BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00006645
         (1073 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_197165.1| hydroxyproline-rich glycoprotein family protein...    96   1e-38
ref|XP_002871727.1| hypothetical protein ARALYDRAFT_488521 [Arab...    96   1e-38
ref|XP_002282574.1| PREDICTED: protein TIC 40, chloroplastic [Vi...   133   9e-29
ref|XP_002305876.1| predicted protein [Populus trichocarpa] gi|2...   130   6e-28
ref|XP_002531917.1| conserved hypothetical protein [Ricinus comm...   125   1e-26

>ref|NP_197165.1| hydroxyproline-rich glycoprotein family protein [Arabidopsis
            thaliana] gi|75309208|sp|Q9FMD5.1|TIC40_ARATH RecName:
            Full=Protein TIC 40, chloroplastic; AltName: Full=Protein
            PIGMENT DEFECTIVE EMBRYO 120; AltName: Full=Translocon at
            the inner envelope membrane of chloroplasts 40;
            Short=AtTIC40; Flags: Precursor
            gi|16226313|gb|AAL16131.1|AF428299_1 AT5g16620/MTG13_6
            [Arabidopsis thaliana] gi|10176971|dbj|BAB10189.1|
            translocon Tic40-like protein [Arabidopsis thaliana]
            gi|20260222|gb|AAM13009.1| translocon Tic40-like protein
            [Arabidopsis thaliana] gi|30387547|gb|AAP31939.1|
            At5g16620 [Arabidopsis thaliana]
            gi|332004935|gb|AED92318.1| hydroxyproline-rich
            glycoprotein family protein [Arabidopsis thaliana]
          Length = 447

 Score = 95.9 bits (237), Expect(2) = 1e-38
 Identities = 42/53 (79%), Positives = 48/53 (90%)
 Frame = +2

Query: 914  NPTTFKWMLQNPQHRQQLQDMLNNMGGNTEWDNRMKDSLQNFDLSSPEVKQQF 1072
            NP TFKWML+NPQ+RQQLQDMLNNM G+ EWD RM D+L+NFDL+SPEVKQQF
Sbjct: 327  NPETFKWMLKNPQYRQQLQDMLNNMSGSGEWDKRMTDTLKNFDLNSPEVKQQF 379



 Score = 91.7 bits (226), Expect(2) = 1e-38
 Identities = 60/149 (40%), Positives = 75/149 (50%), Gaps = 18/149 (12%)
 Frame = +3

Query: 417 SREVTVDIPATQVEASPTT----------------TVNEDRELRPKSNKSAFVDVSPEET 548
           S   TVD+ AT+VE  P+T                 V E  + + +    AF D+SPEET
Sbjct: 184 SSGATVDVTATKVETPPSTKPKPTPAKDIEVDKPSVVLEASKEKKEEKNYAFEDISPEET 243

Query: 549 LQSNAXXXXXXXXXXXXXVDSQYQTQGFQNGAAFKPGSDASGGFSS--SKKADSVLSVEA 722
            + +               +++      QNGA    G+ AS  F S    K    LSVEA
Sbjct: 244 TKESPFSNYAEVSETNSPKETRLFEDVLQNGAGPANGATASEVFQSLGGGKGGPGLSVEA 303

Query: 723 LEKMMEDPMMQKMIYPYLPEEMRNPTTFK 809
           LEKMMEDP +QKM+YPYLPEEMRNP TFK
Sbjct: 304 LEKMMEDPTVQKMVYPYLPEEMRNPETFK 332


>ref|XP_002871727.1| hypothetical protein ARALYDRAFT_488521 [Arabidopsis lyrata subsp.
            lyrata] gi|297317564|gb|EFH47986.1| hypothetical protein
            ARALYDRAFT_488521 [Arabidopsis lyrata subsp. lyrata]
          Length = 447

 Score = 95.9 bits (237), Expect(2) = 1e-38
 Identities = 42/53 (79%), Positives = 48/53 (90%)
 Frame = +2

Query: 914  NPTTFKWMLQNPQHRQQLQDMLNNMGGNTEWDNRMKDSLQNFDLSSPEVKQQF 1072
            NP TFKWML+NPQ+RQQLQDMLNNM G+ EWD RM D+L+NFDL+SPEVKQQF
Sbjct: 327  NPETFKWMLKNPQYRQQLQDMLNNMSGSGEWDKRMTDTLKNFDLNSPEVKQQF 379



 Score = 91.3 bits (225), Expect(2) = 1e-38
 Identities = 59/149 (39%), Positives = 76/149 (51%), Gaps = 18/149 (12%)
 Frame = +3

Query: 417 SREVTVDIPATQVEASPTT----------------TVNEDRELRPKSNKSAFVDVSPEET 548
           S   TVD+ AT+V+  P+T                 V E  + + +    AF D+SPEET
Sbjct: 184 SSGATVDVTATKVDTPPSTKPKPTPAKDIEVDKPSVVLEASKEKKEEKNYAFEDISPEET 243

Query: 549 LQSNAXXXXXXXXXXXXXVDSQYQTQGFQNGAAFKPGSDASGGFSS--SKKADSVLSVEA 722
            + +               +++      QNGA    G+ AS  F S    K  + LSVEA
Sbjct: 244 TKESPFSNYAEVSETSSPKETRLFEDVLQNGAGPANGATASEVFQSLGGGKGGAGLSVEA 303

Query: 723 LEKMMEDPMMQKMIYPYLPEEMRNPTTFK 809
           LEKMMEDP +QKM+YPYLPEEMRNP TFK
Sbjct: 304 LEKMMEDPTVQKMVYPYLPEEMRNPETFK 332


>ref|XP_002282574.1| PREDICTED: protein TIC 40, chloroplastic [Vitis vinifera]
           gi|296089465|emb|CBI39284.3| unnamed protein product
           [Vitis vinifera]
          Length = 436

 Score =  133 bits (334), Expect = 9e-29
 Identities = 71/140 (50%), Positives = 86/140 (61%)
 Frame = +3

Query: 414 ASREVTVDIPATQVEASPTTTVNEDRELRPKSNKSAFVDVSPEETLQSNAXXXXXXXXXX 593
           A   VTVD+PAT+VE  P T V +D E + + NK AFVDVSPEETLQ +           
Sbjct: 188 AQSMVTVDVPATKVETPPATDVKDDIEKKNEQNKYAFVDVSPEETLQESPFENFEESTET 247

Query: 594 XXXVDSQYQTQGFQNGAAFKPGSDASGGFSSSKKADSVLSVEALEKMMEDPMMQKMIYPY 773
               D+Q+     QNG   +PG   S    S++ A+  LSV+ALEKMMEDP +QKM+YPY
Sbjct: 248 SSSKDAQFSAGVSQNGTPPRPGMGVSEDSQSTRNANPFLSVDALEKMMEDPTVQKMVYPY 307

Query: 774 LPEEMRNPTTFKCCYQLEPY 833
           LPEEMRNPTTFK   Q   Y
Sbjct: 308 LPEEMRNPTTFKWMLQNPQY 327



 Score =  105 bits (263), Expect = 1e-20
 Identities = 47/53 (88%), Positives = 50/53 (94%)
 Frame = +2

Query: 914  NPTTFKWMLQNPQHRQQLQDMLNNMGGNTEWDNRMKDSLQNFDLSSPEVKQQF 1072
            NPTTFKWMLQNPQ+RQQLQDMLNNMGG  EWDNRM D+L+NFDLSSPEVKQQF
Sbjct: 314  NPTTFKWMLQNPQYRQQLQDMLNNMGGGAEWDNRMMDNLKNFDLSSPEVKQQF 366


>ref|XP_002305876.1| predicted protein [Populus trichocarpa] gi|222848840|gb|EEE86387.1|
           predicted protein [Populus trichocarpa]
          Length = 429

 Score =  130 bits (327), Expect = 6e-28
 Identities = 73/144 (50%), Positives = 91/144 (63%), Gaps = 8/144 (5%)
 Frame = +3

Query: 426 VTVDIPATQVEASPTTTVN--------EDRELRPKSNKSAFVDVSPEETLQSNAXXXXXX 581
           +TVDIPAT+VEA+PTT V         E+R+++ ++ K AFVD+SPEET  +        
Sbjct: 182 ITVDIPATKVEAAPTTDVGKEKETDFLEERKIKEETKKYAFVDISPEETSLNTPFSSVED 241

Query: 582 XXXXXXXVDSQYQTQGFQNGAAFKPGSDASGGFSSSKKADSVLSVEALEKMMEDPMMQKM 761
                   D ++  + FQNGAAFK G  A+ G  S++     LSVEALEKMMEDP MQKM
Sbjct: 242 DNETSSSKDVEFAKKVFQNGAAFKQGPGAAEGSQSTRP---FLSVEALEKMMEDPTMQKM 298

Query: 762 IYPYLPEEMRNPTTFKCCYQLEPY 833
           +YPYLPEEMRNPTTFK   Q   Y
Sbjct: 299 VYPYLPEEMRNPTTFKWMLQNPQY 322



 Score = 94.4 bits (233), Expect = 4e-17
 Identities = 41/53 (77%), Positives = 50/53 (94%)
 Frame = +2

Query: 914  NPTTFKWMLQNPQHRQQLQDMLNNMGGNTEWDNRMKDSLQNFDLSSPEVKQQF 1072
            NPTTFKWMLQNPQ+RQQL+DMLNNMGG+ +WD++M DSL++FDL+S EVKQQF
Sbjct: 309  NPTTFKWMLQNPQYRQQLEDMLNNMGGSGKWDSQMMDSLKDFDLNSAEVKQQF 361


>ref|XP_002531917.1| conserved hypothetical protein [Ricinus communis]
           gi|223528427|gb|EEF30461.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 465

 Score =  125 bits (315), Expect = 1e-26
 Identities = 67/144 (46%), Positives = 88/144 (61%)
 Frame = +3

Query: 426 VTVDIPATQVEASPTTTVNEDRELRPKSNKSAFVDVSPEETLQSNAXXXXXXXXXXXXXV 605
           VTVD+ AT+VEA+  T   ++ E+  +  K AFVDVSPEET   +               
Sbjct: 223 VTVDVSATKVEAASVTDAKDEAEITKEPKKYAFVDVSPEETFPKSPFKSNEDILETSTSK 282

Query: 606 DSQYQTQGFQNGAAFKPGSDASGGFSSSKKADSVLSVEALEKMMEDPMMQKMIYPYLPEE 785
           D+Q+  +  QNGAA   G+    G  S++KA S LSVEALEKMMEDP +QKM+YPYLPEE
Sbjct: 283 DTQFNPEVLQNGAASNQGAADFTGSQSTRKAGSGLSVEALEKMMEDPTVQKMVYPYLPEE 342

Query: 786 MRNPTTFKCCYQLEPYIASIPKLI 857
           MRNP+TFK   Q   Y   + +++
Sbjct: 343 MRNPSTFKWMLQNPQYRQQLEEML 366



 Score = 99.8 bits (247), Expect = 1e-18
 Identities = 44/53 (83%), Positives = 49/53 (92%)
 Frame = +2

Query: 914  NPTTFKWMLQNPQHRQQLQDMLNNMGGNTEWDNRMKDSLQNFDLSSPEVKQQF 1072
            NP+TFKWMLQNPQ+RQQL++MLNNM G  EWDNRM DSL+NFDLSSPEVKQQF
Sbjct: 345  NPSTFKWMLQNPQYRQQLEEMLNNMSGTGEWDNRMMDSLKNFDLSSPEVKQQF 397