BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00006715
         (561 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36309.3| unnamed protein product [Vitis vinifera]              139   3e-31
emb|CBI33284.3| unnamed protein product [Vitis vinifera]              139   3e-31
ref|XP_002266428.1| PREDICTED: DNA-directed RNA polymerase III s...   136   3e-30
ref|XP_003635403.1| PREDICTED: DNA-directed RNA polymerase III s...   135   4e-30
ref|XP_003635557.1| PREDICTED: DNA-directed RNA polymerase III s...   135   4e-30

>emb|CBI36309.3| unnamed protein product [Vitis vinifera]
          Length = 493

 Score =  139 bits (350), Expect = 3e-31
 Identities = 75/158 (47%), Positives = 107/158 (67%), Gaps = 1/158 (0%)
 Frame = +2

Query: 89  LFLQGMNRLQDSMAHKRKRGEQSSLTQSLGEADRNVLDIIKGKKDLAIAIAEIRRLSKLP 268
           + + GM+R Q  ++ KRKR + ++ +Q L +A+R + D+I+ K+D+ I   +++R + LP
Sbjct: 86  ILILGMSRSQ-GLSLKRKRPDTNAASQPLLDAERVLYDLIRSKEDMGIWTRDMKRETNLP 144

Query: 269 ANQVNKSIKTLTTNQLIKEVPNIKYKV-KHYMAAEFEPSKELTGGQWYADGRLNQELIEF 445
            N V KS+K L   +LIKEV NI+ K  KHYMA EFEPSKELTGG WY +G L+ E I+ 
Sbjct: 145 DNVVTKSLKALQVKKLIKEVVNIQSKGRKHYMAVEFEPSKELTGGAWYVEGNLDTEYIKI 204

Query: 446 LKSTCLKIVGKLKVATAKGVHEFFIKYKVITEEVSYQQ 559
           LK TC+K++ KLKVATA+G+ E   K  +   E S QQ
Sbjct: 205 LKETCVKVLSKLKVATAEGISESINKTGLCATECSTQQ 242


>emb|CBI33284.3| unnamed protein product [Vitis vinifera]
          Length = 300

 Score =  139 bits (350), Expect = 3e-31
 Identities = 78/159 (49%), Positives = 108/159 (67%), Gaps = 2/159 (1%)
 Frame = +2

Query: 89  LFL-QGMNRLQDSMAHKRKRGEQSSLTQSLGEADRNVLDIIKGKKDLAIAIAEIRRLSKL 265
           LFL +GM+R Q S   KRKR + ++ +Q L +A+R + D+I+ K+D+ I   +++R + L
Sbjct: 56  LFLSEGMSRSQGSSL-KRKRPDTNTASQPLLDAERVLYDLIRSKEDMGIWTRDMKRETNL 114

Query: 266 PANQVNKSIKTLTTNQLIKEVPNIKYKV-KHYMAAEFEPSKELTGGQWYADGRLNQELIE 442
           P N V KS+K L   +LIKEV NI+ K  KHYMA EFEPSKELTGG WY +G L+ E I+
Sbjct: 115 PDNVVTKSLKALQVKKLIKEVVNIQSKGRKHYMAVEFEPSKELTGGAWYVEGNLDTEYIK 174

Query: 443 FLKSTCLKIVGKLKVATAKGVHEFFIKYKVITEEVSYQQ 559
            LK TC++++ KLKVATA+G+ E   K  +   E S QQ
Sbjct: 175 ILKKTCVRVLSKLKVATAEGISESINKTGLCATECSTQQ 213


>ref|XP_002266428.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like [Vitis
           vinifera]
          Length = 239

 Score =  136 bits (342), Expect = 3e-30
 Identities = 74/153 (48%), Positives = 104/153 (67%), Gaps = 1/153 (0%)
 Frame = +2

Query: 104 MNRLQDSMAHKRKRGEQSSLTQSLGEADRNVLDIIKGKKDLAIAIAEIRRLSKLPANQVN 283
           M+R Q  ++ KRKR + ++ +Q L +A+R + D+I+ K+D+ I   +++R + LP N V 
Sbjct: 1   MSRSQ-GLSLKRKRPDTNAASQPLLDAERVLYDLIRSKEDMGIWTRDMKRETNLPDNVVT 59

Query: 284 KSIKTLTTNQLIKEVPNIKYKV-KHYMAAEFEPSKELTGGQWYADGRLNQELIEFLKSTC 460
           KS+K L   +LIKEV NI+ K  KHYMA EFEPSKELTGG WY +G L+ E I+ LK TC
Sbjct: 60  KSLKALQVKKLIKEVVNIQSKGRKHYMAVEFEPSKELTGGAWYVEGNLDTEYIKILKETC 119

Query: 461 LKIVGKLKVATAKGVHEFFIKYKVITEEVSYQQ 559
           +K++ KLKVATA+G+ E   K  +   E S QQ
Sbjct: 120 VKVLSKLKVATAEGISESINKTGLCATECSTQQ 152


>ref|XP_003635403.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like [Vitis
           vinifera]
          Length = 239

 Score =  135 bits (340), Expect = 4e-30
 Identities = 74/153 (48%), Positives = 103/153 (67%), Gaps = 1/153 (0%)
 Frame = +2

Query: 104 MNRLQDSMAHKRKRGEQSSLTQSLGEADRNVLDIIKGKKDLAIAIAEIRRLSKLPANQVN 283
           M+R Q S   KRKR + ++ +Q L +A+R + D+I+ K+D+ I   +++R + LP N V 
Sbjct: 1   MSRSQGSSL-KRKRPDTNTASQPLLDAERVLYDLIRSKEDMGIWTRDMKRETNLPDNVVT 59

Query: 284 KSIKTLTTNQLIKEVPNIKYKV-KHYMAAEFEPSKELTGGQWYADGRLNQELIEFLKSTC 460
           KS+K L   +LIKEV NI+ K  KHYMA EFEPSKELTGG WY +G L+ E I+ LK TC
Sbjct: 60  KSLKALQVKKLIKEVVNIQSKGRKHYMAVEFEPSKELTGGAWYVEGNLDTEYIKILKETC 119

Query: 461 LKIVGKLKVATAKGVHEFFIKYKVITEEVSYQQ 559
           ++++ KLKVATA+G+ E   K  +   E S QQ
Sbjct: 120 VRVLSKLKVATAEGISESINKTGLCATECSTQQ 152


>ref|XP_003635557.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like [Vitis
           vinifera]
          Length = 239

 Score =  135 bits (340), Expect = 4e-30
 Identities = 74/153 (48%), Positives = 103/153 (67%), Gaps = 1/153 (0%)
 Frame = +2

Query: 104 MNRLQDSMAHKRKRGEQSSLTQSLGEADRNVLDIIKGKKDLAIAIAEIRRLSKLPANQVN 283
           M+R Q S   KRKR + ++ +Q L +A+R + D+I+ K+D+ I   +++R + LP N V 
Sbjct: 1   MSRSQGSSL-KRKRPDTNTASQPLLDAERVLYDLIRSKEDMGIWTRDMKRETNLPDNVVT 59

Query: 284 KSIKTLTTNQLIKEVPNIKYKV-KHYMAAEFEPSKELTGGQWYADGRLNQELIEFLKSTC 460
           KS+K L   +LIKEV NI+ K  KHYMA EFEPSKELTGG WY +G L+ E I+ LK TC
Sbjct: 60  KSLKALQVKKLIKEVVNIQSKGRKHYMAVEFEPSKELTGGAWYVEGNLDTEYIKILKKTC 119

Query: 461 LKIVGKLKVATAKGVHEFFIKYKVITEEVSYQQ 559
           ++++ KLKVATA+G+ E   K  +   E S QQ
Sbjct: 120 VRVLSKLKVATAEGISESINKTGLCATECSTQQ 152