMSD 681
Query: 1838 VPPQYAEPVLRQSRPRLEYEPRGSTSHYGDSY 1933
VPP YA+ +RQSR RL+Y+ S YGD+Y
Sbjct: 682 VPPAYADTGVRQSRSRLDYDYGAGASQYGDAY 713