BLASTX nr result

ID: Bupleurum21_contig00006660 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00006660
         (531 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAD30073.1| arabinofuranosidase [Daucus carota]                    92   5e-17
emb|CBX25225.1| hypothetical_protein [Oryza brachyantha]               80   2e-13
gb|AFF58880.1| arabinoxylan arabinofuranohydrolase [Hordeum vulg...    77   2e-12
ref|XP_002442705.1| hypothetical protein SORBIDRAFT_08g001540 [S...    77   2e-12
gb|AAK21880.1|AF320325_1 arabinoxylan arabinofuranohydrolase iso...    77   2e-12

>dbj|BAD30073.1| arabinofuranosidase [Daucus carota]
          Length = 654

 Score = 92.0 bits (227), Expect = 5e-17
 Identities = 48/79 (60%), Positives = 59/79 (74%), Gaps = 4/79 (5%)
 Frame = +1

Query: 1   NFGSDQMSLNITIVGININPKSSKSTILTSNNVMDENSFDNPTKV----APVTAGVEVDG 168
           N GS  +S+ I+I G+ IN KS+ ST+LTS+NVMDENSFD P KV    AP+TA VE+DG
Sbjct: 575 NIGSVPVSMKISIDGVKINTKSALSTVLTSDNVMDENSFDKPAKVTPVRAPLTANVELDG 634

Query: 169 NDMVVTLTPHSLSSIDVLT 225
            +M  TL  HSL+SIDVLT
Sbjct: 635 TEMTFTLAQHSLTSIDVLT 653


>emb|CBX25225.1| hypothetical_protein [Oryza brachyantha]
          Length = 659

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 40/75 (53%), Positives = 51/75 (68%), Gaps = 2/75 (2%)
 Frame = +1

Query: 1   NFGSDQMSLNITIVGIN--INPKSSKSTILTSNNVMDENSFDNPTKVAPVTAGVEVDGND 174
           NFGSDQ+SL I++ G+   +N   S +T+LTS+NVMDENSF NP KV PV + +      
Sbjct: 574 NFGSDQVSLTISVTGLQARVNTVGSTATVLTSSNVMDENSFSNPNKVVPVKSQLANAAEQ 633

Query: 175 MVVTLTPHSLSSIDV 219
           M VTL PHS SS D+
Sbjct: 634 MKVTLAPHSFSSFDL 648


>gb|AFF58880.1| arabinoxylan arabinofuranohydrolase [Hordeum vulgare]
          Length = 656

 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 40/75 (53%), Positives = 51/75 (68%), Gaps = 2/75 (2%)
 Frame = +1

Query: 1   NFGSDQMSLNITIVGI--NINPKSSKSTILTSNNVMDENSFDNPTKVAPVTAGVEVDGND 174
           NFGSD +SL I++ G+  +IN   S +T+LTS+NV DENSF NPTKV PVT+ +      
Sbjct: 571 NFGSDTVSLTISVSGLQASINALGSNATVLTSSNVKDENSFSNPTKVVPVTSQLHNAAEQ 630

Query: 175 MVVTLTPHSLSSIDV 219
           M VTL  HS SS D+
Sbjct: 631 MQVTLAAHSFSSFDL 645


>ref|XP_002442705.1| hypothetical protein SORBIDRAFT_08g001540 [Sorghum bicolor]
           gi|241943398|gb|EES16543.1| hypothetical protein
           SORBIDRAFT_08g001540 [Sorghum bicolor]
          Length = 656

 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 39/75 (52%), Positives = 51/75 (68%), Gaps = 2/75 (2%)
 Frame = +1

Query: 1   NFGSDQMSLNITIVGI--NINPKSSKSTILTSNNVMDENSFDNPTKVAPVTAGVEVDGND 174
           NFGSD +SL I+  G+  ++N   S +T+LTS NVMDENSF NP KVAPV + +   G  
Sbjct: 571 NFGSDTVSLTISTSGLQASVNSLGSTATVLTSGNVMDENSFSNPNKVAPVKSQLSNAGEQ 630

Query: 175 MVVTLTPHSLSSIDV 219
           M VTL PHS ++ D+
Sbjct: 631 MQVTLAPHSFTTFDL 645


>gb|AAK21880.1|AF320325_1 arabinoxylan arabinofuranohydrolase isoenzyme AXAH-II [Hordeum
           vulgare]
          Length = 656

 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 40/75 (53%), Positives = 51/75 (68%), Gaps = 2/75 (2%)
 Frame = +1

Query: 1   NFGSDQMSLNITIVGI--NINPKSSKSTILTSNNVMDENSFDNPTKVAPVTAGVEVDGND 174
           NFGSD +SL I++ G+  +IN   S +T+LTS+NV DENSF NPTKV PVT+ +      
Sbjct: 571 NFGSDTVSLTISVSGLQASINALGSNATVLTSSNVKDENSFSNPTKVVPVTSQLHNAAEQ 630

Query: 175 MVVTLTPHSLSSIDV 219
           M VTL  HS SS D+
Sbjct: 631 MQVTLAAHSFSSFDL 645


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