BLASTX nr result

ID: Bupleurum21_contig00006803 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00006803
         (478 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK94910.1| unknown [Populus trichocarpa]                          103   3e-22
ref|XP_002301781.1| predicted protein [Populus trichocarpa] gi|2...   103   3e-22
ref|XP_002303829.1| predicted protein [Populus trichocarpa] gi|2...   104   6e-21
emb|CBI37313.3| unnamed protein product [Vitis vinifera]              102   4e-20
ref|XP_002266086.1| PREDICTED: E3 ubiquitin-protein ligase PRT1-...   102   4e-20

>gb|ABK94910.1| unknown [Populus trichocarpa]
          Length = 469

 Score =  103 bits (256), Expect(2) = 3e-22
 Identities = 38/68 (55%), Positives = 54/68 (79%)
 Frame = +3

Query: 192 DVVYKPVVLGCGHMACFWCVYKSMGEITTSSCPVCRHTYDHFPRICKMLHYVILDLYPAV 371
           D++YKP+VL CGH++CFWCV+KSM  +  S+CP+CRH Y+HFP IC+MLH+++  LYP V
Sbjct: 44  DLLYKPIVLSCGHISCFWCVHKSMSGLRESNCPICRHPYNHFPTICQMLHFLLFKLYPMV 103

Query: 372 YKTKKRIT 395
           Y  ++  T
Sbjct: 104 YTRREEQT 111



 Score = 26.6 bits (57), Expect(2) = 3e-22
 Identities = 12/22 (54%), Positives = 13/22 (59%)
 Frame = +1

Query: 382 RRESQVKEEEEQRGKFSPHIWY 447
           RRE Q  EEE + G FSP   Y
Sbjct: 106 RREEQTLEEEMEMGFFSPQFGY 127



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 23/45 (51%), Positives = 28/45 (62%)
 Frame = -1

Query: 136 PVTGNRYQCIDCNGTSGFDLCEQCYENSLNLAGRFDQQHNSKHNF 2
           P+ G+RY+C DC    GFDLC  CY       GRF+QQH S+H F
Sbjct: 348 PIVGDRYKCKDCVEEIGFDLCGDCYNTCSKRPGRFNQQHTSEHKF 392


>ref|XP_002301781.1| predicted protein [Populus trichocarpa] gi|222843507|gb|EEE81054.1|
           predicted protein [Populus trichocarpa]
          Length = 382

 Score =  103 bits (256), Expect(2) = 3e-22
 Identities = 38/68 (55%), Positives = 54/68 (79%)
 Frame = +3

Query: 192 DVVYKPVVLGCGHMACFWCVYKSMGEITTSSCPVCRHTYDHFPRICKMLHYVILDLYPAV 371
           D++YKP+VL CGH++CFWCV+KSM  +  S+CP+CRH Y+HFP IC+MLH+++  LYP V
Sbjct: 31  DLLYKPIVLSCGHISCFWCVHKSMSGLRESNCPICRHPYNHFPTICQMLHFLLFKLYPMV 90

Query: 372 YKTKKRIT 395
           Y  ++  T
Sbjct: 91  YTRREEQT 98



 Score = 26.6 bits (57), Expect(2) = 3e-22
 Identities = 12/22 (54%), Positives = 13/22 (59%)
 Frame = +1

Query: 382 RRESQVKEEEEQRGKFSPHIWY 447
           RRE Q  EEE + G FSP   Y
Sbjct: 93  RREEQTLEEEMEMGFFSPQFGY 114



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 23/45 (51%), Positives = 28/45 (62%)
 Frame = -1

Query: 136 PVTGNRYQCIDCNGTSGFDLCEQCYENSLNLAGRFDQQHNSKHNF 2
           P+ G+RY+C DC    GFDLC  CY       GRF+QQH S+H F
Sbjct: 333 PIVGDRYKCKDCVEEIGFDLCGDCYNTCSKRPGRFNQQHTSEHKF 377


>ref|XP_002303829.1| predicted protein [Populus trichocarpa] gi|222841261|gb|EEE78808.1|
           predicted protein [Populus trichocarpa]
          Length = 469

 Score =  104 bits (260), Expect = 6e-21
 Identities = 38/93 (40%), Positives = 65/93 (69%)
 Frame = +3

Query: 192 DVVYKPVVLGCGHMACFWCVYKSMGEITTSSCPVCRHTYDHFPRICKMLHYVILDLYPAV 371
           D++YKPVVLGCGH++CFWCV+ SM  +  S CP+CRH ++HFP +C++LH++++ +YP  
Sbjct: 58  DLLYKPVVLGCGHLSCFWCVFYSMNGLRESHCPICRHQFNHFPSVCQLLHFLLMKMYPIA 117

Query: 372 YKTKKRITSQRRRRTKGQVLPSYLVYSLWEEAG 470
           YK ++R   +  ++  G+  P ++ +     +G
Sbjct: 118 YKRREREVGEEEKK-GGRFSPQFVHHPFGSHSG 149



 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 25/47 (53%), Positives = 34/47 (72%)
 Frame = -1

Query: 142 MLPVTGNRYQCIDCNGTSGFDLCEQCYENSLNLAGRFDQQHNSKHNF 2
           M+P+ G RY+C DC+   GFD+CE CY N   ++GRF+QQH  +HNF
Sbjct: 347 MIPIIGERYKCKDCSEEIGFDMCESCYNNPSEVSGRFNQQHKPEHNF 393


>emb|CBI37313.3| unnamed protein product [Vitis vinifera]
          Length = 451

 Score =  102 bits (253), Expect = 4e-20
 Identities = 38/76 (50%), Positives = 56/76 (73%)
 Frame = +3

Query: 192 DVVYKPVVLGCGHMACFWCVYKSMGEITTSSCPVCRHTYDHFPRICKMLHYVILDLYPAV 371
           D++YKP+VL CGH++CFWCV+ SM     S CP+CR+ Y HFP IC+MLH+++L +YP  
Sbjct: 10  DLLYKPIVLACGHISCFWCVHYSMDGAHESHCPICRNPYSHFPTICQMLHFMLLKMYPVA 69

Query: 372 YKTKKRITSQRRRRTK 419
           YK +++ T +R   T+
Sbjct: 70  YKRREKQTLEREEETR 85



 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 24/47 (51%), Positives = 30/47 (63%)
 Frame = -1

Query: 142 MLPVTGNRYQCIDCNGTSGFDLCEQCYENSLNLAGRFDQQHNSKHNF 2
           M P+ G+RY+C DC    GFDLC  CY  +  L GRF+QQH  +H F
Sbjct: 320 MYPIVGDRYRCKDCKEKIGFDLCGDCYNTNSKLPGRFNQQHTPEHKF 366


>ref|XP_002266086.1| PREDICTED: E3 ubiquitin-protein ligase PRT1-like [Vitis vinifera]
          Length = 470

 Score =  102 bits (253), Expect = 4e-20
 Identities = 38/76 (50%), Positives = 56/76 (73%)
 Frame = +3

Query: 192 DVVYKPVVLGCGHMACFWCVYKSMGEITTSSCPVCRHTYDHFPRICKMLHYVILDLYPAV 371
           D++YKP+VL CGH++CFWCV+ SM     S CP+CR+ Y HFP IC+MLH+++L +YP  
Sbjct: 29  DLLYKPIVLACGHISCFWCVHYSMDGAHESHCPICRNPYSHFPTICQMLHFMLLKMYPVA 88

Query: 372 YKTKKRITSQRRRRTK 419
           YK +++ T +R   T+
Sbjct: 89  YKRREKQTLEREEETR 104



 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 24/47 (51%), Positives = 30/47 (63%)
 Frame = -1

Query: 142 MLPVTGNRYQCIDCNGTSGFDLCEQCYENSLNLAGRFDQQHNSKHNF 2
           M P+ G+RY+C DC    GFDLC  CY  +  L GRF+QQH  +H F
Sbjct: 339 MYPIVGDRYRCKDCKEKIGFDLCGDCYNTNSKLPGRFNQQHTPEHKF 385


Top