BLASTX nr result

ID: Bupleurum21_contig00006682 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00006682
         (281 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264265.1| PREDICTED: selT-like protein [Vitis vinifera...   144   1e-32
emb|CAN83419.1| hypothetical protein VITISV_024323 [Vitis vinifera]   144   1e-32
ref|XP_002532115.1| Selenoprotein T precursor, putative [Ricinus...   134   1e-29
gb|ABK95408.1| unknown [Populus trichocarpa]                          132   2e-29
ref|XP_002322986.1| predicted protein [Populus trichocarpa] gi|2...   129   2e-28

>ref|XP_002264265.1| PREDICTED: selT-like protein [Vitis vinifera]
           gi|296083168|emb|CBI22804.3| unnamed protein product
           [Vitis vinifera]
          Length = 227

 Score =  144 bits (362), Expect = 1e-32
 Identities = 67/93 (72%), Positives = 74/93 (79%)
 Frame = -1

Query: 281 NIDFCSSCSYKGNAVTMKNMLESSYPGINVVLANYXXXXXXXXXXXXXXXVQFGMIGVVM 102
           NI+FCSSCSY+GNAVTMKNMLES +PG+ VVLANY               VQ G+IG+VM
Sbjct: 69  NINFCSSCSYRGNAVTMKNMLESQFPGVTVVLANYPPPLPKRLLSKVVPVVQIGVIGIVM 128

Query: 101 GGEQIFPRLGFVAPPPWYYSLRANRFGTISTTW 3
            GEQIFPRLGF+APPPWYYSLRANRFGTISTTW
Sbjct: 129 AGEQIFPRLGFIAPPPWYYSLRANRFGTISTTW 161


>emb|CAN83419.1| hypothetical protein VITISV_024323 [Vitis vinifera]
          Length = 232

 Score =  144 bits (362), Expect = 1e-32
 Identities = 67/93 (72%), Positives = 74/93 (79%)
 Frame = -1

Query: 281 NIDFCSSCSYKGNAVTMKNMLESSYPGINVVLANYXXXXXXXXXXXXXXXVQFGMIGVVM 102
           NI+FCSSCSY+GNAVTMKNMLES +PG+ VVLANY               VQ G+IG+VM
Sbjct: 74  NINFCSSCSYRGNAVTMKNMLESQFPGVTVVLANYPPPLPKRLLSKVVPVVQIGVIGIVM 133

Query: 101 GGEQIFPRLGFVAPPPWYYSLRANRFGTISTTW 3
            GEQIFPRLGF+APPPWYYSLRANRFGTISTTW
Sbjct: 134 AGEQIFPRLGFIAPPPWYYSLRANRFGTISTTW 166


>ref|XP_002532115.1| Selenoprotein T precursor, putative [Ricinus communis]
           gi|223528218|gb|EEF30277.1| Selenoprotein T precursor,
           putative [Ricinus communis]
          Length = 230

 Score =  134 bits (336), Expect = 1e-29
 Identities = 60/93 (64%), Positives = 71/93 (76%)
 Frame = -1

Query: 281 NIDFCSSCSYKGNAVTMKNMLESSYPGINVVLANYXXXXXXXXXXXXXXXVQFGMIGVVM 102
           NIDFC+SCSY+G A+TMKNMLES YPGIN+VLANY               VQFG+IG++ 
Sbjct: 83  NIDFCASCSYRGTAMTMKNMLESQYPGINIVLANYPPSFPKRLLSKVVPVVQFGIIGLIT 142

Query: 101 GGEQIFPRLGFVAPPPWYYSLRANRFGTISTTW 3
            GE IFPRLGF  PPPWYYSLRAN+FG+I++TW
Sbjct: 143 AGEHIFPRLGFAVPPPWYYSLRANKFGSIASTW 175


>gb|ABK95408.1| unknown [Populus trichocarpa]
          Length = 223

 Score =  132 bits (333), Expect = 2e-29
 Identities = 60/93 (64%), Positives = 72/93 (77%)
 Frame = -1

Query: 281 NIDFCSSCSYKGNAVTMKNMLESSYPGINVVLANYXXXXXXXXXXXXXXXVQFGMIGVVM 102
           NI+FC SCSY+G AVTMKNMLES +PGI V+LAN+               VQFG+IG+++
Sbjct: 80  NINFCVSCSYRGTAVTMKNMLESEFPGIQVILANHPASLPKRLLSKVVPAVQFGIIGIIL 139

Query: 101 GGEQIFPRLGFVAPPPWYYSLRANRFGTISTTW 3
            GEQIFPRLGF APPPWYYSLRANRFG+I++TW
Sbjct: 140 AGEQIFPRLGFAAPPPWYYSLRANRFGSIASTW 172


>ref|XP_002322986.1| predicted protein [Populus trichocarpa] gi|222867616|gb|EEF04747.1|
           predicted protein [Populus trichocarpa]
          Length = 223

 Score =  129 bits (325), Expect = 2e-28
 Identities = 59/93 (63%), Positives = 71/93 (76%)
 Frame = -1

Query: 281 NIDFCSSCSYKGNAVTMKNMLESSYPGINVVLANYXXXXXXXXXXXXXXXVQFGMIGVVM 102
           NI+FC SCSY+G AVTMKNMLES +PGI V+LAN+               VQFG+IG+++
Sbjct: 80  NINFCVSCSYRGTAVTMKNMLESEFPGIQVILANHPAPLPKRLLSKVVPAVQFGIIGIIL 139

Query: 101 GGEQIFPRLGFVAPPPWYYSLRANRFGTISTTW 3
            GEQIFPRLGF APP WYYSLRANRFG+I++TW
Sbjct: 140 AGEQIFPRLGFAAPPSWYYSLRANRFGSIASTW 172


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