BLASTX nr result

ID: Bupleurum21_contig00006775 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00006775
         (277 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_171986.3| translocon at the inner envelope membrane of ch...    63   3e-08
gb|AEL98754.1| translocon-associated protein, partial [Silene la...    63   3e-08
gb|AEL98753.1| translocon-associated protein, partial [Silene la...    63   3e-08
ref|XP_002889528.1| hypothetical protein ARALYDRAFT_887669 [Arab...    63   3e-08
gb|ABB86268.1| Tic20-like protein [Solanum tuberosum]                  62   4e-08

>ref|NP_171986.3| translocon at the inner envelope membrane of chloroplasts 20
           [Arabidopsis thaliana]
           gi|75151589|sp|Q8GZ79.1|TI201_ARATH RecName:
           Full=Protein TIC 20-I, chloroplastic; AltName:
           Full=Translocon at the inner envelope membrane of
           chloroplasts 20-I; Short=AtTIC20-I; Flags: Precursor
           gi|26449432|dbj|BAC41843.1| unknown protein [Arabidopsis
           thaliana] gi|332189644|gb|AEE27765.1| translocon at the
           inner envelope membrane of chloroplasts 20 [Arabidopsis
           thaliana]
          Length = 274

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 29/31 (93%), Positives = 30/31 (96%)
 Frame = -1

Query: 277 TVLESMRCALAGMYADIPFVSDAAYIQIPYD 185
           TVLES+RCALAGMYADIPFV DAAYIQIPYD
Sbjct: 244 TVLESIRCALAGMYADIPFVCDAAYIQIPYD 274


>gb|AEL98754.1| translocon-associated protein, partial [Silene latifolia]
          Length = 266

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 28/31 (90%), Positives = 30/31 (96%)
 Frame = -1

Query: 277 TVLESMRCALAGMYADIPFVSDAAYIQIPYD 185
           TVLE+MRCALAGMYAD+PFV DAAYIQIPYD
Sbjct: 236 TVLEAMRCALAGMYADVPFVCDAAYIQIPYD 266


>gb|AEL98753.1| translocon-associated protein, partial [Silene latifolia]
          Length = 266

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 28/31 (90%), Positives = 30/31 (96%)
 Frame = -1

Query: 277 TVLESMRCALAGMYADIPFVSDAAYIQIPYD 185
           TVLE+MRCALAGMYAD+PFV DAAYIQIPYD
Sbjct: 236 TVLEAMRCALAGMYADVPFVCDAAYIQIPYD 266


>ref|XP_002889528.1| hypothetical protein ARALYDRAFT_887669 [Arabidopsis lyrata subsp.
           lyrata] gi|297335370|gb|EFH65787.1| hypothetical protein
           ARALYDRAFT_887669 [Arabidopsis lyrata subsp. lyrata]
          Length = 273

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 29/31 (93%), Positives = 30/31 (96%)
 Frame = -1

Query: 277 TVLESMRCALAGMYADIPFVSDAAYIQIPYD 185
           TVLES+RCALAGMYADIPFV DAAYIQIPYD
Sbjct: 243 TVLESIRCALAGMYADIPFVCDAAYIQIPYD 273


>gb|ABB86268.1| Tic20-like protein [Solanum tuberosum]
          Length = 271

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 28/31 (90%), Positives = 30/31 (96%)
 Frame = -1

Query: 277 TVLESMRCALAGMYADIPFVSDAAYIQIPYD 185
           TVLES+RCALAGMYAD+PFV DAAYIQIPYD
Sbjct: 241 TVLESIRCALAGMYADVPFVCDAAYIQIPYD 271


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