BLASTX nr result

ID: Bupleurum21_contig00006833 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00006833
         (902 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001234051.1| dehydroquinate dehydratase/shikimate:NADP ox...   384   e-104
gb|AAW65140.1| 3-dehydroquinate dehydratase/shikimate 5-dehydrog...   383   e-104
gb|ADA57640.1| dehydroquinate dehydratase [Solanum tuberosum]         381   e-103
ref|XP_002314474.1| dehydroquinate dehydratase/ shikimate dehydr...   377   e-102
ref|XP_002277395.2| PREDICTED: bifunctional 3-dehydroquinate deh...   375   e-102

>ref|NP_001234051.1| dehydroquinate dehydratase/shikimate:NADP oxidoreductase [Solanum
            lycopersicum] gi|3169883|gb|AAC17991.1| dehydroquinate
            dehydratase/shikimate:NADP oxidoreductase [Solanum
            lycopersicum] gi|3169888|gb|AAC17993.1| dehydroquinate
            dehydratase/shikimate:NADP oxidoreductase [Solanum
            lycopersicum]
          Length = 545

 Score =  384 bits (985), Expect = e-104
 Identities = 199/294 (67%), Positives = 223/294 (75%)
 Frame = +1

Query: 1    TKIFGIIGKPVGHSKSPILYNEAFRSAGFKGVYVHLLVDDLQKFLGSYSSTDFAGFSCTI 180
            TKIFGIIGKPV HSKSP+LYNE+FRS GF GV++HLLVDD+  F  +YSS DFAGFSCTI
Sbjct: 270  TKIFGIIGKPVSHSKSPLLYNESFRSVGFNGVFMHLLVDDIANFFRTYSSLDFAGFSCTI 329

Query: 181  PHKESAVKCCDEVDSIAKSIGAVNCIVRRNSGKLFGCNTDYVGAISAIEEGLRGSHLRDS 360
            PHKE+A+ CC E+D  AK+IGAVNCI+RR  GKLFGCNTDY+GAISAIEEGL+GS  + S
Sbjct: 330  PHKEAALDCCAEIDPTAKAIGAVNCIIRRPDGKLFGCNTDYIGAISAIEEGLQGS--QPS 387

Query: 361  AAESPLDGKLFVVIGAGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA 540
             + SPL GKLFVVIGAGGA                                        A
Sbjct: 388  ISGSPLAGKLFVVIGAGGA----------------GKAIAYGAKEKGARVVIANRTYERA 431

Query: 541  RELADTIGGHALSLSELNSFCPEDDMVLANTTSIGMQPKIDETPISKEALKSYKLVFDAV 720
            RELA  +G  ALSL EL++F PE+DM+LANTTSIGMQPK+D+TPISKEALK Y LVFDAV
Sbjct: 432  RELAIVVGAEALSLDELSNFHPENDMILANTTSIGMQPKVDDTPISKEALKHYSLVFDAV 491

Query: 721  YTPKITRLLREADECGAKIVTGVEMFIGQAYEQYERFTGLPVPKELFKHIMATY 882
            YTPKITRLLREA E GAKIVTGVEMFIGQAYEQYERFTGLP PKELFK+IM+TY
Sbjct: 492  YTPKITRLLREAQESGAKIVTGVEMFIGQAYEQYERFTGLPAPKELFKNIMSTY 545


>gb|AAW65140.1| 3-dehydroquinate dehydratase/shikimate 5-dehydrogenase [Juglans
            regia]
          Length = 508

 Score =  383 bits (983), Expect = e-104
 Identities = 199/293 (67%), Positives = 225/293 (76%), Gaps = 1/293 (0%)
 Frame = +1

Query: 1    TKIFGIIGKPVGHSKSPILYNEAFRSAGFKGVYVHLLVDDLQKFLGSYSSTDFAGFSCTI 180
            TK+FGIIGKPV HSKSPILYNEAF+S  F GVY+ LLVDD+  FL +YSSTDFAGFSCTI
Sbjct: 230  TKVFGIIGKPVHHSKSPILYNEAFKSVCFNGVYIPLLVDDIANFLQTYSSTDFAGFSCTI 289

Query: 181  PHKESAVKCCDEVDSIAKSIGAVNCIVRR-NSGKLFGCNTDYVGAISAIEEGLRGSHLRD 357
            PHKE+A+KCCDEVD +AKSIGAVNCI+RR   GKL G NTDYVGAISAIE+GLRGSH   
Sbjct: 290  PHKEAALKCCDEVDPVAKSIGAVNCIIRRPTDGKLVGYNTDYVGAISAIEDGLRGSHNSS 349

Query: 358  SAAESPLDGKLFVVIGAGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 537
            + A+SPL GKLFVVIGAGGA                                        
Sbjct: 350  NTADSPLAGKLFVVIGAGGA----------------GKALAYGAKEKGARVVIANRTYDR 393

Query: 538  ARELADTIGGHALSLSELNSFCPEDDMVLANTTSIGMQPKIDETPISKEALKSYKLVFDA 717
            ARELADTIGG ALSL++L++F PED M+LAN+TSIGMQPK+DETPI K AL+SY LVFDA
Sbjct: 394  ARELADTIGGDALSLADLDNFHPEDGMILANSTSIGMQPKVDETPIPKHALRSYSLVFDA 453

Query: 718  VYTPKITRLLREADECGAKIVTGVEMFIGQAYEQYERFTGLPVPKELFKHIMA 876
            VYTPK+TRLLREA+E GAKIVTG+EMFIGQAYEQ+ERFTGLP PKELF+ +MA
Sbjct: 454  VYTPKMTRLLREAEESGAKIVTGLEMFIGQAYEQFERFTGLPAPKELFRKVMA 506


>gb|ADA57640.1| dehydroquinate dehydratase [Solanum tuberosum]
          Length = 526

 Score =  381 bits (979), Expect = e-103
 Identities = 198/294 (67%), Positives = 222/294 (75%)
 Frame = +1

Query: 1    TKIFGIIGKPVGHSKSPILYNEAFRSAGFKGVYVHLLVDDLQKFLGSYSSTDFAGFSCTI 180
            TKIFGIIGKPV HSK P+LYNE+FRS GF GV++HLLVDD+  F  +YSS DFAGFSCTI
Sbjct: 251  TKIFGIIGKPVSHSKPPLLYNESFRSVGFNGVFMHLLVDDIANFFRTYSSLDFAGFSCTI 310

Query: 181  PHKESAVKCCDEVDSIAKSIGAVNCIVRRNSGKLFGCNTDYVGAISAIEEGLRGSHLRDS 360
            PHKE+A+ CC E+D  AK+IGAVNCI+RR  GKLFGCNTDY+GAISAIEEGL+GS  + S
Sbjct: 311  PHKEAALDCCAEIDPTAKAIGAVNCIIRRPDGKLFGCNTDYIGAISAIEEGLQGS--QPS 368

Query: 361  AAESPLDGKLFVVIGAGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA 540
             + SPL GKLFVVIGAGGA                                        A
Sbjct: 369  ISGSPLAGKLFVVIGAGGA----------------GKAIAYGAKEKGARVVIANRTYERA 412

Query: 541  RELADTIGGHALSLSELNSFCPEDDMVLANTTSIGMQPKIDETPISKEALKSYKLVFDAV 720
            RELA  +G  ALSL EL++F PE+DM+LANTTSIGMQPK+D+TPISKEALK Y LVFDAV
Sbjct: 413  RELAIVVGAEALSLDELSNFHPENDMILANTTSIGMQPKVDDTPISKEALKHYPLVFDAV 472

Query: 721  YTPKITRLLREADECGAKIVTGVEMFIGQAYEQYERFTGLPVPKELFKHIMATY 882
            YTPKITRLLREA E GAKIVTGVEMFIGQAYEQYERFTGLP PKELFK+IM+TY
Sbjct: 473  YTPKITRLLREAQESGAKIVTGVEMFIGQAYEQYERFTGLPAPKELFKNIMSTY 526


>ref|XP_002314474.1| dehydroquinate dehydratase/ shikimate dehydrogenase [Populus
            trichocarpa] gi|222863514|gb|EEF00645.1| dehydroquinate
            dehydratase/ shikimate dehydrogenase [Populus
            trichocarpa]
          Length = 538

 Score =  377 bits (969), Expect = e-102
 Identities = 196/295 (66%), Positives = 221/295 (74%), Gaps = 1/295 (0%)
 Frame = +1

Query: 1    TKIFGIIGKPVGHSKSPILYNEAFRSAGFKGVYVHLLVDDLQKFLGSYSSTDFAGFSCTI 180
            TK+FGIIGKPVGHSKSP+L+NEAF+S G  GVYVHLLVDD+ +FL +YSSTDFAGFSCTI
Sbjct: 260  TKVFGIIGKPVGHSKSPVLFNEAFKSVGINGVYVHLLVDDIARFLQTYSSTDFAGFSCTI 319

Query: 181  PHKESAVKCCDEVDSIAKSIGAVNCIVRR-NSGKLFGCNTDYVGAISAIEEGLRGSHLRD 357
            PHKE A KCCDEV  +AKSIGAVNCI+RR N GKLFG NTDYVGAISAIEEGLR S    
Sbjct: 320  PHKEDAAKCCDEVHPVAKSIGAVNCIIRRQNDGKLFGYNTDYVGAISAIEEGLRASQNVS 379

Query: 358  SAAESPLDGKLFVVIGAGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 537
            +   SPL GKLFVVIGAGGA                                        
Sbjct: 380  NTVGSPLAGKLFVVIGAGGA----------------GKALAYGAKEKGARVVIANRTYER 423

Query: 538  ARELADTIGGHALSLSELNSFCPEDDMVLANTTSIGMQPKIDETPISKEALKSYKLVFDA 717
            A+ LAD IGG A++L++L +F PED M+LANTTSIGMQPK+DETP+SK AL+SY LVFDA
Sbjct: 424  AKVLADIIGGDAITLADLENFHPEDGMILANTTSIGMQPKVDETPVSKNALRSYSLVFDA 483

Query: 718  VYTPKITRLLREADECGAKIVTGVEMFIGQAYEQYERFTGLPVPKELFKHIMATY 882
            VYTPKITRLLREA+E GAKIVTG+EMFIGQAYEQ+ERFT LP PKELF+ IM+ Y
Sbjct: 484  VYTPKITRLLREAEESGAKIVTGLEMFIGQAYEQFERFTELPAPKELFQKIMSKY 538


>ref|XP_002277395.2| PREDICTED: bifunctional 3-dehydroquinate dehydratase/shikimate
            dehydrogenase, chloroplastic-like [Vitis vinifera]
          Length = 522

 Score =  375 bits (963), Expect = e-102
 Identities = 195/293 (66%), Positives = 219/293 (74%), Gaps = 1/293 (0%)
 Frame = +1

Query: 1    TKIFGIIGKPVGHSKSPILYNEAFRSAGFKGVYVHLLVDDLQKFLGSYSSTDFAGFSCTI 180
            TK+FG+IGKPV HSKSP LYNEAF+S GF GVYVHLLVDD+ KF  +YS+ DFAGFSCTI
Sbjct: 243  TKVFGVIGKPVSHSKSPHLYNEAFKSVGFNGVYVHLLVDDIAKFFHTYSAADFAGFSCTI 302

Query: 181  PHKESAVKCCDEVDSIAKSIGAVNCIVRRNS-GKLFGCNTDYVGAISAIEEGLRGSHLRD 357
            PHKE+A+KCCDEV  +AKSIGAVNCI+RR S GKLFG NTDYVGAISAIE+GLR  H   
Sbjct: 303  PHKEAALKCCDEVSPVAKSIGAVNCIIRRPSDGKLFGYNTDYVGAISAIEDGLRDLHKIS 362

Query: 358  SAAESPLDGKLFVVIGAGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 537
            S + SPL GKLFVVIGAGGA                                        
Sbjct: 363  STSGSPLAGKLFVVIGAGGA----------------GKALAYGAKEKGARVVIANRTYAR 406

Query: 538  ARELADTIGGHALSLSELNSFCPEDDMVLANTTSIGMQPKIDETPISKEALKSYKLVFDA 717
            ARELAD +GG ALSL++LN+F PE+ M+LANTTSIGMQPK+DETPISK ALK Y LVFDA
Sbjct: 407  ARELADAVGGDALSLADLNNFHPENGMILANTTSIGMQPKVDETPISKHALKYYSLVFDA 466

Query: 718  VYTPKITRLLREADECGAKIVTGVEMFIGQAYEQYERFTGLPVPKELFKHIMA 876
            +YTPKITRLLREA E GA IVTG+EMFIGQAYEQ+ERFTGLP PKELFK  ++
Sbjct: 467  IYTPKITRLLREAQESGATIVTGLEMFIGQAYEQFERFTGLPAPKELFKQFIS 519


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