BLASTX nr result

ID: Bupleurum21_contig00006815 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00006815
         (477 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004151989.1| PREDICTED: H/ACA ribonucleoprotein complex s...   119   3e-25
dbj|BAD21599.1| nucleolar RNA-binding Nop10p-like protein [Oryza...   118   4e-25
ref|NP_001173081.1| Os02g0618250 [Oryza sativa Japonica Group] g...   118   4e-25
gb|AFK42858.1| unknown [Lotus japonicus]                              118   6e-25
ref|XP_003554292.1| PREDICTED: uncharacterized protein LOC100500...   117   7e-25

>ref|XP_004151989.1| PREDICTED: H/ACA ribonucleoprotein complex subunit 3-like
           protein-like [Cucumis sativus]
           gi|449514990|ref|XP_004164533.1| PREDICTED: H/ACA
           ribonucleoprotein complex subunit 3-like protein-like
           [Cucumis sativus]
          Length = 64

 Score =  119 bits (298), Expect = 3e-25
 Identities = 55/61 (90%), Positives = 59/61 (96%)
 Frame = +1

Query: 55  QFYINDKGDKVYTTKKETPLGLATESAHPARFSPDDKYSRQRVLLKKRFGLLPTQKPAPK 234
           QFYIN+ GDKVYTTKKE+PLGLAT+SAHPARFSPDDKYSRQRVLLKKRFGLLPTQ+P PK
Sbjct: 4   QFYINENGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQPPPK 63

Query: 235 Y 237
           Y
Sbjct: 64  Y 64


>dbj|BAD21599.1| nucleolar RNA-binding Nop10p-like protein [Oryza sativa Japonica
           Group] gi|47847676|dbj|BAD21457.1| nucleolar RNA-binding
           Nop10p-like protein [Oryza sativa Japonica Group]
          Length = 258

 Score =  118 bits (296), Expect = 4e-25
 Identities = 54/61 (88%), Positives = 59/61 (96%)
 Frame = +1

Query: 55  QFYINDKGDKVYTTKKETPLGLATESAHPARFSPDDKYSRQRVLLKKRFGLLPTQKPAPK 234
           Q+YIN+KGDKVYTTKKE+PLG+ T+SAHPARFSPDDKYSRQR LLKKRFGLLPTQKPAPK
Sbjct: 198 QYYINEKGDKVYTTKKESPLGVPTQSAHPARFSPDDKYSRQRYLLKKRFGLLPTQKPAPK 257

Query: 235 Y 237
           Y
Sbjct: 258 Y 258


>ref|NP_001173081.1| Os02g0618250 [Oryza sativa Japonica Group]
           gi|218191183|gb|EEC73610.1| hypothetical protein
           OsI_08093 [Oryza sativa Indica Group]
           gi|222623254|gb|EEE57386.1| hypothetical protein
           OsJ_07547 [Oryza sativa Japonica Group]
           gi|255671098|dbj|BAH91810.1| Os02g0618250 [Oryza sativa
           Japonica Group]
          Length = 64

 Score =  118 bits (296), Expect = 4e-25
 Identities = 54/61 (88%), Positives = 59/61 (96%)
 Frame = +1

Query: 55  QFYINDKGDKVYTTKKETPLGLATESAHPARFSPDDKYSRQRVLLKKRFGLLPTQKPAPK 234
           Q+YIN+KGDKVYTTKKE+PLG+ T+SAHPARFSPDDKYSRQR LLKKRFGLLPTQKPAPK
Sbjct: 4   QYYINEKGDKVYTTKKESPLGVPTQSAHPARFSPDDKYSRQRYLLKKRFGLLPTQKPAPK 63

Query: 235 Y 237
           Y
Sbjct: 64  Y 64


>gb|AFK42858.1| unknown [Lotus japonicus]
          Length = 64

 Score =  118 bits (295), Expect = 6e-25
 Identities = 55/61 (90%), Positives = 58/61 (95%)
 Frame = +1

Query: 55  QFYINDKGDKVYTTKKETPLGLATESAHPARFSPDDKYSRQRVLLKKRFGLLPTQKPAPK 234
           QFYIND GDKVYTTKKE+PLG AT+SAHPARFSPDDKYSRQRVLLKKRFGLLPTQ+P PK
Sbjct: 4   QFYINDNGDKVYTTKKESPLGNATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQPPPK 63

Query: 235 Y 237
           Y
Sbjct: 64  Y 64


>ref|XP_003554292.1| PREDICTED: uncharacterized protein LOC100500467 [Glycine max]
          Length = 64

 Score =  117 bits (294), Expect = 7e-25
 Identities = 54/61 (88%), Positives = 58/61 (95%)
 Frame = +1

Query: 55  QFYINDKGDKVYTTKKETPLGLATESAHPARFSPDDKYSRQRVLLKKRFGLLPTQKPAPK 234
           QFYIND GDKVYTTKK++PLGL T+SAHPARFSPDDKYSRQRVLLKKRFGLLPTQ+P PK
Sbjct: 4   QFYINDNGDKVYTTKKDSPLGLPTQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQPPPK 63

Query: 235 Y 237
           Y
Sbjct: 64  Y 64


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