BLASTX nr result

ID: Bupleurum21_contig00006679 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00006679
         (996 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265221.2| PREDICTED: uncharacterized protein LOC100263...    94   5e-17
emb|CAN71153.1| hypothetical protein VITISV_022650 [Vitis vinifera]    92   2e-16
ref|XP_002300592.1| predicted protein [Populus trichocarpa] gi|2...    81   4e-13
ref|XP_002330534.1| predicted protein [Populus trichocarpa] gi|2...    72   2e-10

>ref|XP_002265221.2| PREDICTED: uncharacterized protein LOC100263414 [Vitis vinifera]
          Length = 1576

 Score = 94.0 bits (232), Expect = 5e-17
 Identities = 74/238 (31%), Positives = 110/238 (46%), Gaps = 7/238 (2%)
 Frame = -2

Query: 995  DYYSYHQVVAQSPVVFKQERKQDTIRQQHNANWSTKFEGYADVRTPLTPFHAPGVKFPSM 816
            DY+ +H ++      + Q+   +T+ Q         FEG+ + +TP     A    FP+ 
Sbjct: 1335 DYHYFHHMIPPGSFRYIQD-PHNTVGQCSGIRLPNSFEGHCNPKTP----QALEGMFPNK 1389

Query: 815  NAAGAFKAPLGQLDYKGGINMLTEEQRSNNRPDKPHSYGLEKNVVTSGGKGWGVDSTTG- 639
            +  GAF A LG  DYKG  N++T++ R   R      Y +EK    S    +   S+ G 
Sbjct: 1390 HMGGAFAASLGPHDYKGEYNLVTQQNRPTTRLGATSVYHMEK-ATNSPHPQYRNSSSMGS 1448

Query: 638  --REIIIIDDSTDNEAGS----AINTKCNNGMGRIAVSSSGYSVPGTSEFGTRFVTPYYS 477
              +EIIIIDD+ ++EA S    A +TKC   +    V S+   +P    +  R + P   
Sbjct: 1449 SIKEIIIIDDTPESEADSTTDDAKHTKC---LRESQVPSADNLIPAPPNYNLRHLNPLSR 1505

Query: 476  NQLDCAGSLYGGPPTLHNASFQVPISEGINASPVKWNRNPEGVSFLRRVL*LGAPSSS 303
             Q     SL G  PT H+  F VP S   N SPVKW    E    ++R   + + SS+
Sbjct: 1506 YQSQDPSSL-GESPTAHSNCFIVPPSRRTNTSPVKWGCTSESSGIIQRNPFIASSSST 1562


>emb|CAN71153.1| hypothetical protein VITISV_022650 [Vitis vinifera]
          Length = 1460

 Score = 92.0 bits (227), Expect = 2e-16
 Identities = 73/238 (30%), Positives = 109/238 (45%), Gaps = 7/238 (2%)
 Frame = -2

Query: 995  DYYSYHQVVAQSPVVFKQERKQDTIRQQHNANWSTKFEGYADVRTPLTPFHAPGVKFPSM 816
            DY+ +H ++      + Q+   +T+ Q         FEG+ + +TP     A    FP+ 
Sbjct: 1219 DYHYFHHMIPPGSFRYIQD-PHNTVGQCSGIRLPNSFEGHCNPKTP----QALEGMFPNK 1273

Query: 815  NAAGAFKAPLGQLDYKGGINMLTEEQRSNNRPDKPHSYGLEKNVVTSGGKGWGVDSTTG- 639
            +  GAF A LG  DYKG  N++T++ R   R      Y +EK    S    +   S+ G 
Sbjct: 1274 HMGGAFAASLGPHDYKGEYNLVTQQNRPTTRLGATSVYHMEK-ATNSPHPQYRNSSSMGS 1332

Query: 638  --REIIIIDDSTDNEAGS----AINTKCNNGMGRIAVSSSGYSVPGTSEFGTRFVTPYYS 477
              +EIIIIDD+ ++EA S    A +TKC   +    V S+   +P    +  R + P   
Sbjct: 1333 SIKEIIIIDDTPESEADSTTDDAKHTKC---LRESQVPSADNLIPAPPNYNLRHLNPLSR 1389

Query: 476  NQLDCAGSLYGGPPTLHNASFQVPISEGINASPVKWNRNPEGVSFLRRVL*LGAPSSS 303
             Q      L G  PT H+  F VP S   N SPVKW    E    ++R   + + SS+
Sbjct: 1390 YQSQDPSXL-GESPTAHSNCFIVPPSRRTNTSPVKWGCTSESSGIIQRNPFIASSSST 1446


>ref|XP_002300592.1| predicted protein [Populus trichocarpa] gi|222847850|gb|EEE85397.1|
            predicted protein [Populus trichocarpa]
          Length = 1480

 Score = 80.9 bits (198), Expect = 4e-13
 Identities = 64/234 (27%), Positives = 98/234 (41%), Gaps = 3/234 (1%)
 Frame = -2

Query: 995  DYYSYHQVVAQSPVVFKQERKQDTIRQQHNANWSTKFEGYADVRTPLTPFHAPGVKFPSM 816
            D +S+H+V  Q   +F ++    T  Q+ +   S  F  + D + P  P   P   F   
Sbjct: 1233 DSHSFHRVTPQGFAIFSRDPYYKTAVQRFDVGLSNSFGSHTDSKLPRAPSQLPAGMFCDQ 1292

Query: 815  NAAGAFKAPLGQLDYKGGINMLTEEQRSNNRPDKPHSYGLEKNVVTSGGKGWGVDSTTG- 639
               G F   +     K   N  + + R   R D   +  ++K   T   +    DS+   
Sbjct: 1293 QNDGGFVTSMKPQQCKDDYNFSSSQNRLKRRLDAFPTCTMQKATETPDRQCKRADSSAHP 1352

Query: 638  -REIIIIDDSTDNEAGSAIN-TKCNNGMGRIAVSSSGYSVPGTSEFGTRFVTPYYSNQLD 465
             +EIIIIDD  +++     + T+ N G        SG SVP    +    V P+   Q  
Sbjct: 1353 VKEIIIIDDVPESQTVVISDITRYNEGWRERQAVPSGISVPTIPVYNMSNVNPFTCYQSQ 1412

Query: 464  CAGSLYGGPPTLHNASFQVPISEGINASPVKWNRNPEGVSFLRRVL*LGAPSSS 303
                L GG P LHN +F    +  +N SPV+W    EG S L++   + A +SS
Sbjct: 1413 DHPPL-GGTPLLHNGNFHATATRLVNTSPVRWGCPSEGPSVLQQNPFVAASNSS 1465


>ref|XP_002330534.1| predicted protein [Populus trichocarpa] gi|222872092|gb|EEF09223.1|
            predicted protein [Populus trichocarpa]
          Length = 1498

 Score = 72.0 bits (175), Expect = 2e-10
 Identities = 61/234 (26%), Positives = 99/234 (42%), Gaps = 3/234 (1%)
 Frame = -2

Query: 995  DYYSYHQVVAQSPVVFKQERKQDTIRQQHNANWSTKFEGYADVRTPLTPFHAPGVKFPSM 816
            D +S+H +  Q  V+F ++  +  + Q+ +A +S  F  + D +    P   P   F   
Sbjct: 1253 DSHSFHPMTPQGSVIFSRDPYKTAV-QRLDAGFSDSFGSHTDSKLSQAPSKLPAGMFCDQ 1311

Query: 815  NAAGAFKAPLGQLDYKGGINMLTEEQRSNNRPDKPHSYGLEKNVVTSGGKGWGVDSTTG- 639
            ++ G     +     K   N  + + R   R +   +  +++   T        DS T  
Sbjct: 1312 HSDGGLAPSIKPHQCKEDYNFSSSQNRLKRRLETFPTCTMKRATETPDRHCKRADSFTHP 1371

Query: 638  -REIIIIDDSTDNEAGSAIN-TKCNNGMGRIAVSSSGYSVPGTSEFGTRFVTPYYSNQLD 465
             +EIIIIDD  +++     + TK N G     V  SG SVP    +    V P+   Q  
Sbjct: 1372 VKEIIIIDDVPESQTVVMSDITKYNEGWRERQVFPSGISVPTIPIYNMTNVNPFTCYQSQ 1431

Query: 464  CAGSLYGGPPTLHNASFQVPISEGINASPVKWNRNPEGVSFLRRVL*LGAPSSS 303
                + GG P  HN SF    +  +N SPV+W   P+G   L+    + A +SS
Sbjct: 1432 EHPPI-GGTPVAHNGSFHASTTRLVNTSPVRWGCPPDGPGALQMNPFVAASNSS 1484


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