BLASTX nr result

ID: Bupleurum21_contig00006661 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00006661
         (876 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283240.1| PREDICTED: uncharacterized protein LOC100251...   213   6e-53
ref|XP_002322608.1| predicted protein [Populus trichocarpa] gi|2...   208   1e-51
ref|XP_002307959.1| predicted protein [Populus trichocarpa] gi|2...   202   8e-50
ref|XP_002521584.1| r3h domain containing protein, putative [Ric...   197   2e-48
ref|XP_004167787.1| PREDICTED: uncharacterized protein LOC101224...   189   5e-46

>ref|XP_002283240.1| PREDICTED: uncharacterized protein LOC100251643 [Vitis vinifera]
           gi|147820324|emb|CAN73572.1| hypothetical protein
           VITISV_007445 [Vitis vinifera]
           gi|297741684|emb|CBI32816.3| unnamed protein product
           [Vitis vinifera]
          Length = 356

 Score =  213 bits (541), Expect = 6e-53
 Identities = 111/208 (53%), Positives = 139/208 (66%), Gaps = 4/208 (1%)
 Frame = -3

Query: 871 KRSSXXXXXXXXXXXXXXXXRIFSAPNSPESEETVFRVQADVKTDHHPVVESEVTGHAVS 692
           KRSS                RIFS P SP+S++T+ +  AD K       E+E   ++++
Sbjct: 149 KRSSVRTVEERKEEYDKARARIFSTPASPDSDDTLPQAPADGKNLCLNGDENEGCRNSMA 208

Query: 691 ELERNFSGRDGGV--RVAIFRDSEKDRSDPDYDRSYNRYVRNVPNTQNLNLAPFSMQTFH 518
           + E+N S RD G   RVAIFRD EKDR+DPDYDRSY RYVRN+P  Q+ +LAPF  Q   
Sbjct: 209 DPEKNISIRDSGTSSRVAIFRDREKDRTDPDYDRSYERYVRNLPTNQSFSLAPFDAQKIQ 268

Query: 517 PSYLNYDPVMPQLRQLPSAQASIGYR--NPVMNPLCAIGLNQTPCDSVYMQWPSQAVMYP 344
             +L YD   PQL Q+   QAS+ YR  NP+MNP CA+GLNQT  D+VY+QWPS ++MY 
Sbjct: 269 HPFLQYDTGFPQLGQIQRTQASLSYRPSNPIMNPFCAMGLNQTSRDAVYLQWPSHSMMYA 328

Query: 343 QPYDQFRHAVFQAPFCQQPLSFEYSQNY 260
             Y+QFRHAVFQAPFCQQPLSF+YSQN+
Sbjct: 329 HSYEQFRHAVFQAPFCQQPLSFDYSQNH 356


>ref|XP_002322608.1| predicted protein [Populus trichocarpa] gi|222867238|gb|EEF04369.1|
           predicted protein [Populus trichocarpa]
          Length = 354

 Score =  208 bits (530), Expect = 1e-51
 Identities = 104/187 (55%), Positives = 131/187 (70%), Gaps = 4/187 (2%)
 Frame = -3

Query: 808 IFSAPNSPESEETVFRVQADVKTDHHPVVESEVTGHAVSELERNFSGRDG-GVRVAIFRD 632
           IFS+P+SP +++TV ++  D K       E+E    +V + E+N   RDG   RVAIFRD
Sbjct: 168 IFSSPSSPTADDTVPQLPTDSKNLSSSKDENEECRISVVDPEKNVFVRDGMSSRVAIFRD 227

Query: 631 SEKDRSDPDYDRSYNRYVRNVPNTQNLNLAPFSMQTFHPSYLNYDPVMPQLRQLPSAQAS 452
            EKDR+DPDYDRSY RYVR++P  Q+ +L PF+MQ     Y+ YDP  PQL Q+P  QAS
Sbjct: 228 REKDRTDPDYDRSYERYVRSLPANQSFSLTPFNMQKIPIPYMQYDPSFPQLGQMPRTQAS 287

Query: 451 IGYR---NPVMNPLCAIGLNQTPCDSVYMQWPSQAVMYPQPYDQFRHAVFQAPFCQQPLS 281
           +GY    NP M+P CA+G NQT  D+ Y+QWPS A+MY   YDQFRHA FQAPFCQQPLS
Sbjct: 288 LGYHPAANPAMSPFCAMGSNQTSRDAAYVQWPSTAMMYAHSYDQFRHATFQAPFCQQPLS 347

Query: 280 FEYSQNY 260
           F+YSQN+
Sbjct: 348 FDYSQNH 354


>ref|XP_002307959.1| predicted protein [Populus trichocarpa] gi|222853935|gb|EEE91482.1|
           predicted protein [Populus trichocarpa]
          Length = 354

 Score =  202 bits (514), Expect = 8e-50
 Identities = 100/187 (53%), Positives = 132/187 (70%), Gaps = 4/187 (2%)
 Frame = -3

Query: 808 IFSAPNSPESEETVFRVQADVKTDHHPVVESEVTGHAVSELERNFSGRDG-GVRVAIFRD 632
           IFS+P+SP +E+TV  +  D K       E+E + ++V + E+N   RD    RVAIFRD
Sbjct: 168 IFSSPSSPTAEDTVPELPTDSKNLSSSKDENEESRNSVVDPEKNVFIRDSMSSRVAIFRD 227

Query: 631 SEKDRSDPDYDRSYNRYVRNVPNTQNLNLAPFSMQTFHPSYLNYDPVMPQLRQLPSAQAS 452
            EKDR+DPDYDRSY+RYVR++P  Q+ +L PF+MQ     ++ YD   PQ+ Q+P  QAS
Sbjct: 228 REKDRTDPDYDRSYDRYVRSLPANQSFSLTPFNMQKIPHPFMQYDAGFPQMGQMPRTQAS 287

Query: 451 IGYR---NPVMNPLCAIGLNQTPCDSVYMQWPSQAVMYPQPYDQFRHAVFQAPFCQQPLS 281
           +GY+    PVM+P CA+G NQT  D+ Y+QWPS A+MY   Y+QFRHA FQAPFCQQPLS
Sbjct: 288 LGYQPAAGPVMSPFCALGSNQTSRDAAYVQWPSAAMMYAHSYEQFRHAAFQAPFCQQPLS 347

Query: 280 FEYSQNY 260
           F+YSQN+
Sbjct: 348 FDYSQNH 354


>ref|XP_002521584.1| r3h domain containing protein, putative [Ricinus communis]
           gi|223539262|gb|EEF40855.1| r3h domain containing
           protein, putative [Ricinus communis]
          Length = 349

 Score =  197 bits (502), Expect = 2e-48
 Identities = 97/187 (51%), Positives = 130/187 (69%), Gaps = 4/187 (2%)
 Frame = -3

Query: 808 IFSAPNSPESEETVFRVQADVKTDHHPVVESEVTGHAVSELERNFSGRDGGV-RVAIFRD 632
           IFS+P+S   ++ V +   D K+ +    E E   ++ ++ E+N + RDG   RVAIFRD
Sbjct: 163 IFSSPSSTNLDDVVSQGSIDRKSTNPSKDELENCRYSANDPEKNINPRDGAPSRVAIFRD 222

Query: 631 SEKDRSDPDYDRSYNRYVRNVPNTQNLNLAPFSMQTFHPSYLNYDPVMPQLRQLPSAQAS 452
            EKDR+DPDYDRSY+RY+R++P  Q+ NLAP +MQ     ++ YD   PQL Q+P  Q S
Sbjct: 223 REKDRTDPDYDRSYDRYIRSLPTNQSFNLAPLNMQKIQLPFIPYDTGFPQLGQMPRTQNS 282

Query: 451 IGYR---NPVMNPLCAIGLNQTPCDSVYMQWPSQAVMYPQPYDQFRHAVFQAPFCQQPLS 281
           + Y+   +PVM+P CA+G NQT  D  Y+QWPS ++MY   Y+QFRHAVFQAPFCQQPLS
Sbjct: 283 LSYQPAASPVMSPFCAVGSNQTSRDPAYVQWPSASMMYAHSYEQFRHAVFQAPFCQQPLS 342

Query: 280 FEYSQNY 260
           FEYSQN+
Sbjct: 343 FEYSQNH 349


>ref|XP_004167787.1| PREDICTED: uncharacterized protein LOC101224356 [Cucumis sativus]
          Length = 354

 Score =  189 bits (481), Expect = 5e-46
 Identities = 96/187 (51%), Positives = 129/187 (68%), Gaps = 4/187 (2%)
 Frame = -3

Query: 808 IFSAPNSPESEETVFRVQADVKTDHHPVVESEVTGHAVSELERNFSGRDGGV-RVAIFRD 632
           IFS+P+SPE ++T+ ++ ++ K       E+E       ELE+ F+GRDG   RVAIF+D
Sbjct: 169 IFSSPSSPEIDDTISQIPSEGKYACSNRDETEGCRTLGGELEK-FNGRDGMTSRVAIFKD 227

Query: 631 SEKDRSDPDYDRSYNRYVRNVPNTQNLNLAPFSMQTFHPSYLNYDPVMPQLRQLPSAQAS 452
            EKDRSDPDYDR+Y+RY+RN+P  QNL+LAPF M    P ++ YD     +  +P  QAS
Sbjct: 228 REKDRSDPDYDRNYDRYIRNLPTNQNLSLAPFIMPKVQPPFVQYDSGYSLVGHMPGTQAS 287

Query: 451 IGYR---NPVMNPLCAIGLNQTPCDSVYMQWPSQAVMYPQPYDQFRHAVFQAPFCQQPLS 281
           + Y    +PV++P CA+GLNQ   D+ Y QW S A+MY   Y+QFRH+ FQAPFCQQPLS
Sbjct: 288 VNYGPHPSPVVSPFCAMGLNQASRDASYEQWQSAAMMYAHSYNQFRHSAFQAPFCQQPLS 347

Query: 280 FEYSQNY 260
           F+YSQN+
Sbjct: 348 FDYSQNH 354


Top