BLASTX nr result

ID: Bupleurum21_contig00006788 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00006788
         (317 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN76469.1| hypothetical protein VITISV_030043 [Vitis vinifera]    73   2e-11
ref|XP_002268768.2| PREDICTED: syntaxin-31-like [Vitis vinifera]       70   1e-10
emb|CBI25507.3| unnamed protein product [Vitis vinifera]               70   1e-10
ref|XP_003617622.1| Syntaxin-31 [Medicago truncatula] gi|3555189...    63   3e-08
ref|XP_002873223.1| T-snare sed 5 [Arabidopsis lyrata subsp. lyr...    61   8e-08

>emb|CAN76469.1| hypothetical protein VITISV_030043 [Vitis vinifera]
          Length = 872

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 41/77 (53%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
 Frame = +1

Query: 61  MVATGVTSCRDRTSEFGSLLETLKKIGGIS-ATHIXXXXXXXXXXXXXXXRSEFNKQASR 237
           M ++GV+S RDRTSEF SL E +KKIGG++ A H                RSEFNK+ASR
Sbjct: 55  MTSSGVSSYRDRTSEFRSLSERMKKIGGMAVANHAEDDPATSRSLASASSRSEFNKKASR 114

Query: 238 IGFGIHDTSLKIGRLEK 288
           IG GIH+  LKI RL K
Sbjct: 115 IGLGIHEACLKISRLAK 131


>ref|XP_002268768.2| PREDICTED: syntaxin-31-like [Vitis vinifera]
          Length = 341

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 40/77 (51%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
 Frame = +1

Query: 61  MVATGVTSCRDRTSEFGSLLETLKKIGGIS-ATHIXXXXXXXXXXXXXXXRSEFNKQASR 237
           M ++GV+S RDRTSEF SL   +KKIGG++ A H                RSEFNK+ASR
Sbjct: 1   MTSSGVSSYRDRTSEFRSLSGRMKKIGGMAVANHAEDDPATSRSLASASSRSEFNKKASR 60

Query: 238 IGFGIHDTSLKIGRLEK 288
           IG GIH+  LKI RL K
Sbjct: 61  IGLGIHEACLKISRLAK 77


>emb|CBI25507.3| unnamed protein product [Vitis vinifera]
          Length = 395

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 40/77 (51%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
 Frame = +1

Query: 61  MVATGVTSCRDRTSEFGSLLETLKKIGGIS-ATHIXXXXXXXXXXXXXXXRSEFNKQASR 237
           M ++GV+S RDRTSEF SL   +KKIGG++ A H                RSEFNK+ASR
Sbjct: 55  MTSSGVSSYRDRTSEFRSLSGRMKKIGGMAVANHAEDDPATSRSLASASSRSEFNKKASR 114

Query: 238 IGFGIHDTSLKIGRLEK 288
           IG GIH+  LKI RL K
Sbjct: 115 IGLGIHEACLKISRLAK 131


>ref|XP_003617622.1| Syntaxin-31 [Medicago truncatula] gi|355518957|gb|AET00581.1|
           Syntaxin-31 [Medicago truncatula]
          Length = 334

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 35/67 (52%), Positives = 40/67 (59%)
 Frame = +1

Query: 88  RDRTSEFGSLLETLKKIGGISATHIXXXXXXXXXXXXXXXRSEFNKQASRIGFGIHDTSL 267
           RDRTSEF SL ETLKKIGG                     RS+FN++AS+IG GIH+TS 
Sbjct: 6   RDRTSEFRSLTETLKKIGGGGGGATAPPNQQPSTSQISYSRSDFNRKASQIGLGIHETSQ 65

Query: 268 KIGRLEK 288
           KI RL K
Sbjct: 66  KIARLAK 72


>ref|XP_002873223.1| T-snare sed 5 [Arabidopsis lyrata subsp. lyrata]
           gi|297319060|gb|EFH49482.1| T-snare sed 5 [Arabidopsis
           lyrata subsp. lyrata]
          Length = 336

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 36/67 (53%), Positives = 40/67 (59%)
 Frame = +1

Query: 88  RDRTSEFGSLLETLKKIGGISATHIXXXXXXXXXXXXXXXRSEFNKQASRIGFGIHDTSL 267
           RDRT EF SL +TLKKIG I + H                 SEFNK+ASRIG GIH+TS 
Sbjct: 6   RDRTVEFHSLSQTLKKIGAIPSVH--QDEDDPASSKRSSPGSEFNKKASRIGLGIHETSQ 63

Query: 268 KIGRLEK 288
           KI RL K
Sbjct: 64  KIARLAK 70


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