BLASTX nr result

ID: Bupleurum21_contig00006766 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00006766
         (946 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002329810.1| predicted protein [Populus trichocarpa] gi|2...   146   8e-33
gb|ABK96732.1| unknown [Populus trichocarpa x Populus deltoides]      146   8e-33
ref|XP_002519037.1| Stem-specific protein TSJT1, putative [Ricin...   143   5e-32
ref|XP_003540091.1| PREDICTED: stem-specific protein TSJT1-like ...   141   3e-31
gb|ABS01353.1| unknown [Carica papaya]                                141   3e-31

>ref|XP_002329810.1| predicted protein [Populus trichocarpa] gi|222870872|gb|EEF08003.1|
           predicted protein [Populus trichocarpa]
          Length = 255

 Score =  146 bits (368), Expect = 8e-33
 Identities = 74/117 (63%), Positives = 88/117 (75%), Gaps = 2/117 (1%)
 Frame = -1

Query: 946 LKDFLSSHS-NAFSLSFANDAVIAFAPPPHSYPNH-RLFCGVDDIYCTFXXXXXXXXXXN 773
           +KDF+S++  NAFSLSF + A++A+  P +SYP H RL CG+D IYC F          N
Sbjct: 35  VKDFVSANPPNAFSLSFGDAALLAYIQPGNSYPRHQRLLCGLDGIYCIFLGSLNNLCSLN 94

Query: 772 KQYGLSKCGNEAMFVIEAYRTLRDRGPYPAHQVLKDLDGTFGFVLYDAKAKTTFIAL 602
           KQYGLSKC NEAMF+IEAYRTLRDRGPYPAH+VL+DLDG FGFV+YD KA   F AL
Sbjct: 95  KQYGLSKCTNEAMFIIEAYRTLRDRGPYPAHKVLQDLDGRFGFVVYDTKAGQVFAAL 151


>gb|ABK96732.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 255

 Score =  146 bits (368), Expect = 8e-33
 Identities = 74/117 (63%), Positives = 88/117 (75%), Gaps = 2/117 (1%)
 Frame = -1

Query: 946 LKDFLSSHS-NAFSLSFANDAVIAFAPPPHSYPNH-RLFCGVDDIYCTFXXXXXXXXXXN 773
           +KDF+S++  NAFSLSF + A++A+  P +SYP H RL CG+D IYC F          N
Sbjct: 35  VKDFVSANPPNAFSLSFGDAALLAYIQPGNSYPRHQRLLCGLDGIYCIFLGSLNNLCSLN 94

Query: 772 KQYGLSKCGNEAMFVIEAYRTLRDRGPYPAHQVLKDLDGTFGFVLYDAKAKTTFIAL 602
           KQYGLSKC NEAMF+IEAYRTLRDRGPYPAH+VL+DLDG FGFV+YD KA   F AL
Sbjct: 95  KQYGLSKCTNEAMFIIEAYRTLRDRGPYPAHKVLQDLDGRFGFVVYDTKAGQVFAAL 151


>ref|XP_002519037.1| Stem-specific protein TSJT1, putative [Ricinus communis]
           gi|223541700|gb|EEF43248.1| Stem-specific protein TSJT1,
           putative [Ricinus communis]
          Length = 255

 Score =  143 bits (361), Expect = 5e-32
 Identities = 73/117 (62%), Positives = 88/117 (75%), Gaps = 2/117 (1%)
 Frame = -1

Query: 946 LKDFLSSH-SNAFSLSFANDAVIAFAPPPHSYPNH-RLFCGVDDIYCTFXXXXXXXXXXN 773
           LKDF SS  SNAFS+SF + A +A+ PP + +P H RLFCG++D+YC F          N
Sbjct: 35  LKDFASSDLSNAFSISFGDSASLAYIPPKNPFPIHQRLFCGLNDVYCIFLGSLNNLCSLN 94

Query: 772 KQYGLSKCGNEAMFVIEAYRTLRDRGPYPAHQVLKDLDGTFGFVLYDAKAKTTFIAL 602
           +QYGLSK  NEAMFVIEAY+TLRDRGPYPAHQVLK+L+GTFGFV+YD K+   F AL
Sbjct: 95  RQYGLSKGTNEAMFVIEAYKTLRDRGPYPAHQVLKELEGTFGFVVYDTKSGHVFAAL 151


>ref|XP_003540091.1| PREDICTED: stem-specific protein TSJT1-like [Glycine max]
          Length = 254

 Score =  141 bits (355), Expect = 3e-31
 Identities = 72/117 (61%), Positives = 87/117 (74%), Gaps = 2/117 (1%)
 Frame = -1

Query: 946 LKDFLSSHS-NAFSLSFANDAVIAFA-PPPHSYPNHRLFCGVDDIYCTFXXXXXXXXXXN 773
           L++FLS H  N FSLSF + AV+A+  P P S+ + RLFCG+DDIYC F          N
Sbjct: 35  LREFLSHHPHNTFSLSFGHSAVLAYTRPDPPSFVHQRLFCGIDDIYCIFLGSLNNLCSLN 94

Query: 772 KQYGLSKCGNEAMFVIEAYRTLRDRGPYPAHQVLKDLDGTFGFVLYDAKAKTTFIAL 602
           KQYGL+K  NEAMFVIEAY+TLRDRGPYPA QV+KDLDG+FGFV+YD+K  + F AL
Sbjct: 95  KQYGLAKGTNEAMFVIEAYKTLRDRGPYPADQVVKDLDGSFGFVVYDSKVGSVFAAL 151


>gb|ABS01353.1| unknown [Carica papaya]
          Length = 252

 Score =  141 bits (355), Expect = 3e-31
 Identities = 71/117 (60%), Positives = 89/117 (76%), Gaps = 2/117 (1%)
 Frame = -1

Query: 946 LKDFLSSH-SNAFSLSFANDAVIAFAPPPHSYP-NHRLFCGVDDIYCTFXXXXXXXXXXN 773
           L DF SSH +NAFS+ F + A++A++P  +S+  + RLFCG +D++C F          N
Sbjct: 35  LNDFSSSHPTNAFSVCFGDAALLAYSPSQNSHSKSQRLFCGYNDVHCIFLGSLNNLCSLN 94

Query: 772 KQYGLSKCGNEAMFVIEAYRTLRDRGPYPAHQVLKDLDGTFGFVLYDAKAKTTFIAL 602
           KQYGLSK G+EA+F IEAYRTLRDRGPYPAHQVLKDLDG FGFV+YDAKA+  F+AL
Sbjct: 95  KQYGLSKGGDEAVFAIEAYRTLRDRGPYPAHQVLKDLDGDFGFVIYDAKAQNVFVAL 151


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