BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00006839
         (369 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634143.1| PREDICTED: pentatricopeptide repeat-containi...   174   7e-42
ref|XP_003635646.1| PREDICTED: pentatricopeptide repeat-containi...   172   2e-41
emb|CBI23556.3| unnamed protein product [Vitis vinifera]              172   2e-41
ref|XP_003635637.1| PREDICTED: pentatricopeptide repeat-containi...   171   6e-41
emb|CBI41122.3| unnamed protein product [Vitis vinifera]              171   6e-41

>ref|XP_003634143.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like [Vitis vinifera]
          Length = 631

 Score =  174 bits (441), Expect = 7e-42
 Identities = 85/125 (68%), Positives = 105/125 (84%), Gaps = 2/125 (1%)
 Frame = -1

Query: 369 CSLLDMYAK--SGGSIDDSSEVFRRLSDHNCMSYTAMITAFVQSNGLDKEAIEMYRKMIE 196
           CSL+DMYAK  + GS+DDS +VF R+ +HN MS+TA+ITA+VQS   DKEAIE++ KMI 
Sbjct: 319 CSLVDMYAKCAADGSVDDSRKVFERMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMIS 378

Query: 195 GGVLPNEITFSSLLKACGNLANAKTGEQIYNHAVKLGFLSVNCVGNSLVSMYARSGRMED 16
           G + PN  +FSS+LKACGNL++  TGEQ+Y++AVKLG  SVNCVGNSL+SMYARSGRMED
Sbjct: 379 GHIWPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMED 438

Query: 15  ARKAF 1
           ARKAF
Sbjct: 439 ARKAF 443



 Score = 91.3 bits (225), Expect = 8e-17
 Identities = 46/126 (36%), Positives = 76/126 (60%), Gaps = 3/126 (2%)
 Frame = -1

Query: 369 CSLLDMYAKSGGSIDDSSEVFRRLSDHNCMSYTAMITAFVQSNGLDKEAIEMYRKMIEGG 190
           C L+DM+ K  G +  + +VF ++ + N +++T MIT F Q  G  ++AI+++  M   G
Sbjct: 217 CELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMITRFAQL-GCARDAIDLFLDMELSG 275

Query: 189 VLPNEITFSSLLKACGNLANAKTGEQIYNHAVKLGFLSVNCVGNSLVSMYAR---SGRME 19
            +P+  T+SS+L AC  L     G+Q+++  ++LG     CVG SLV MYA+    G ++
Sbjct: 276 YVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVD 335

Query: 18  DARKAF 1
           D+RK F
Sbjct: 336 DSRKVF 341



 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 41/125 (32%), Positives = 75/125 (60%), Gaps = 3/125 (2%)
 Frame = -1

Query: 366 SLLDMYAKSGGSIDDSSEVFRRLSD-HNCMSYTAMITAFVQSNGLDKEAIEMYRKMIEGG 190
           +L+ +Y+K G + + +  +F  + +  + +S++AM++ F  +N ++ +AI  +  M+E G
Sbjct: 115 TLISLYSKCGDT-ETARLIFEGMGNKRDLVSWSAMVSCFA-NNSMELQAIWTFLDMLELG 172

Query: 189 VLPNEITFSSLLKACGNLANAKTGEQIYNHAVKLGFLSVN-CVGNSLVSMYAR-SGRMED 16
             PNE  F+++++AC N  +A  GE IY   VK G+L  + CVG  L+ M+ + SG +  
Sbjct: 173 FYPNEYCFAAVIRACSNANHAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGS 232

Query: 15  ARKAF 1
           A K F
Sbjct: 233 AYKVF 237


>ref|XP_003635646.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like, partial [Vitis vinifera]
          Length = 809

 Score =  172 bits (437), Expect = 2e-41
 Identities = 84/125 (67%), Positives = 105/125 (84%), Gaps = 2/125 (1%)
 Frame = -1

Query: 369 CSLLDMYAK--SGGSIDDSSEVFRRLSDHNCMSYTAMITAFVQSNGLDKEAIEMYRKMIE 196
           CSL+DMYAK  + GS+DDS +VF ++ +HN MS+TA+ITA+VQS   DKEAIE++ KMI 
Sbjct: 270 CSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMIS 329

Query: 195 GGVLPNEITFSSLLKACGNLANAKTGEQIYNHAVKLGFLSVNCVGNSLVSMYARSGRMED 16
           G + PN  +FSS+LKACGNL++  TGEQ+Y++AVKLG  SVNCVGNSL+SMYARSGRMED
Sbjct: 330 GHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMED 389

Query: 15  ARKAF 1
           ARKAF
Sbjct: 390 ARKAF 394



 Score = 91.3 bits (225), Expect = 8e-17
 Identities = 46/126 (36%), Positives = 76/126 (60%), Gaps = 3/126 (2%)
 Frame = -1

Query: 369 CSLLDMYAKSGGSIDDSSEVFRRLSDHNCMSYTAMITAFVQSNGLDKEAIEMYRKMIEGG 190
           C L+DM+ K  G +  + +VF ++ + N +++T MIT F Q  G  ++AI+++  M   G
Sbjct: 168 CELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMITRFAQL-GCARDAIDLFLDMELSG 226

Query: 189 VLPNEITFSSLLKACGNLANAKTGEQIYNHAVKLGFLSVNCVGNSLVSMYAR---SGRME 19
            +P+  T+SS+L AC  L     G+Q+++  ++LG     CVG SLV MYA+    G ++
Sbjct: 227 YVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVD 286

Query: 18  DARKAF 1
           D+RK F
Sbjct: 287 DSRKVF 292



 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 41/122 (33%), Positives = 73/122 (59%)
 Frame = -1

Query: 366 SLLDMYAKSGGSIDDSSEVFRRLSDHNCMSYTAMITAFVQSNGLDKEAIEMYRKMIEGGV 187
           SL+ MYA+SG  ++D+ + F  L + N +SY A++  + + N   +EA  ++ ++ + G+
Sbjct: 376 SLISMYARSG-RMEDARKAFDILFEKNLVSYNAIVDGYAK-NLKSEEAFLLFNEIADTGI 433

Query: 186 LPNEITFSSLLKACGNLANAKTGEQIYNHAVKLGFLSVNCVGNSLVSMYARSGRMEDARK 7
             +  TF+SLL    ++     GEQI+   +K G+ S  C+ N+L+SMY+R G +E A +
Sbjct: 434 GISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQ 493

Query: 6   AF 1
            F
Sbjct: 494 VF 495



 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 34/92 (36%), Positives = 59/92 (64%)
 Frame = -1

Query: 366 SLLDMYAKSGGSIDDSSEVFRRLSDHNCMSYTAMITAFVQSNGLDKEAIEMYRKMIEGGV 187
           +L+ MY++ G +I+ + +VF  + D N +S+T+MIT F + +G    A+EM+ KM+E G 
Sbjct: 477 ALISMYSRCG-NIEAAFQVFNEMEDRNVISWTSMITGFAK-HGFATRALEMFHKMLETGT 534

Query: 186 LPNEITFSSLLKACGNLANAKTGEQIYNHAVK 91
            PNEIT+ ++L AC ++     G++ +N   K
Sbjct: 535 KPNEITYVAVLSACSHVGMISEGQKHFNSMYK 566



 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 41/125 (32%), Positives = 74/125 (59%), Gaps = 3/125 (2%)
 Frame = -1

Query: 366 SLLDMYAKSGGSIDDSSEVFRRLSD-HNCMSYTAMITAFVQSNGLDKEAIEMYRKMIEGG 190
           +L+ +Y+K G + + +  +F  + +  + +S++AM++ F  +N ++ +AI  +  M+E G
Sbjct: 66  TLISLYSKCGDT-ETARLIFEGMGNKRDLVSWSAMVSCFA-NNSMEWQAIWTFLDMLELG 123

Query: 189 VLPNEITFSSLLKACGNLANAKTGEQIYNHAVKLGFLSVN-CVGNSLVSMYAR-SGRMED 16
             PNE  F+++++AC N   A  GE IY   VK G+L  + CVG  L+ M+ + SG +  
Sbjct: 124 FYPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGS 183

Query: 15  ARKAF 1
           A K F
Sbjct: 184 AYKVF 188


>emb|CBI23556.3| unnamed protein product [Vitis vinifera]
          Length = 827

 Score =  172 bits (437), Expect = 2e-41
 Identities = 84/125 (67%), Positives = 105/125 (84%), Gaps = 2/125 (1%)
 Frame = -1

Query: 369 CSLLDMYAK--SGGSIDDSSEVFRRLSDHNCMSYTAMITAFVQSNGLDKEAIEMYRKMIE 196
           CSL+DMYAK  + GS+DDS +VF ++ +HN MS+TA+ITA+VQS   DKEAIE++ KMI 
Sbjct: 288 CSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMIS 347

Query: 195 GGVLPNEITFSSLLKACGNLANAKTGEQIYNHAVKLGFLSVNCVGNSLVSMYARSGRMED 16
           G + PN  +FSS+LKACGNL++  TGEQ+Y++AVKLG  SVNCVGNSL+SMYARSGRMED
Sbjct: 348 GHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMED 407

Query: 15  ARKAF 1
           ARKAF
Sbjct: 408 ARKAF 412



 Score = 91.3 bits (225), Expect = 8e-17
 Identities = 46/126 (36%), Positives = 76/126 (60%), Gaps = 3/126 (2%)
 Frame = -1

Query: 369 CSLLDMYAKSGGSIDDSSEVFRRLSDHNCMSYTAMITAFVQSNGLDKEAIEMYRKMIEGG 190
           C L+DM+ K  G +  + +VF ++ + N +++T MIT F Q  G  ++AI+++  M   G
Sbjct: 186 CELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMITRFAQL-GCARDAIDLFLDMELSG 244

Query: 189 VLPNEITFSSLLKACGNLANAKTGEQIYNHAVKLGFLSVNCVGNSLVSMYAR---SGRME 19
            +P+  T+SS+L AC  L     G+Q+++  ++LG     CVG SLV MYA+    G ++
Sbjct: 245 YVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVD 304

Query: 18  DARKAF 1
           D+RK F
Sbjct: 305 DSRKVF 310



 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 41/122 (33%), Positives = 73/122 (59%)
 Frame = -1

Query: 366 SLLDMYAKSGGSIDDSSEVFRRLSDHNCMSYTAMITAFVQSNGLDKEAIEMYRKMIEGGV 187
           SL+ MYA+SG  ++D+ + F  L + N +SY A++  + + N   +EA  ++ ++ + G+
Sbjct: 394 SLISMYARSG-RMEDARKAFDILFEKNLVSYNAIVDGYAK-NLKSEEAFLLFNEIADTGI 451

Query: 186 LPNEITFSSLLKACGNLANAKTGEQIYNHAVKLGFLSVNCVGNSLVSMYARSGRMEDARK 7
             +  TF+SLL    ++     GEQI+   +K G+ S  C+ N+L+SMY+R G +E A +
Sbjct: 452 GISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQ 511

Query: 6   AF 1
            F
Sbjct: 512 VF 513



 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 34/92 (36%), Positives = 59/92 (64%)
 Frame = -1

Query: 366 SLLDMYAKSGGSIDDSSEVFRRLSDHNCMSYTAMITAFVQSNGLDKEAIEMYRKMIEGGV 187
           +L+ MY++ G +I+ + +VF  + D N +S+T+MIT F + +G    A+EM+ KM+E G 
Sbjct: 495 ALISMYSRCG-NIEAAFQVFNEMEDRNVISWTSMITGFAK-HGFATRALEMFHKMLETGT 552

Query: 186 LPNEITFSSLLKACGNLANAKTGEQIYNHAVK 91
            PNEIT+ ++L AC ++     G++ +N   K
Sbjct: 553 KPNEITYVAVLSACSHVGMISEGQKHFNSMYK 584



 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 41/125 (32%), Positives = 74/125 (59%), Gaps = 3/125 (2%)
 Frame = -1

Query: 366 SLLDMYAKSGGSIDDSSEVFRRLSD-HNCMSYTAMITAFVQSNGLDKEAIEMYRKMIEGG 190
           +L+ +Y+K G + + +  +F  + +  + +S++AM++ F  +N ++ +AI  +  M+E G
Sbjct: 84  TLISLYSKCGDT-ETARLIFEGMGNKRDLVSWSAMVSCFA-NNSMEWQAIWTFLDMLELG 141

Query: 189 VLPNEITFSSLLKACGNLANAKTGEQIYNHAVKLGFLSVN-CVGNSLVSMYAR-SGRMED 16
             PNE  F+++++AC N   A  GE IY   VK G+L  + CVG  L+ M+ + SG +  
Sbjct: 142 FYPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGS 201

Query: 15  ARKAF 1
           A K F
Sbjct: 202 AYKVF 206


>ref|XP_003635637.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like, partial [Vitis vinifera]
          Length = 629

 Score =  171 bits (433), Expect = 6e-41
 Identities = 83/125 (66%), Positives = 104/125 (83%), Gaps = 2/125 (1%)
 Frame = -1

Query: 369 CSLLDMYAK--SGGSIDDSSEVFRRLSDHNCMSYTAMITAFVQSNGLDKEAIEMYRKMIE 196
           CSL+DMYAK  + GS+DDS +VF ++ +HN MS+TA+ITA+ QS   DKEAIE++ KMI 
Sbjct: 90  CSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYAQSGECDKEAIELFCKMIS 149

Query: 195 GGVLPNEITFSSLLKACGNLANAKTGEQIYNHAVKLGFLSVNCVGNSLVSMYARSGRMED 16
           G + PN  +FSS+LKACGNL++  TGEQ+Y++AVKLG  SVNCVGNSL+SMYARSGRMED
Sbjct: 150 GHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMED 209

Query: 15  ARKAF 1
           ARKAF
Sbjct: 210 ARKAF 214



 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 40/108 (37%), Positives = 66/108 (61%), Gaps = 3/108 (2%)
 Frame = -1

Query: 315 EVFRRLSDHNCMSYTAMITAFVQSNGLDKEAIEMYRKMIEGGVLPNEITFSSLLKACGNL 136
           +VF ++ + N +++T MIT F Q  G  ++AI+++  M   G +P+  T+SS+L AC  L
Sbjct: 6   KVFDKMPERNLVTWTLMITRFAQL-GCARDAIDLFLDMELSGYVPDRFTYSSVLSACTEL 64

Query: 135 ANAKTGEQIYNHAVKLGFLSVNCVGNSLVSMYAR---SGRMEDARKAF 1
                G+Q+++  ++LG     CVG SLV MYA+    G ++D+RK F
Sbjct: 65  GLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVF 112



 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 41/122 (33%), Positives = 73/122 (59%)
 Frame = -1

Query: 366 SLLDMYAKSGGSIDDSSEVFRRLSDHNCMSYTAMITAFVQSNGLDKEAIEMYRKMIEGGV 187
           SL+ MYA+SG  ++D+ + F  L + N +SY A++  + + N   +EA  ++ ++ + G+
Sbjct: 196 SLISMYARSG-RMEDARKAFDILFEKNLVSYNAIVDGYAK-NLKSEEAFLLFNEIADTGI 253

Query: 186 LPNEITFSSLLKACGNLANAKTGEQIYNHAVKLGFLSVNCVGNSLVSMYARSGRMEDARK 7
             +  TF+SLL    ++     GEQI+   +K G+ S  C+ N+L+SMY+R G +E A +
Sbjct: 254 GISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQ 313

Query: 6   AF 1
            F
Sbjct: 314 VF 315



 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 34/92 (36%), Positives = 59/92 (64%)
 Frame = -1

Query: 366 SLLDMYAKSGGSIDDSSEVFRRLSDHNCMSYTAMITAFVQSNGLDKEAIEMYRKMIEGGV 187
           +L+ MY++ G +I+ + +VF  + D N +S+T+MIT F + +G    A+EM+ KM+E G 
Sbjct: 297 ALISMYSRCG-NIEAAFQVFNEMEDRNVISWTSMITGFAK-HGFATRALEMFHKMLETGT 354

Query: 186 LPNEITFSSLLKACGNLANAKTGEQIYNHAVK 91
            PNEIT+ ++L AC ++     G++ +N   K
Sbjct: 355 KPNEITYVAVLSACSHVGMISEGQKHFNSMYK 386


>emb|CBI41122.3| unnamed protein product [Vitis vinifera]
          Length = 634

 Score =  171 bits (433), Expect = 6e-41
 Identities = 83/125 (66%), Positives = 104/125 (83%), Gaps = 2/125 (1%)
 Frame = -1

Query: 369 CSLLDMYAK--SGGSIDDSSEVFRRLSDHNCMSYTAMITAFVQSNGLDKEAIEMYRKMIE 196
           CSL+DMYAK  + GS+DDS +VF ++ +HN MS+TA+ITA+ QS   DKEAIE++ KMI 
Sbjct: 95  CSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYAQSGECDKEAIELFCKMIS 154

Query: 195 GGVLPNEITFSSLLKACGNLANAKTGEQIYNHAVKLGFLSVNCVGNSLVSMYARSGRMED 16
           G + PN  +FSS+LKACGNL++  TGEQ+Y++AVKLG  SVNCVGNSL+SMYARSGRMED
Sbjct: 155 GHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMED 214

Query: 15  ARKAF 1
           ARKAF
Sbjct: 215 ARKAF 219



 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 40/108 (37%), Positives = 66/108 (61%), Gaps = 3/108 (2%)
 Frame = -1

Query: 315 EVFRRLSDHNCMSYTAMITAFVQSNGLDKEAIEMYRKMIEGGVLPNEITFSSLLKACGNL 136
           +VF ++ + N +++T MIT F Q  G  ++AI+++  M   G +P+  T+SS+L AC  L
Sbjct: 11  KVFDKMPERNLVTWTLMITRFAQL-GCARDAIDLFLDMELSGYVPDRFTYSSVLSACTEL 69

Query: 135 ANAKTGEQIYNHAVKLGFLSVNCVGNSLVSMYAR---SGRMEDARKAF 1
                G+Q+++  ++LG     CVG SLV MYA+    G ++D+RK F
Sbjct: 70  GLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVF 117



 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 41/122 (33%), Positives = 73/122 (59%)
 Frame = -1

Query: 366 SLLDMYAKSGGSIDDSSEVFRRLSDHNCMSYTAMITAFVQSNGLDKEAIEMYRKMIEGGV 187
           SL+ MYA+SG  ++D+ + F  L + N +SY A++  + + N   +EA  ++ ++ + G+
Sbjct: 201 SLISMYARSG-RMEDARKAFDILFEKNLVSYNAIVDGYAK-NLKSEEAFLLFNEIADTGI 258

Query: 186 LPNEITFSSLLKACGNLANAKTGEQIYNHAVKLGFLSVNCVGNSLVSMYARSGRMEDARK 7
             +  TF+SLL    ++     GEQI+   +K G+ S  C+ N+L+SMY+R G +E A +
Sbjct: 259 GISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQ 318

Query: 6   AF 1
            F
Sbjct: 319 VF 320



 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 34/92 (36%), Positives = 59/92 (64%)
 Frame = -1

Query: 366 SLLDMYAKSGGSIDDSSEVFRRLSDHNCMSYTAMITAFVQSNGLDKEAIEMYRKMIEGGV 187
           +L+ MY++ G +I+ + +VF  + D N +S+T+MIT F + +G    A+EM+ KM+E G 
Sbjct: 302 ALISMYSRCG-NIEAAFQVFNEMEDRNVISWTSMITGFAK-HGFATRALEMFHKMLETGT 359

Query: 186 LPNEITFSSLLKACGNLANAKTGEQIYNHAVK 91
            PNEIT+ ++L AC ++     G++ +N   K
Sbjct: 360 KPNEITYVAVLSACSHVGMISEGQKHFNSMYK 391