BLASTX nr result
ID: Bupleurum21_contig00006803
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Bupleurum21_contig00006803 (478 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ABK94910.1| unknown [Populus trichocarpa] 103 3e-22 ref|XP_002301781.1| predicted protein [Populus trichocarpa] gi|2... 103 3e-22 ref|XP_002303829.1| predicted protein [Populus trichocarpa] gi|2... 104 6e-21 emb|CBI37313.3| unnamed protein product [Vitis vinifera] 102 4e-20 ref|XP_002266086.1| PREDICTED: E3 ubiquitin-protein ligase PRT1-... 102 4e-20 >gb|ABK94910.1| unknown [Populus trichocarpa] Length = 469 Score = 103 bits (256), Expect(2) = 3e-22 Identities = 38/68 (55%), Positives = 54/68 (79%) Frame = +3 Query: 192 DVVYKPVVLGCGHMACFWCVYKSMGEITTSSCPVCRHTYDHFPRICKMLHYVILDLYPAV 371 D++YKP+VL CGH++CFWCV+KSM + S+CP+CRH Y+HFP IC+MLH+++ LYP V Sbjct: 44 DLLYKPIVLSCGHISCFWCVHKSMSGLRESNCPICRHPYNHFPTICQMLHFLLFKLYPMV 103 Query: 372 YKTKKRIT 395 Y ++ T Sbjct: 104 YTRREEQT 111 Score = 26.6 bits (57), Expect(2) = 3e-22 Identities = 12/22 (54%), Positives = 13/22 (59%) Frame = +1 Query: 382 RRESQVKEEEEQRGKFSPHIWY 447 RRE Q EEE + G FSP Y Sbjct: 106 RREEQTLEEEMEMGFFSPQFGY 127 Score = 57.4 bits (137), Expect = 1e-06 Identities = 23/45 (51%), Positives = 28/45 (62%) Frame = -1 Query: 136 PVTGNRYQCIDCNGTSGFDLCEQCYENSLNLAGRFDQQHNSKHNF 2 P+ G+RY+C DC GFDLC CY GRF+QQH S+H F Sbjct: 348 PIVGDRYKCKDCVEEIGFDLCGDCYNTCSKRPGRFNQQHTSEHKF 392 >ref|XP_002301781.1| predicted protein [Populus trichocarpa] gi|222843507|gb|EEE81054.1| predicted protein [Populus trichocarpa] Length = 382 Score = 103 bits (256), Expect(2) = 3e-22 Identities = 38/68 (55%), Positives = 54/68 (79%) Frame = +3 Query: 192 DVVYKPVVLGCGHMACFWCVYKSMGEITTSSCPVCRHTYDHFPRICKMLHYVILDLYPAV 371 D++YKP+VL CGH++CFWCV+KSM + S+CP+CRH Y+HFP IC+MLH+++ LYP V Sbjct: 31 DLLYKPIVLSCGHISCFWCVHKSMSGLRESNCPICRHPYNHFPTICQMLHFLLFKLYPMV 90 Query: 372 YKTKKRIT 395 Y ++ T Sbjct: 91 YTRREEQT 98 Score = 26.6 bits (57), Expect(2) = 3e-22 Identities = 12/22 (54%), Positives = 13/22 (59%) Frame = +1 Query: 382 RRESQVKEEEEQRGKFSPHIWY 447 RRE Q EEE + G FSP Y Sbjct: 93 RREEQTLEEEMEMGFFSPQFGY 114 Score = 57.4 bits (137), Expect = 1e-06 Identities = 23/45 (51%), Positives = 28/45 (62%) Frame = -1 Query: 136 PVTGNRYQCIDCNGTSGFDLCEQCYENSLNLAGRFDQQHNSKHNF 2 P+ G+RY+C DC GFDLC CY GRF+QQH S+H F Sbjct: 333 PIVGDRYKCKDCVEEIGFDLCGDCYNTCSKRPGRFNQQHTSEHKF 377 >ref|XP_002303829.1| predicted protein [Populus trichocarpa] gi|222841261|gb|EEE78808.1| predicted protein [Populus trichocarpa] Length = 469 Score = 104 bits (260), Expect = 6e-21 Identities = 38/93 (40%), Positives = 65/93 (69%) Frame = +3 Query: 192 DVVYKPVVLGCGHMACFWCVYKSMGEITTSSCPVCRHTYDHFPRICKMLHYVILDLYPAV 371 D++YKPVVLGCGH++CFWCV+ SM + S CP+CRH ++HFP +C++LH++++ +YP Sbjct: 58 DLLYKPVVLGCGHLSCFWCVFYSMNGLRESHCPICRHQFNHFPSVCQLLHFLLMKMYPIA 117 Query: 372 YKTKKRITSQRRRRTKGQVLPSYLVYSLWEEAG 470 YK ++R + ++ G+ P ++ + +G Sbjct: 118 YKRREREVGEEEKK-GGRFSPQFVHHPFGSHSG 149 Score = 67.4 bits (163), Expect = 1e-09 Identities = 25/47 (53%), Positives = 34/47 (72%) Frame = -1 Query: 142 MLPVTGNRYQCIDCNGTSGFDLCEQCYENSLNLAGRFDQQHNSKHNF 2 M+P+ G RY+C DC+ GFD+CE CY N ++GRF+QQH +HNF Sbjct: 347 MIPIIGERYKCKDCSEEIGFDMCESCYNNPSEVSGRFNQQHKPEHNF 393 >emb|CBI37313.3| unnamed protein product [Vitis vinifera] Length = 451 Score = 102 bits (253), Expect = 4e-20 Identities = 38/76 (50%), Positives = 56/76 (73%) Frame = +3 Query: 192 DVVYKPVVLGCGHMACFWCVYKSMGEITTSSCPVCRHTYDHFPRICKMLHYVILDLYPAV 371 D++YKP+VL CGH++CFWCV+ SM S CP+CR+ Y HFP IC+MLH+++L +YP Sbjct: 10 DLLYKPIVLACGHISCFWCVHYSMDGAHESHCPICRNPYSHFPTICQMLHFMLLKMYPVA 69 Query: 372 YKTKKRITSQRRRRTK 419 YK +++ T +R T+ Sbjct: 70 YKRREKQTLEREEETR 85 Score = 61.2 bits (147), Expect = 8e-08 Identities = 24/47 (51%), Positives = 30/47 (63%) Frame = -1 Query: 142 MLPVTGNRYQCIDCNGTSGFDLCEQCYENSLNLAGRFDQQHNSKHNF 2 M P+ G+RY+C DC GFDLC CY + L GRF+QQH +H F Sbjct: 320 MYPIVGDRYRCKDCKEKIGFDLCGDCYNTNSKLPGRFNQQHTPEHKF 366 >ref|XP_002266086.1| PREDICTED: E3 ubiquitin-protein ligase PRT1-like [Vitis vinifera] Length = 470 Score = 102 bits (253), Expect = 4e-20 Identities = 38/76 (50%), Positives = 56/76 (73%) Frame = +3 Query: 192 DVVYKPVVLGCGHMACFWCVYKSMGEITTSSCPVCRHTYDHFPRICKMLHYVILDLYPAV 371 D++YKP+VL CGH++CFWCV+ SM S CP+CR+ Y HFP IC+MLH+++L +YP Sbjct: 29 DLLYKPIVLACGHISCFWCVHYSMDGAHESHCPICRNPYSHFPTICQMLHFMLLKMYPVA 88 Query: 372 YKTKKRITSQRRRRTK 419 YK +++ T +R T+ Sbjct: 89 YKRREKQTLEREEETR 104 Score = 61.2 bits (147), Expect = 8e-08 Identities = 24/47 (51%), Positives = 30/47 (63%) Frame = -1 Query: 142 MLPVTGNRYQCIDCNGTSGFDLCEQCYENSLNLAGRFDQQHNSKHNF 2 M P+ G+RY+C DC GFDLC CY + L GRF+QQH +H F Sbjct: 339 MYPIVGDRYRCKDCKEKIGFDLCGDCYNTNSKLPGRFNQQHTPEHKF 385