BLASTX nr result

ID: Bupleurum21_contig00006762 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00006762
         (334 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276443.1| PREDICTED: uncharacterized protein LOC100245...    77   2e-12
emb|CAN65744.1| hypothetical protein VITISV_037761 [Vitis vinifera]    77   2e-12
ref|XP_002512577.1| DNA binding protein, putative [Ricinus commu...    76   3e-12
ref|XP_002519325.1| DNA binding protein, putative [Ricinus commu...    76   3e-12
ref|XP_004147629.1| PREDICTED: uncharacterized protein LOC101204...    69   5e-10

>ref|XP_002276443.1| PREDICTED: uncharacterized protein LOC100245891 [Vitis vinifera]
          Length = 314

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 36/79 (45%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
 Frame = -1

Query: 250 TPASCGQCGIDARPFLHHIRHRGMFRRLCTTCVLRVNSKSFCPTCFQIHDARAAALSFQS 71
           T   CG C +  R  LHH+RHRG++RRLCT+CVL+++   FCP CF+ +D         S
Sbjct: 6   TTPECGGCSLTDRWLLHHVRHRGIYRRLCTSCVLKLHPGLFCPICFEFYDPP------PS 59

Query: 70  PETIN-CSKCYSNSHSSCV 17
           P   + C KC S SH  CV
Sbjct: 60  PHLRSLCQKCPSISHQHCV 78


>emb|CAN65744.1| hypothetical protein VITISV_037761 [Vitis vinifera]
          Length = 1076

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 36/79 (45%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
 Frame = -1

Query: 250 TPASCGQCGIDARPFLHHIRHRGMFRRLCTTCVLRVNSKSFCPTCFQIHDARAAALSFQS 71
           T   CG C +  R  LHH+RHRG++RRLCT+CVL+++   FCP CF+ +D         S
Sbjct: 768 TTPECGGCSLTDRWLLHHVRHRGIYRRLCTSCVLKLHPGLFCPICFEFYDPP------PS 821

Query: 70  PETIN-CSKCYSNSHSSCV 17
           P   + C KC S SH  CV
Sbjct: 822 PHLRSLCQKCPSISHQHCV 840


>ref|XP_002512577.1| DNA binding protein, putative [Ricinus communis]
           gi|223548538|gb|EEF50029.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 230

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 36/82 (43%), Positives = 45/82 (54%)
 Frame = -1

Query: 250 TPASCGQCGIDARPFLHHIRHRGMFRRLCTTCVLRVNSKSFCPTCFQIHDARAAALSFQS 71
           T   CG C       LHH+R RG+ RRLCT+CVLR +  SFCP CF  +D      S   
Sbjct: 14  TIGGCGNCSSKETFLLHHVRVRGVHRRLCTSCVLRAHPSSFCPCCFTFYDTSPPPPS--- 70

Query: 70  PETINCSKCYSNSHSSCVGPNP 5
            + I+CS C S +HS C   +P
Sbjct: 71  -KRISCSNCTSFTHSHCATSSP 91


>ref|XP_002519325.1| DNA binding protein, putative [Ricinus communis]
           gi|223541640|gb|EEF43189.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 186

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 35/79 (44%), Positives = 47/79 (59%)
 Frame = -1

Query: 238 CGQCGIDARPFLHHIRHRGMFRRLCTTCVLRVNSKSFCPTCFQIHDARAAALSFQSPETI 59
           CG CG + R  LH++RHR  +RRLCT C+L+ +   FCP CF ++D   + L     E +
Sbjct: 7   CGGCGGENRWLLHNVRHRAAYRRLCTNCILKTHQGLFCPFCFHVYD-HDSLLVPAPEERV 65

Query: 58  NCSKCYSNSHSSCVGPNPN 2
            C KC S SH SC+ P  N
Sbjct: 66  MCLKCPSISHLSCLPPFHN 84


>ref|XP_004147629.1| PREDICTED: uncharacterized protein LOC101204799 [Cucumis sativus]
           gi|449498761|ref|XP_004160626.1| PREDICTED:
           uncharacterized protein LOC101231018 [Cucumis sativus]
          Length = 278

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 33/76 (43%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
 Frame = -1

Query: 238 CGQCGIDARP--FLHHIRHRGMFRRLCTTCVLRVNSKSFCPTCFQIHDARAAALSFQSPE 65
           C QCGI       LH++RH+  FRRLCT CVL+ N   FCP CF +++         S  
Sbjct: 17  CQQCGISQSACWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCFDVYEDSTPP---PSHH 73

Query: 64  TINCSKCYSNSHSSCV 17
            + C +C S SH SCV
Sbjct: 74  RVMCFRCPSISHLSCV 89


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