BLASTX nr result

ID: Bupleurum21_contig00006804 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00006804
         (972 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517938.1| conserved hypothetical protein [Ricinus comm...   263   4e-68
ref|XP_002263228.1| PREDICTED: uncharacterized protein LOC100261...   261   2e-67
ref|XP_002329416.1| predicted protein [Populus trichocarpa] gi|2...   260   4e-67
ref|XP_002319358.1| predicted protein [Populus trichocarpa] gi|2...   254   2e-65
ref|XP_003539915.1| PREDICTED: uncharacterized protein LOC100806...   252   1e-64

>ref|XP_002517938.1| conserved hypothetical protein [Ricinus communis]
           gi|223542920|gb|EEF44456.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 221

 Score =  263 bits (673), Expect = 4e-68
 Identities = 124/216 (57%), Positives = 157/216 (72%), Gaps = 6/216 (2%)
 Frame = -3

Query: 832 MSRMARSCVQSILKMVNSLIGMVGLAMILYAFWMFRVWQRTV------DSSDFPPPWFIY 671
           M R+ RSC+QSILK++NS+IGMVGL MILYA W+ RVWQR +      D SD P PWFIY
Sbjct: 1   MVRLMRSCMQSILKLLNSVIGMVGLGMILYAVWLIRVWQREMGDFPFEDDSDNPAPWFIY 60

Query: 670 TFFGLGASLCVITCSGHIAAATANGCCXXXXXXXXXXXXXVEAAVTTDVFLNRNWEEDFP 491
           TF GLG +LCVITC GH+AA TANGCC             +EA V+ DVFLNR+WE+DFP
Sbjct: 61  TFLGLGVTLCVITCVGHVAAETANGCCLYLYMLFVFVLFMLEAGVSADVFLNRDWEKDFP 120

Query: 490 KDSTGKLDDLKGFIKDNFEMCKWIGLSIVATQGLCVLFAMILKAIGPHRETSYESDDDYT 311
           KD TG  +  K FI+ NFE+CKW+GLSIV+ QGL  L A+ILKA+GPH+    +SDD++T
Sbjct: 121 KDPTGSFNQFKDFIRSNFEICKWMGLSIVSVQGLSFLLALILKALGPHQYC--DSDDEFT 178

Query: 310 PEGVPLLKNYVHQPPYVTNAPLYGSRKDSWNIKVSK 203
           P+ VPLL N    PPYV  +P+ GSR D+W+I++++
Sbjct: 179 PDRVPLLNNAAIPPPYVVGSPVVGSRNDAWSIRINE 214


>ref|XP_002263228.1| PREDICTED: uncharacterized protein LOC100261981 [Vitis vinifera]
           gi|297739115|emb|CBI28766.3| unnamed protein product
           [Vitis vinifera]
          Length = 212

 Score =  261 bits (666), Expect = 2e-67
 Identities = 119/210 (56%), Positives = 150/210 (71%)
 Frame = -3

Query: 832 MSRMARSCVQSILKMVNSLIGMVGLAMILYAFWMFRVWQRTVDSSDFPPPWFIYTFFGLG 653
           M R+ RSC+QSILK+VNS+IGMVG+AM++YA WM RVW R +D  D   PWFIYTF GLG
Sbjct: 1   MGRIFRSCMQSILKLVNSIIGMVGIAMVMYALWMIRVWNRHMDDYDSRAPWFIYTFLGLG 60

Query: 652 ASLCVITCSGHIAAATANGCCXXXXXXXXXXXXXVEAAVTTDVFLNRNWEEDFPKDSTGK 473
           A+LC+ TC GH AA TANGCC             +EA VT DVFLN +WEEDFP+D TG 
Sbjct: 61  ATLCLFTCFGHAAAETANGCCLYVYMMYIFFLLILEAGVTADVFLNHDWEEDFPEDPTGS 120

Query: 472 LDDLKGFIKDNFEMCKWIGLSIVATQGLCVLFAMILKAIGPHRETSYESDDDYTPEGVPL 293
             + K F++ NFE+CKWIGLSI+  QGL +L AM+LKA+GPH+   Y+SDD+Y P   PL
Sbjct: 121 FHEFKNFVRSNFEICKWIGLSILFVQGLSILLAMVLKALGPHQ--YYDSDDEYAPTRAPL 178

Query: 292 LKNYVHQPPYVTNAPLYGSRKDSWNIKVSK 203
           L+N VH PPYV   P  GSR D++  ++++
Sbjct: 179 LRNAVHPPPYVAGDPFSGSRTDAYGKRINE 208


>ref|XP_002329416.1| predicted protein [Populus trichocarpa] gi|222870466|gb|EEF07597.1|
           predicted protein [Populus trichocarpa]
          Length = 212

 Score =  260 bits (664), Expect = 4e-67
 Identities = 125/212 (58%), Positives = 153/212 (72%), Gaps = 7/212 (3%)
 Frame = -3

Query: 817 RSCVQSILKMVNSLIGMVGLAMILYAFWMFRVWQRTV-------DSSDFPPPWFIYTFFG 659
           RSC+QSILK++N +IGMVG+AM+LYA W+ RVWQR +       D  DF P WFIYTF G
Sbjct: 3   RSCIQSILKLLNCVIGMVGIAMMLYAVWLIRVWQREIGDFPFFDDDDDFSP-WFIYTFLG 61

Query: 658 LGASLCVITCSGHIAAATANGCCXXXXXXXXXXXXXVEAAVTTDVFLNRNWEEDFPKDST 479
           LG +L +ITC GHIAA TANGCC             +EA VT DVFLNR+WEEDFPKD +
Sbjct: 62  LGVTLSMITCLGHIAAETANGCCLYLYMFFVFLLLMLEAGVTADVFLNRDWEEDFPKDPS 121

Query: 478 GKLDDLKGFIKDNFEMCKWIGLSIVATQGLCVLFAMILKAIGPHRETSYESDDDYTPEGV 299
           G  D  KGFI+ +FE+CKWIGLSIV+ QGL  L AMILKA+GPH    Y+SDDDY  + V
Sbjct: 122 GSFDQFKGFIRSSFELCKWIGLSIVSVQGLSFLVAMILKAVGPH--PCYDSDDDYASDRV 179

Query: 298 PLLKNYVHQPPYVTNAPLYGSRKDSWNIKVSK 203
           PLLK+ VH PPYV   P+ GSR D+W+I++++
Sbjct: 180 PLLKDVVHPPPYVVVNPVTGSRNDAWSIRINE 211


>ref|XP_002319358.1| predicted protein [Populus trichocarpa] gi|222857734|gb|EEE95281.1|
           predicted protein [Populus trichocarpa]
          Length = 221

 Score =  254 bits (650), Expect = 2e-65
 Identities = 124/217 (57%), Positives = 151/217 (69%), Gaps = 7/217 (3%)
 Frame = -3

Query: 832 MSRMARSCVQSILKMVNSLIGMVGLAMILYAFWMFRVWQRTV-------DSSDFPPPWFI 674
           M  + RSC+QSILK+VN LIGMVG+AM+LY+ W+ RVW+R +       D  DF P WFI
Sbjct: 1   MVSVMRSCIQSILKLVNCLIGMVGIAMVLYSIWLIRVWEREMGGFPFFEDDDDFTP-WFI 59

Query: 673 YTFFGLGASLCVITCSGHIAAATANGCCXXXXXXXXXXXXXVEAAVTTDVFLNRNWEEDF 494
           YTF GLG +L VITC GHIAA TANG C             +EA VT DV LNR+WEEDF
Sbjct: 60  YTFLGLGVALSVITCFGHIAAETANGYCLYLYMLFIFLLLMLEAGVTADVVLNRDWEEDF 119

Query: 493 PKDSTGKLDDLKGFIKDNFEMCKWIGLSIVATQGLCVLFAMILKAIGPHRETSYESDDDY 314
           PKD +G  D  KGF++ NFE+CKWIGLSIV  QGL  L AMILKAIGPH   SY+SDDDY
Sbjct: 120 PKDPSGSFDQFKGFVRSNFELCKWIGLSIVFVQGLSFLVAMILKAIGPH--PSYDSDDDY 177

Query: 313 TPEGVPLLKNYVHQPPYVTNAPLYGSRKDSWNIKVSK 203
             +  PLLK+ VH PPY    P+ GSR ++W+I++++
Sbjct: 178 ASDRAPLLKDVVHPPPYAVGNPVMGSRNNAWSIRITE 214


>ref|XP_003539915.1| PREDICTED: uncharacterized protein LOC100806660 isoform 1 [Glycine
           max]
          Length = 210

 Score =  252 bits (643), Expect = 1e-64
 Identities = 120/210 (57%), Positives = 148/210 (70%), Gaps = 6/210 (2%)
 Frame = -3

Query: 832 MSRMARSCVQSILKMVNSLIGMVGLAMILYAFWMFRVWQRTVDS------SDFPPPWFIY 671
           M R+ RSC+QS LK+VNS+IGM GLAMILY+ WM RVWQR +        SD+PPPWFIY
Sbjct: 1   MVRVLRSCIQSTLKLVNSVIGMAGLAMILYSAWMIRVWQRKMGELPFGHDSDYPPPWFIY 60

Query: 670 TFFGLGASLCVITCSGHIAAATANGCCXXXXXXXXXXXXXVEAAVTTDVFLNRNWEEDFP 491
           TF GLG + CVITC GH+AA TANGCC             +EAAVT DVF+N++WE+DFP
Sbjct: 61  TFLGLGVAFCVITCLGHVAAETANGCCLYLYIVFVVLLIMLEAAVTVDVFVNQDWEKDFP 120

Query: 490 KDSTGKLDDLKGFIKDNFEMCKWIGLSIVATQGLCVLFAMILKAIGPHRETSYESDDDYT 311
           KD +G  D  K FI+ N+EMCKW+GLS+V+ QGL +L AMILKA+GPH+   Y+SDD+Y 
Sbjct: 121 KDPSGSFDQFKNFIRSNYEMCKWVGLSLVSVQGLSLLLAMILKALGPHQ--YYDSDDEYA 178

Query: 310 PEGVPLLKNYVHQPPYVTNAPLYGSRKDSW 221
           P+ VPLLKN    PP+    P Y    D+W
Sbjct: 179 PDRVPLLKN---APPHYVVDPGYAHGNDTW 205


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