BLASTX nr result

ID: Bupleurum21_contig00006738 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00006738
         (452 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267720.1| PREDICTED: protein LHY-like [Vitis vinifera]       85   7e-15
emb|CAN81352.1| hypothetical protein VITISV_012722 [Vitis vinifera]    85   7e-15
ref|XP_002320238.1| predicted protein [Populus trichocarpa] gi|2...    82   6e-14
gb|ABK96054.1| unknown [Populus trichocarpa]                           82   6e-14
dbj|BAH09383.1| transcription factor LHY [Populus nigra] gi|2196...    79   3e-13

>ref|XP_002267720.1| PREDICTED: protein LHY-like [Vitis vinifera]
          Length = 771

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 44/80 (55%), Positives = 54/80 (67%)
 Frame = -2

Query: 451 SKVHETCPSHKFVEHNVPLTSRNNEAEDMMTMGISYLKFKGRRTGFKPYKRCSAEAKESR 272
           SK    C SH+ VE N  L   +N  E ++T+G+ Y K KGRRTGFKPYKRCS EA +SR
Sbjct: 689 SKAWGPCSSHQDVEKN-GLMENDNREEGLLTIGLGYGKIKGRRTGFKPYKRCSVEAIDSR 747

Query: 271 LTCNTNQEEAKAPKRMRLEG 212
           +T   +Q E K PKR+RLEG
Sbjct: 748 VTNCCSQGEEKGPKRIRLEG 767


>emb|CAN81352.1| hypothetical protein VITISV_012722 [Vitis vinifera]
          Length = 857

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 44/80 (55%), Positives = 54/80 (67%)
 Frame = -2

Query: 451  SKVHETCPSHKFVEHNVPLTSRNNEAEDMMTMGISYLKFKGRRTGFKPYKRCSAEAKESR 272
            SK    C SH+ VE N  L   +N  E ++T+G+ Y K KGRRTGFKPYKRCS EA +SR
Sbjct: 775  SKAWGPCSSHQDVEKN-GLMENDNREEGLLTIGLGYGKIKGRRTGFKPYKRCSVEAIDSR 833

Query: 271  LTCNTNQEEAKAPKRMRLEG 212
            +T   +Q E K PKR+RLEG
Sbjct: 834  VTNCCSQGEEKGPKRIRLEG 853


>ref|XP_002320238.1| predicted protein [Populus trichocarpa] gi|222861011|gb|EEE98553.1|
           predicted protein [Populus trichocarpa]
          Length = 750

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 41/80 (51%), Positives = 50/80 (62%)
 Frame = -2

Query: 451 SKVHETCPSHKFVEHNVPLTSRNNEAEDMMTMGISYLKFKGRRTGFKPYKRCSAEAKESR 272
           SK  E C  H+  E N      N   E+++T+G+ + K K RRTGFKPYKRCS EAKESR
Sbjct: 667 SKTWECCSGHQEGEKNALSRCENYGEEELLTIGLGHGKLKVRRTGFKPYKRCSLEAKESR 726

Query: 271 LTCNTNQEEAKAPKRMRLEG 212
               + Q E K PKR+RLEG
Sbjct: 727 TGTGSGQGEEKGPKRLRLEG 746


>gb|ABK96054.1| unknown [Populus trichocarpa]
          Length = 764

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 41/80 (51%), Positives = 50/80 (62%)
 Frame = -2

Query: 451 SKVHETCPSHKFVEHNVPLTSRNNEAEDMMTMGISYLKFKGRRTGFKPYKRCSAEAKESR 272
           SK  E C  H+  E N      N   E+++T+G+ + K K RRTGFKPYKRCS EAKESR
Sbjct: 681 SKTWECCSGHQEGEKNALSRCENYGEEELLTIGLGHGKLKVRRTGFKPYKRCSLEAKESR 740

Query: 271 LTCNTNQEEAKAPKRMRLEG 212
               + Q E K PKR+RLEG
Sbjct: 741 TGTGSGQGEEKGPKRLRLEG 760


>dbj|BAH09383.1| transcription factor LHY [Populus nigra]
           gi|219687749|dbj|BAH09385.1| PnLHY2 [Populus nigra]
          Length = 764

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 40/80 (50%), Positives = 49/80 (61%)
 Frame = -2

Query: 451 SKVHETCPSHKFVEHNVPLTSRNNEAEDMMTMGISYLKFKGRRTGFKPYKRCSAEAKESR 272
           +K  E C  H+  E N      N   E ++T+G+ + K K RRTGFKPYKRCS EAKESR
Sbjct: 681 TKTWECCSGHQEGEKNALSRCENYGEEGLLTIGLGHGKLKVRRTGFKPYKRCSLEAKESR 740

Query: 271 LTCNTNQEEAKAPKRMRLEG 212
               + Q E K PKR+RLEG
Sbjct: 741 TGTGSGQGEEKGPKRLRLEG 760


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