BLASTX nr result

ID: Bupleurum21_contig00006779 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00006779
         (927 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272142.1| PREDICTED: uncharacterized protein LOC100265...   179   7e-57
ref|XP_002511843.1| DNA binding protein, putative [Ricinus commu...   179   8e-56
ref|XP_002320785.1| predicted protein [Populus trichocarpa] gi|2...   183   2e-55
gb|ABO42262.1| AT-hook DNA-binding protein [Gossypium hirsutum]       174   4e-53
ref|XP_003521051.1| PREDICTED: uncharacterized protein LOC100783...   157   1e-49

>ref|XP_002272142.1| PREDICTED: uncharacterized protein LOC100265498 [Vitis vinifera]
           gi|297745264|emb|CBI40344.3| unnamed protein product
           [Vitis vinifera]
          Length = 345

 Score =  179 bits (453), Expect(2) = 7e-57
 Identities = 110/220 (50%), Positives = 123/220 (55%), Gaps = 7/220 (3%)
 Frame = +1

Query: 4   MDPRNAMALSGSPSYYIQRELAGSVSXXXXXXXXXXX----FLINPDDHYQTNIGSS-ST 168
           MD R+AMA+ GS SYY+QR +AGS S                L NP   +Q NIG   S 
Sbjct: 1   MDRRDAMAMPGSGSYYMQRGMAGSGSGSGPQPGLHGSPGIRSLSNPSMPFQPNIGGGGSM 60

Query: 169 GGTIQADPSFANSPHGINVGVPAPVXXXXXXXXXXXXXX-KYGPDXXXXXXXXXXXXXXX 345
           G T+  +PS   S HG+NVG P+ +               KYGPD               
Sbjct: 61  GSTLPVEPSSVISTHGVNVGAPSTLLPPSEPVKRKRGRPRKYGPDGTVSLALSPSSATSP 120

Query: 346 XXXXXX-QKXXXXXXXXXXXKQQLAPLGEWLSGSAGMGFTPHVITIAAGEDITGKIMSVL 522
                  QK           KQQLA LGEWLSGSAGMGFTPHVIT+A GED+  KIMS  
Sbjct: 121 GTLTASTQKRGRGRPPGTGRKQQLASLGEWLSGSAGMGFTPHVITVAVGEDVATKIMSFS 180

Query: 523 QQESRATCILSANGVISTVTLRQPSTSGGTVTYEGRFEIL 642
           QQ  RA CILSANG +STVTLRQPSTSGGTVTYEGRFEIL
Sbjct: 181 QQGPRAICILSANGAVSTVTLRQPSTSGGTVTYEGRFEIL 220



 Score = 68.9 bits (167), Expect(2) = 7e-57
 Identities = 40/77 (51%), Positives = 47/77 (61%), Gaps = 5/77 (6%)
 Frame = +2

Query: 710 LSGSYLQIDSGGSRGQTGDLSISLVSSDXXXXXXXXXXXLIAASPVQVIVGSFMCGSHKM 889
           LSGSYL  D+GGSR +TG LS+SL S D           L AASPVQVIVGSF+ G+ K 
Sbjct: 222 LSGSYLLTDNGGSRNRTGGLSVSLASPDGRVIGGGVGGMLTAASPVQVIVGSFIWGNSKT 281

Query: 890 K-----SITNTGSSDRQ 925
           K     S+   G S+RQ
Sbjct: 282 KNKMGESVEGAGDSERQ 298


>ref|XP_002511843.1| DNA binding protein, putative [Ricinus communis]
           gi|223549023|gb|EEF50512.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 340

 Score =  179 bits (455), Expect(2) = 8e-56
 Identities = 106/219 (48%), Positives = 126/219 (57%), Gaps = 6/219 (2%)
 Frame = +1

Query: 4   MDPRNAMALSGSPSYYIQRELAGSVSXXXXXXXXXXXF--LINPDDHYQTNIGSSSTGGT 177
           MD R+AMA+SGS S+Y+QR + GS S              L + +  +Q+N+G+++ G T
Sbjct: 1   MDRRDAMAMSGSASFYMQRGMTGSGSGTQSGLNVSSGINPLTSTNVSFQSNVGANTIGST 60

Query: 178 IQADPSFANSPHGINVG----VPAPVXXXXXXXXXXXXXXKYGPDXXXXXXXXXXXXXXX 345
           +  + S A  PHG+NVG    +P P               KYGPD               
Sbjct: 61  LPLETSTAIPPHGVNVGASSLMPPP---GEPVKRKRGRPRKYGPDGTVSLALSPSLSTHP 117

Query: 346 XXXXXXQKXXXXXXXXXXXKQQLAPLGEWLSGSAGMGFTPHVITIAAGEDITGKIMSVLQ 525
                 QK           KQQLA LGEWLSGSAGMGFTPH+ITIA GEDI  KIMS  Q
Sbjct: 118 GTITPTQKRGRGRPPGTGRKQQLASLGEWLSGSAGMGFTPHIITIAVGEDIATKIMSFSQ 177

Query: 526 QESRATCILSANGVISTVTLRQPSTSGGTVTYEGRFEIL 642
           Q  RA CILSANG +STVTLRQPSTSGG+VTYEGRFEIL
Sbjct: 178 QGPRAICILSANGAVSTVTLRQPSTSGGSVTYEGRFEIL 216



 Score = 64.7 bits (156), Expect(2) = 8e-56
 Identities = 36/67 (53%), Positives = 41/67 (61%)
 Frame = +2

Query: 710 LSGSYLQIDSGGSRGQTGDLSISLVSSDXXXXXXXXXXXLIAASPVQVIVGSFMCGSHKM 889
           LSGSYL   +GGSR +TG LS+SL S D           LIAASPVQVIVGSF+ G  K 
Sbjct: 218 LSGSYLVTSNGGSRNRTGGLSVSLASPDGRVIGGGVGGMLIAASPVQVIVGSFLWGGSKA 277

Query: 890 KSITNTG 910
           K+    G
Sbjct: 278 KNKKGEG 284


>ref|XP_002320785.1| predicted protein [Populus trichocarpa] gi|222861558|gb|EEE99100.1|
           predicted protein [Populus trichocarpa]
          Length = 336

 Score =  183 bits (465), Expect(2) = 2e-55
 Identities = 107/214 (50%), Positives = 124/214 (57%), Gaps = 1/214 (0%)
 Frame = +1

Query: 4   MDPRNAMALSGSPSYYIQRELAGSVSXXXXXXXXXXXFLINPDDHYQTNIGSSSTGGTIQ 183
           MD R+AMA+SGS S+Y+ R +  S S            L N +  +Q NIG+++ G T+ 
Sbjct: 1   MDRRDAMAISGSASFYMHRGITSSGSMNVSSNINT---LSNTNVAFQPNIGANTMGSTLP 57

Query: 184 ADPSFANSPHGINVGVPAPVXXXXXXXXXXXXXX-KYGPDXXXXXXXXXXXXXXXXXXXX 360
            +   A SPHG+NVGVP+ +               KYGPD                    
Sbjct: 58  MEHPVAISPHGVNVGVPSTMPPSGEPVKRKRGRPRKYGPDGAVSLALSSSLSTHPGTITP 117

Query: 361 XQKXXXXXXXXXXXKQQLAPLGEWLSGSAGMGFTPHVITIAAGEDITGKIMSVLQQESRA 540
            QK           KQQLA LGEWLSGSAGMGFTPH+ITIA GEDI  KIMS  QQ  RA
Sbjct: 118 SQKRGRGRPPGTGRKQQLASLGEWLSGSAGMGFTPHIITIAVGEDIATKIMSFSQQGPRA 177

Query: 541 TCILSANGVISTVTLRQPSTSGGTVTYEGRFEIL 642
            CILSANG +STVTLRQPSTSGGTVTYEGRFEIL
Sbjct: 178 VCILSANGAVSTVTLRQPSTSGGTVTYEGRFEIL 211



 Score = 59.3 bits (142), Expect(2) = 2e-55
 Identities = 32/56 (57%), Positives = 37/56 (66%)
 Frame = +2

Query: 710 LSGSYLQIDSGGSRGQTGDLSISLVSSDXXXXXXXXXXXLIAASPVQVIVGSFMCG 877
           LSGSYL  + GGSR ++G LS+SL S D           LIAASPVQVIVGSF+ G
Sbjct: 213 LSGSYLLTNDGGSRNRSGGLSVSLASPDGRVIGGGVGGVLIAASPVQVIVGSFLWG 268


>gb|ABO42262.1| AT-hook DNA-binding protein [Gossypium hirsutum]
          Length = 340

 Score =  174 bits (442), Expect(2) = 4e-53
 Identities = 103/216 (47%), Positives = 122/216 (56%), Gaps = 3/216 (1%)
 Frame = +1

Query: 4   MDPRNAMALSGSPSYYIQ-RELAGSVSXXXXXXXXXXXF--LINPDDHYQTNIGSSSTGG 174
           MD R+AMALSGS SYY+Q R + GS S              L +P+  YQ++I +++ G 
Sbjct: 1   MDRRDAMALSGSASYYMQQRGITGSGSGTQSGVHGSPGIHPLSSPNVQYQSSISATTMGA 60

Query: 175 TIQADPSFANSPHGINVGVPAPVXXXXXXXXXXXXXXKYGPDXXXXXXXXXXXXXXXXXX 354
           T+  +P    +PH +NVG P  V              KYGPD                  
Sbjct: 61  TLPVEPLSGITPHNVNVGTPPAVQPGETVKRKRGRPRKYGPDGTVSLALTPASATHPGTI 120

Query: 355 XXXQKXXXXXXXXXXXKQQLAPLGEWLSGSAGMGFTPHVITIAAGEDITGKIMSVLQQES 534
              QK           KQQL+ LGE LSGSAGMGFTPHVITIA GEDI  K+MS  QQ  
Sbjct: 121 TPIQKRGRGRPPGTGRKQQLSSLGELLSGSAGMGFTPHVITIAIGEDIATKLMSFSQQGP 180

Query: 535 RATCILSANGVISTVTLRQPSTSGGTVTYEGRFEIL 642
           R  CILSANG +STVTLR+PS+SGGTVTYEGRFEIL
Sbjct: 181 REVCILSANGAVSTVTLRKPSSSGGTVTYEGRFEIL 216



 Score = 60.8 bits (146), Expect(2) = 4e-53
 Identities = 34/62 (54%), Positives = 39/62 (62%)
 Frame = +2

Query: 710 LSGSYLQIDSGGSRGQTGDLSISLVSSDXXXXXXXXXXXLIAASPVQVIVGSFMCGSHKM 889
           LSGSYL   + GSR +TG LS+SL S D           LIAASPVQVIVGSF+ G  K 
Sbjct: 218 LSGSYLLTSNTGSRNRTGGLSVSLASPDGRAIGGGVGGMLIAASPVQVIVGSFIWGGSKA 277

Query: 890 KS 895
           K+
Sbjct: 278 KN 279


>ref|XP_003521051.1| PREDICTED: uncharacterized protein LOC100783475 [Glycine max]
          Length = 340

 Score =  157 bits (396), Expect(2) = 1e-49
 Identities = 97/214 (45%), Positives = 115/214 (53%), Gaps = 1/214 (0%)
 Frame = +1

Query: 4   MDPRNAMALSGSPSYYIQRELAGSVSXXXXXXXXXXXFLINPDDHYQTNIGSSST-GGTI 180
           MD  + M L GS SYY+QR + G+ +            L NP+   Q++IG   T G T+
Sbjct: 1   MDRGDQMTLPGSASYYMQRGIPGAGNQPVLHNSPNIGPLSNPNLPCQSSIGGGGTIGSTL 60

Query: 181 QADPSFANSPHGINVGVPAPVXXXXXXXXXXXXXXKYGPDXXXXXXXXXXXXXXXXXXXX 360
             + S  ++P  +NV  P+                KYG D                    
Sbjct: 61  PLESSGISAPC-VNVSAPSGTLPGETVKRKRGRPRKYGSDGAVSLALTPTPASHPGALAQ 119

Query: 361 XQKXXXXXXXXXXXKQQLAPLGEWLSGSAGMGFTPHVITIAAGEDITGKIMSVLQQESRA 540
            QK           KQQLA LGE +SGSAGMGFTPH+ITIA GEDI  KIMS  QQ  RA
Sbjct: 120 GQKRGRGRPPGSGKKQQLASLGELMSGSAGMGFTPHIITIAVGEDIATKIMSFSQQGPRA 179

Query: 541 TCILSANGVISTVTLRQPSTSGGTVTYEGRFEIL 642
            CILSANG +STVTLRQPSTSGGTVTYEGRFEI+
Sbjct: 180 ICILSANGAVSTVTLRQPSTSGGTVTYEGRFEIV 213



 Score = 66.6 bits (161), Expect(2) = 1e-49
 Identities = 38/68 (55%), Positives = 42/68 (61%)
 Frame = +2

Query: 710 LSGSYLQIDSGGSRGQTGDLSISLVSSDXXXXXXXXXXXLIAASPVQVIVGSFMCGSHKM 889
           LSGSYL  DSGGSR +TG LS+SL S D           LIAASPVQVI+GSF  G+ K 
Sbjct: 215 LSGSYLVADSGGSRNRTGGLSVSLASPDGRVVGGGVGGVLIAASPVQVILGSFSWGASKT 274

Query: 890 KSITNTGS 913
           K     GS
Sbjct: 275 KIKKKEGS 282


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