BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00006707
         (1470 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29879.3| unnamed protein product [Vitis vinifera]              395   e-107
ref|XP_002277555.1| PREDICTED: DNA-directed RNA polymerase I sub...   395   e-107
ref|XP_002526734.1| DNA-directed RNA polymerase I largest subuni...   363   8e-98
ref|XP_004165748.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   343   9e-92
ref|XP_004136744.1| PREDICTED: DNA-directed RNA polymerase I sub...   343   9e-92

>emb|CBI29879.3| unnamed protein product [Vitis vinifera]
          Length = 1669

 Score =  395 bits (1016), Expect = e-107
 Identities = 227/464 (48%), Positives = 297/464 (64%), Gaps = 23/464 (4%)
 Frame = +3

Query: 3    AKALVAKLKMVTVADIIERVEICVMPLSIKKHNIYRIYKLKMKLKKQEL------VSQED 164
            A+ L AKLK VTVADI E +E+ ++P +++ H    IYKLKMKL +  L      +S ED
Sbjct: 1216 AERLAAKLKKVTVADITESMEVSIVPFTVQDHQTCSIYKLKMKLYEPALYPPHTGISLED 1275

Query: 165  CQETLEVMFLRELEDAIENHVKLLSKISGIKDFKEDVLSSSASEIGEDVXXXXXXXXXXX 344
            C+ETLE +F+RELEDAI+NH+ LLSKISGIK+F  D  S ++ E  ED            
Sbjct: 1276 CEETLEAVFVRELEDAIQNHLLLLSKISGIKNFLPDSRSMASKETDEDASGDGLAGGNGD 1335

Query: 345  XXXXXXXXXXA-------QKRKQQASDEIDYEDSVDGETNEVEPSTELVSEIDQVDDEIE 503
                      A       QKRKQQASDE+DY DS +GE +E EPS  L  EID V+DE+E
Sbjct: 1336 EDDDGEDDGGAEDLGLDAQKRKQQASDEMDYGDS-EGEPDEGEPSAGLTEEIDLVEDEVE 1394

Query: 504  ----SKIGQFEDVDEGDE-SSKMSCDEGVTSKARSTXXXXXXXXXXXXXRSCFVKTEGRH 668
                 ++G  +  DE  +  SK    +   +K  +              R+  VK +G +
Sbjct: 1395 ISNNEEVGISDPKDEDSKVPSKSKSSKNKKAKTEAKRKKRFRAIKKDFDRAILVKAKGTY 1454

Query: 669  FEVHFRFNDEPHILLSQIVQKAAKKVPLKGSGKIEHCQQLSYDVLEKQVLW-----EKDE 833
            FEVHFRF +EPHILL+QI QKAA KV ++ SGKI+ CQ +  D  + QV++     +K E
Sbjct: 1455 FEVHFRFTNEPHILLAQIAQKAANKVYIRSSGKIDLCQVI--DCNKDQVIYYGRDPKKRE 1512

Query: 834  NIAVXXXXXXXXXXXXXCALKAAGTNITAFWELQDILDVNHIYSNNISLMLNTYGVEVAR 1013
            NI                AL+ AG + TAFW++QD LDV ++YSNN+  MLNT+GVE AR
Sbjct: 1513 NIPGEEKKKLP-------ALQTAGVDFTAFWKMQDELDVRYVYSNNVHAMLNTFGVEAAR 1565

Query: 1014 KTIIKEVQDVFKIYGVEIDYRHLSLIADYMTFTGEYKPMSRHGMISESLSPFMKMSFETS 1193
             TIIKEV +VF  YGV+++ RHLSLIAD+MT +G Y+PM+RHG I+ES+SPF KM+FET+
Sbjct: 1566 ATIIKEVFNVFNAYGVKVNIRHLSLIADFMTHSGGYRPMNRHGGIAESVSPFSKMTFETA 1625

Query: 1194 SKFIVEAASQGLVDNMETPSARICLGLPVKLGTGSFEIMQNFEV 1325
            SKFIVEAAS G+ DN+E+ SARICLGLPVK+GTG F++MQ  E+
Sbjct: 1626 SKFIVEAASHGMTDNLESASARICLGLPVKMGTGCFDLMQKIEI 1669


>ref|XP_002277555.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA1-like [Vitis
            vinifera]
          Length = 1740

 Score =  395 bits (1016), Expect = e-107
 Identities = 227/464 (48%), Positives = 297/464 (64%), Gaps = 23/464 (4%)
 Frame = +3

Query: 3    AKALVAKLKMVTVADIIERVEICVMPLSIKKHNIYRIYKLKMKLKKQEL------VSQED 164
            A+ L AKLK VTVADI E +E+ ++P +++ H    IYKLKMKL +  L      +S ED
Sbjct: 1287 AERLAAKLKKVTVADITESMEVSIVPFTVQDHQTCSIYKLKMKLYEPALYPPHTGISLED 1346

Query: 165  CQETLEVMFLRELEDAIENHVKLLSKISGIKDFKEDVLSSSASEIGEDVXXXXXXXXXXX 344
            C+ETLE +F+RELEDAI+NH+ LLSKISGIK+F  D  S ++ E  ED            
Sbjct: 1347 CEETLEAVFVRELEDAIQNHLLLLSKISGIKNFLPDSRSMASKETDEDASGDGLAGGNGD 1406

Query: 345  XXXXXXXXXXA-------QKRKQQASDEIDYEDSVDGETNEVEPSTELVSEIDQVDDEIE 503
                      A       QKRKQQASDE+DY DS +GE +E EPS  L  EID V+DE+E
Sbjct: 1407 EDDDGEDDGGAEDLGLDAQKRKQQASDEMDYGDS-EGEPDEGEPSAGLTEEIDLVEDEVE 1465

Query: 504  ----SKIGQFEDVDEGDE-SSKMSCDEGVTSKARSTXXXXXXXXXXXXXRSCFVKTEGRH 668
                 ++G  +  DE  +  SK    +   +K  +              R+  VK +G +
Sbjct: 1466 ISNNEEVGISDPKDEDSKVPSKSKSSKNKKAKTEAKRKKRFRAIKKDFDRAILVKAKGTY 1525

Query: 669  FEVHFRFNDEPHILLSQIVQKAAKKVPLKGSGKIEHCQQLSYDVLEKQVLW-----EKDE 833
            FEVHFRF +EPHILL+QI QKAA KV ++ SGKI+ CQ +  D  + QV++     +K E
Sbjct: 1526 FEVHFRFTNEPHILLAQIAQKAANKVYIRSSGKIDLCQVI--DCNKDQVIYYGRDPKKRE 1583

Query: 834  NIAVXXXXXXXXXXXXXCALKAAGTNITAFWELQDILDVNHIYSNNISLMLNTYGVEVAR 1013
            NI                AL+ AG + TAFW++QD LDV ++YSNN+  MLNT+GVE AR
Sbjct: 1584 NIPGEEKKKLP-------ALQTAGVDFTAFWKMQDELDVRYVYSNNVHAMLNTFGVEAAR 1636

Query: 1014 KTIIKEVQDVFKIYGVEIDYRHLSLIADYMTFTGEYKPMSRHGMISESLSPFMKMSFETS 1193
             TIIKEV +VF  YGV+++ RHLSLIAD+MT +G Y+PM+RHG I+ES+SPF KM+FET+
Sbjct: 1637 ATIIKEVFNVFNAYGVKVNIRHLSLIADFMTHSGGYRPMNRHGGIAESVSPFSKMTFETA 1696

Query: 1194 SKFIVEAASQGLVDNMETPSARICLGLPVKLGTGSFEIMQNFEV 1325
            SKFIVEAAS G+ DN+E+ SARICLGLPVK+GTG F++MQ  E+
Sbjct: 1697 SKFIVEAASHGMTDNLESASARICLGLPVKMGTGCFDLMQKIEI 1740


>ref|XP_002526734.1| DNA-directed RNA polymerase I largest subunit, putative [Ricinus
            communis] gi|223533923|gb|EEF35648.1| DNA-directed RNA
            polymerase I largest subunit, putative [Ricinus communis]
          Length = 1686

 Score =  363 bits (931), Expect = 8e-98
 Identities = 220/475 (46%), Positives = 281/475 (59%), Gaps = 34/475 (7%)
 Frame = +3

Query: 3    AKALVAKLKMVTVADIIERVEICVMPLSIKKHNIYRIYKLKMKLKKQEL------VSQED 164
            A  L  KL+ VTVADI+E +E+ V+P +I+   + RIYKLKMKL +         +S ED
Sbjct: 1217 ADHLADKLRKVTVADIVESMEVSVVPFAIQDGGVCRIYKLKMKLYRPAHYPQYANISVED 1276

Query: 165  CQETLEVMFLRELEDAIENHVKLLSKISGIKDFKEDVLSSSASEIGEDVXXXXXXXXXXX 344
             +ETLEV+FLRELEDAI+NH+ LLS+ISGIKDF  +  S ++ E  EDV           
Sbjct: 1277 WEETLEVVFLRELEDAIQNHMFLLSRISGIKDFLPESRSRASGEADEDVAGDMSHREERD 1336

Query: 345  XXXXXXXXXXA-------QKRKQQASDEIDYEDSVDGETNEVEPSTE-----LVSEIDQV 488
                      A       QKRK QA+DE+DY+D  + E NE E +         SEIDQ 
Sbjct: 1337 DDNDDDDGERADDLGLDAQKRKLQATDEMDYDDGFEEELNEGESTASEEESGFESEIDQG 1396

Query: 489  DDEIESKIGQFEDVDEGD----------ESSKMSCD-----EGVTSKARSTXXXXXXXXX 623
            D+E E       D +  +          +S K + +     E    K +           
Sbjct: 1397 DNETEISNDVMLDNEASETLPLRKPSKPKSKKKAAESPSHGEKSKDKKKKPKAKRKSRIS 1456

Query: 624  XXXXRSCFVKTEGRHFEVHFRFNDEPHILLSQIVQKAAKKVPLKGSGKIEHCQQLSYDVL 803
                R+ FV+    HFEVHF+F +EPHILL++I QK AKKV ++  GKIE C+    D  
Sbjct: 1457 KDFDRAIFVEARKMHFEVHFKFTNEPHILLAEIAQKTAKKVYIQNPGKIEQCRVT--DCK 1514

Query: 804  EKQVLWE-KDENIAVXXXXXXXXXXXXXCALKAAGTNITAFWELQDILDVNHIYSNNISL 980
            E QV++  KD    V              AL A G +   FW++QD LDV +IYSNNI  
Sbjct: 1515 ESQVIYYGKDPKERVDLKPDVKEKVP---ALHATGVDFNTFWKMQDHLDVRYIYSNNIHA 1571

Query: 981  MLNTYGVEVARKTIIKEVQDVFKIYGVEIDYRHLSLIADYMTFTGEYKPMSRHGMISESL 1160
            ML TYGVE AR+TII+E+  VFK YG+ +  RHLSLIAD+MT TG Y+PMSR G I+ES+
Sbjct: 1572 MLKTYGVEAARETIIREINHVFKSYGIAVSNRHLSLIADFMTHTGGYRPMSRMGGIAESI 1631

Query: 1161 SPFMKMSFETSSKFIVEAASQGLVDNMETPSARICLGLPVKLGTGSFEIMQNFEV 1325
            SPF KMSFET+SKFIVEAA  G +DN+ETPSARICLGLPVK+GTGSF++MQ  E+
Sbjct: 1632 SPFSKMSFETASKFIVEAALHGEIDNLETPSARICLGLPVKMGTGSFDLMQKLEI 1686


>ref|XP_004165748.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase I subunit
            RPA1-like [Cucumis sativus]
          Length = 1652

 Score =  343 bits (879), Expect = 9e-92
 Identities = 206/460 (44%), Positives = 273/460 (59%), Gaps = 19/460 (4%)
 Frame = +3

Query: 3    AKALVAKLKMVTVADIIERVEICVMPLSIKKHNIYRIYKLKMKLKKQEL------VSQED 164
            AK L  KLK +TVADIIE + + V+P S +K  I  IYKL++     E       +S ED
Sbjct: 1198 AKGLANKLKKITVADIIESMNVTVVPFSQRKREICSIYKLRIDFYPLENNAQHGHISPED 1257

Query: 165  CQETLEVMFLRELEDAIENHVKLLSKISGIKDFKEDVLSSSASEIGEDVXXXXXXXXXXX 344
             + TLE +FL ELE  IE  + LLSKI+GIK F  D  S  +SE G++V           
Sbjct: 1258 LENTLETVFLEELEGLIEREMVLLSKINGIKXFVPDSQSKGSSE-GDEVSSSRQEEMDDD 1316

Query: 345  XXXXXXXXXX-----AQKRKQQASDEIDYEDSVDGETNEVEPSTELVSEIDQVDD-EIES 506
                            +K+K QA+DE+DYED  + + N  E ST   SE+DQ D+ EI +
Sbjct: 1317 DEGNDLDVAEDLGSDXEKQKLQANDEMDYEDDSEDDLNAKESSTGFESEVDQGDEAEITN 1376

Query: 507  -------KIGQFEDVDEGDESSKMSCDEGVTSKARSTXXXXXXXXXXXXXRSCFVKTEGR 665
                   K    E+  E  + SK    E  T  ++               RS FV+ +  
Sbjct: 1377 NDMIEIVKDSASENQPEIVDVSKSMSKEKTTETSKEKKKVKSELVRKETDRSIFVEAKEN 1436

Query: 666  HFEVHFRFNDEPHILLSQIVQKAAKKVPLKGSGKIEHCQQLSYDVLEKQVLWEKDENIAV 845
            HFEVHF+F +EPH LLSQIVQ+AA+KV ++ SGKI  CQQ++    E QV++    N   
Sbjct: 1437 HFEVHFKFTNEPHTLLSQIVQRAAQKVSIQRSGKIIQCQQITCK--EGQVIYHG--NNLK 1492

Query: 846  XXXXXXXXXXXXXCALKAAGTNITAFWELQDILDVNHIYSNNISLMLNTYGVEVARKTII 1025
                          AL+ +G +    WE+QD LDV +IYSN+I  ML TYGVE AR TII
Sbjct: 1493 ERKNLKPEEKEKIPALQTSGVDFKTLWEMQDELDVRYIYSNDIHAMLQTYGVEAARATII 1552

Query: 1026 KEVQDVFKIYGVEIDYRHLSLIADYMTFTGEYKPMSRHGMISESLSPFMKMSFETSSKFI 1205
            +E+Q++F  YG+ ++ RHLSL+ADYMT +G Y+PMSR G IS+S+SPF +M+FET+ KFI
Sbjct: 1553 REIQNIFTSYGISVNIRHLSLVADYMTHSGGYRPMSRLGGISDSISPFSRMTFETAGKFI 1612

Query: 1206 VEAASQGLVDNMETPSARICLGLPVKLGTGSFEIMQNFEV 1325
            V+AA  G VDN+ETPS+RICLGLPVK+GTGSF++MQ  EV
Sbjct: 1613 VQAALHGEVDNLETPSSRICLGLPVKMGTGSFDLMQKIEV 1652


>ref|XP_004136744.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA1-like [Cucumis
            sativus]
          Length = 1650

 Score =  343 bits (879), Expect = 9e-92
 Identities = 206/461 (44%), Positives = 274/461 (59%), Gaps = 20/461 (4%)
 Frame = +3

Query: 3    AKALVAKLKMVTVADIIERVEICVMPLSIKKHNIYRIYKLKMKLKKQEL------VSQED 164
            AK L  KLK +TVADIIE + + V+P S +K  I  IYKL++     E       +S ED
Sbjct: 1195 AKGLANKLKKITVADIIESMNVTVVPFSQRKREICSIYKLRIDFYPLENNAQHGHISPED 1254

Query: 165  CQETLEVMFLRELEDAIENHVKLLSKISGIKDFKEDVLSSSASEIGEDVXXXXXXXXXXX 344
             + TLE +FL ELE  IE  + LLSKI+GIK+F  D  S  +SE G++V           
Sbjct: 1255 LENTLETVFLEELEGLIEREMVLLSKINGIKNFVPDSQSKGSSE-GDEVSSSRQKENDDD 1313

Query: 345  XXXXXXXXXXA------QKRKQQASDEIDYEDSVDGETNEVEPSTELVSEIDQVDD-EIE 503
                             +K+K QA+DE+DYED  + + N  E ST   SE+DQ D+ EI 
Sbjct: 1314 DDEGNDLDVAEDLGSDMKKQKLQANDEMDYEDDSEDDLNAKESSTGFESEVDQGDEAEIT 1373

Query: 504  S-------KIGQFEDVDEGDESSKMSCDEGVTSKARSTXXXXXXXXXXXXXRSCFVKTEG 662
            +       K    E+  E  + SK    E  T  ++               RS FV+ + 
Sbjct: 1374 NNDMIEIVKDSASENQPEIVDVSKSMSKEKTTETSKEKKKVKSELVRKETDRSIFVEAKE 1433

Query: 663  RHFEVHFRFNDEPHILLSQIVQKAAKKVPLKGSGKIEHCQQLSYDVLEKQVLWEKDENIA 842
             HFEVHF+F +EPH LLSQIVQ+AA+KV ++ SGKI  CQQ++    E QV++    N  
Sbjct: 1434 NHFEVHFKFTNEPHTLLSQIVQRAAQKVSIQRSGKIIQCQQITCK--EGQVIYHG--NNL 1489

Query: 843  VXXXXXXXXXXXXXCALKAAGTNITAFWELQDILDVNHIYSNNISLMLNTYGVEVARKTI 1022
                           AL+ +G +    WE+QD LDV +IYSN+I  ML TYGVE AR TI
Sbjct: 1490 KERKNLKPEEKEKIPALQTSGVDFKTLWEMQDELDVRYIYSNDIHAMLQTYGVEAARATI 1549

Query: 1023 IKEVQDVFKIYGVEIDYRHLSLIADYMTFTGEYKPMSRHGMISESLSPFMKMSFETSSKF 1202
            I+E+Q++F  YG+ ++ RHLSL+ADYMT +G Y+PMSR G IS+S+SPF +M+FET+ KF
Sbjct: 1550 IREIQNIFTSYGISVNIRHLSLVADYMTHSGGYRPMSRLGGISDSISPFSRMTFETAGKF 1609

Query: 1203 IVEAASQGLVDNMETPSARICLGLPVKLGTGSFEIMQNFEV 1325
            IV+AA  G VDN+ETPS+RICLGLPVK+GTGSF++MQ  EV
Sbjct: 1610 IVQAALHGEVDNLETPSSRICLGLPVKMGTGSFDLMQKIEV 1650