BLASTX nr result

ID: Bupleurum21_contig00006627 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00006627
         (1598 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278609.1| PREDICTED: geranylgeranyl transferase type-1...   526   e-147
ref|XP_002312088.1| predicted protein [Populus trichocarpa] gi|2...   518   e-144
gb|AAP50511.1| geranylgeranyltransferase type I beta subunit [Ca...   508   e-141
ref|XP_002532295.1| geranylgeranyl transferase type I beta subun...   496   e-138
ref|XP_004142747.1| PREDICTED: geranylgeranyl transferase type-1...   479   e-133

>ref|XP_002278609.1| PREDICTED: geranylgeranyl transferase type-1 subunit beta [Vitis
            vinifera] gi|296086228|emb|CBI31669.3| unnamed protein
            product [Vitis vinifera]
          Length = 351

 Score =  526 bits (1355), Expect = e-147
 Identities = 250/331 (75%), Positives = 286/331 (86%)
 Frame = -3

Query: 1440 FDRDRHIYYLEMMYHLLPTQYEGQEINRLTLAYFVISGLDLLNALDRIDKEAVIRWVLSL 1261
            FDR++H+ +L+MM  LLP+ Y+GQEINRLTLAYF ISGL +L ALD +DKE V  WVLSL
Sbjct: 11   FDREKHVVFLQMMNQLLPSDYQGQEINRLTLAYFAISGLHILGALDEVDKEEVSSWVLSL 70

Query: 1260 QAHSRSETDLDSGQFFGFHGSRSSQFETNDNGAFIPNGSHLASTYCALAILRTVGYNLSL 1081
            QAH R+E +L++GQFFGFHGSRSSQF  +D G  I NGSHLASTYCALAIL+ VGYN S 
Sbjct: 71   QAHPRNEAELNNGQFFGFHGSRSSQFPRDDKGVLIHNGSHLASTYCALAILKIVGYNFSC 130

Query: 1080 MDSISILKSIKNLQQPNGSFMPTHIGAETDLRFVYCAAAICFMLEDWNGMDREKAKEYVL 901
            ++S SIL S++NLQQP+GSFMPTH+GAETDLRFV+CAAAIC MLE+W+GMD+EKAKEY+L
Sbjct: 131  INSKSILTSMRNLQQPDGSFMPTHVGAETDLRFVFCAAAICSMLENWSGMDKEKAKEYIL 190

Query: 900  SCQSYDGGFGLVPSSESHGGATYCALASLLLMGFFEDDLISKSASSSIIDVPLLLHWCLQ 721
            +CQSYDGGFGL+P SESHGG TYCA+ASL LMGF E D++SKS+SSSII+VPLLL W LQ
Sbjct: 191  NCQSYDGGFGLIPGSESHGGGTYCAVASLQLMGFIEHDILSKSSSSSIINVPLLLDWSLQ 250

Query: 720  RQAVDGGFQGRANKDSDTCYAFWVGGVLRILGAQKLFDEKALRDFLLTCQSQYGGFSKFP 541
            RQA DGGFQGRANK SDTCYAFWVGGVLRILG  KL D+KAL  FLLTCQSQYGGFSKFP
Sbjct: 251  RQAADGGFQGRANKASDTCYAFWVGGVLRILGGYKLIDKKALHGFLLTCQSQYGGFSKFP 310

Query: 540  NQLPDLYHSYYGITAFSLLNEPRLNPICVAL 448
             QLPDLYHSYYG +AFS+L EP L PICV L
Sbjct: 311  GQLPDLYHSYYGFSAFSMLEEPGLIPICVEL 341


>ref|XP_002312088.1| predicted protein [Populus trichocarpa] gi|222851908|gb|EEE89455.1|
            predicted protein [Populus trichocarpa]
          Length = 372

 Score =  518 bits (1335), Expect = e-144
 Identities = 245/336 (72%), Positives = 285/336 (84%)
 Frame = -3

Query: 1455 NSDLKFDRDRHIYYLEMMYHLLPTQYEGQEINRLTLAYFVISGLDLLNALDRIDKEAVIR 1276
            +S L FD++RH+ +LEMMY +LP  Y+ QEIN LTLAYFVISGLD+L +LDR+DK+AV  
Sbjct: 27   SSSLTFDKERHVAFLEMMYFMLPCHYQSQEINHLTLAYFVISGLDILGSLDRVDKDAVAA 86

Query: 1275 WVLSLQAHSRSETDLDSGQFFGFHGSRSSQFETNDNGAFIPNGSHLASTYCALAILRTVG 1096
            WVLSLQ++   + +L+SGQF+GF GSRSSQF ++++G  I N SHLASTYCAL+IL+TVG
Sbjct: 87   WVLSLQSNPGDKAELNSGQFYGFCGSRSSQFSSDNDGILIQNHSHLASTYCALSILKTVG 146

Query: 1095 YNLSLMDSISILKSIKNLQQPNGSFMPTHIGAETDLRFVYCAAAICFMLEDWNGMDREKA 916
            YNLS +DS  I  SI+NLQQP+GSF+P HIGAETDLRF+YCAAAICFMLEDW+GMDREK 
Sbjct: 147  YNLSNIDSKLISMSIRNLQQPDGSFLPIHIGAETDLRFIYCAAAICFMLEDWSGMDREKT 206

Query: 915  KEYVLSCQSYDGGFGLVPSSESHGGATYCALASLLLMGFFEDDLISKSASSSIIDVPLLL 736
            KEY+  CQSYDGGFG++P SESHGG TYCA+ASL LMGF EDD++SKSA+SSIID+PLLL
Sbjct: 207  KEYIFKCQSYDGGFGMIPGSESHGGGTYCAVASLCLMGFIEDDVLSKSAASSIIDIPLLL 266

Query: 735  HWCLQRQAVDGGFQGRANKDSDTCYAFWVGGVLRILGAQKLFDEKALRDFLLTCQSQYGG 556
             WCLQRQA DGGFQGRANK SDTCYAFWVG VLRILG  KL D  ALR FLLTCQS+YGG
Sbjct: 267  EWCLQRQAADGGFQGRANKPSDTCYAFWVGAVLRILGGSKLIDGTALRGFLLTCQSEYGG 326

Query: 555  FSKFPNQLPDLYHSYYGITAFSLLNEPRLNPICVAL 448
            FSKFPN+LPDLYHSYYG TA SLL EP LN + V L
Sbjct: 327  FSKFPNELPDLYHSYYGYTALSLLEEPGLNALSVEL 362


>gb|AAP50511.1| geranylgeranyltransferase type I beta subunit [Catharanthus roseus]
          Length = 359

 Score =  508 bits (1307), Expect = e-141
 Identities = 243/338 (71%), Positives = 284/338 (84%), Gaps = 1/338 (0%)
 Frame = -3

Query: 1458 SNSDLKF-DRDRHIYYLEMMYHLLPTQYEGQEINRLTLAYFVISGLDLLNALDRIDKEAV 1282
            S+S+L+F DRDRH+ +LEMMY LLP++Y+ QEIN +TLA+F I GLD+L ALDRIDK+ V
Sbjct: 10   SDSELQFFDRDRHVQFLEMMYDLLPSRYQSQEINHITLAHFAIVGLDILGALDRIDKQEV 69

Query: 1281 IRWVLSLQAHSRSETDLDSGQFFGFHGSRSSQFETNDNGAFIPNGSHLASTYCALAILRT 1102
            I WVLSLQAH ++  +LD+GQF+GFHGSRSSQF++ND G  +PN SHLAS+YCAL ILRT
Sbjct: 70   INWVLSLQAHPKNADELDNGQFYGFHGSRSSQFQSNDEGDTVPNVSHLASSYCALTILRT 129

Query: 1101 VGYNLSLMDSISILKSIKNLQQPNGSFMPTHIGAETDLRFVYCAAAICFMLEDWNGMDRE 922
            VGY+ SL++S  IL+S+KNLQQ +GSFMP H GAETDLRFVYCAAAICFM  +W GMDR 
Sbjct: 130  VGYDFSLLNSKLILESMKNLQQQDGSFMPIHSGAETDLRFVYCAAAICFMFGNWGGMDRA 189

Query: 921  KAKEYVLSCQSYDGGFGLVPSSESHGGATYCALASLLLMGFFEDDLISKSASSSIIDVPL 742
            KAKEY+LSCQSYDGGFGL+P SESHGGATYCA+ASL LMGF E+DL+SK+ S  IIDVP+
Sbjct: 190  KAKEYILSCQSYDGGFGLIPGSESHGGATYCAVASLRLMGFIEEDLLSKTMSPCIIDVPM 249

Query: 741  LLHWCLQRQAVDGGFQGRANKDSDTCYAFWVGGVLRILGAQKLFDEKALRDFLLTCQSQY 562
            LL W LQRQ  DGGFQGR NK +DTCYAFWVGGVL+ILGA K  ++  LR FLL+CQSQY
Sbjct: 250  LLEWSLQRQGDDGGFQGRRNKPTDTCYAFWVGGVLKILGAHKYINDSGLRGFLLSCQSQY 309

Query: 561  GGFSKFPNQLPDLYHSYYGITAFSLLNEPRLNPICVAL 448
            GGFSKFP QLPDLYH+YYG  AFSLL EP L PI V L
Sbjct: 310  GGFSKFPGQLPDLYHTYYGFCAFSLLEEPDLKPIHVEL 347


>ref|XP_002532295.1| geranylgeranyl transferase type I beta subunit, putative [Ricinus
            communis] gi|223527997|gb|EEF30079.1| geranylgeranyl
            transferase type I beta subunit, putative [Ricinus
            communis]
          Length = 370

 Score =  496 bits (1277), Expect = e-138
 Identities = 235/331 (70%), Positives = 273/331 (82%)
 Frame = -3

Query: 1440 FDRDRHIYYLEMMYHLLPTQYEGQEINRLTLAYFVISGLDLLNALDRIDKEAVIRWVLSL 1261
            F+R+ HI YLEMMY +LP  Y+ QEINRLTLAYF ISGL +LNALDR+DK+AV  WVLS 
Sbjct: 30   FNREHHIAYLEMMYQMLPNYYQSQEINRLTLAYFTISGLHILNALDRVDKDAVASWVLSF 89

Query: 1260 QAHSRSETDLDSGQFFGFHGSRSSQFETNDNGAFIPNGSHLASTYCALAILRTVGYNLSL 1081
            QAH   ++ L++GQF+GF GSRSSQF    NG  +   SHLAS+Y ALAIL+ VGYNLS 
Sbjct: 90   QAHPEDKSQLNNGQFYGFQGSRSSQFPLACNGVSVHTLSHLASSYSALAILKIVGYNLSN 149

Query: 1080 MDSISILKSIKNLQQPNGSFMPTHIGAETDLRFVYCAAAICFMLEDWNGMDREKAKEYVL 901
            +DS SIL S++NLQQP+GSF+P HIGAETDLRF+YCAAAICFMLEDW+GMD+E+AKEY++
Sbjct: 150  LDSKSILTSMRNLQQPDGSFLPIHIGAETDLRFIYCAAAICFMLEDWSGMDKEQAKEYIV 209

Query: 900  SCQSYDGGFGLVPSSESHGGATYCALASLLLMGFFEDDLISKSASSSIIDVPLLLHWCLQ 721
             CQSYDGGFG+V  SESHGG T+CA+ASL LMGF +DDL+SK    SIIDVPLLL WCL+
Sbjct: 210  RCQSYDGGFGMVSGSESHGGGTFCAVASLRLMGFIDDDLLSKDEPPSIIDVPLLLEWCLK 269

Query: 720  RQAVDGGFQGRANKDSDTCYAFWVGGVLRILGAQKLFDEKALRDFLLTCQSQYGGFSKFP 541
            RQA DGGFQGR NK +DTCYAFWVG VLRILG  K  D KALR FL+TCQS+YGGFSKFP
Sbjct: 270  RQAADGGFQGRLNKPTDTCYAFWVGAVLRILGGYKFIDGKALRGFLITCQSKYGGFSKFP 329

Query: 540  NQLPDLYHSYYGITAFSLLNEPRLNPICVAL 448
             +LPD+YHSYYG TAFSLL EP LN +CV L
Sbjct: 330  GELPDIYHSYYGYTAFSLLEEPGLNSLCVEL 360


>ref|XP_004142747.1| PREDICTED: geranylgeranyl transferase type-1 subunit beta-like
            [Cucumis sativus] gi|449483868|ref|XP_004156717.1|
            PREDICTED: geranylgeranyl transferase type-1 subunit
            beta-like [Cucumis sativus]
          Length = 363

 Score =  479 bits (1234), Expect = e-133
 Identities = 232/350 (66%), Positives = 277/350 (79%)
 Frame = -3

Query: 1497 STIVEMSLSFWKASNSDLKFDRDRHIYYLEMMYHLLPTQYEGQEINRLTLAYFVISGLDL 1318
            ST++E S S    S+S   FDRDRH+ +LEMMY LLP QY+ QEIN LTLAYFVISGLDL
Sbjct: 5    STLLEDS-STPSPSSSSSGFDRDRHVMFLEMMYQLLPFQYQTQEINHLTLAYFVISGLDL 63

Query: 1317 LNALDRIDKEAVIRWVLSLQAHSRSETDLDSGQFFGFHGSRSSQFETNDNGAFIPNGSHL 1138
            L A+DR+DK+ +  WVLS QA   ++ +  +G+ +GF GSRSSQF  ++NG  I NGSHL
Sbjct: 64   LGAMDRVDKDKIANWVLSFQALPTNKAEKTTGELYGFCGSRSSQFPPDENGDLIHNGSHL 123

Query: 1137 ASTYCALAILRTVGYNLSLMDSISILKSIKNLQQPNGSFMPTHIGAETDLRFVYCAAAIC 958
            ASTYCAL IL+ +GY+ S ++S SI  S++NLQQ +GSF+P HIGAE DLRFVYCAAAIC
Sbjct: 124  ASTYCALVILKVIGYDFSNINSESIAISMRNLQQSDGSFVPIHIGAEADLRFVYCAAAIC 183

Query: 957  FMLEDWNGMDREKAKEYVLSCQSYDGGFGLVPSSESHGGATYCALASLLLMGFFEDDLIS 778
            +MLE+W+GMDR+K K Y+L+CQSYDGGFGL P SESHGG TYCA+ASL LMGF EDD +S
Sbjct: 184  YMLENWSGMDRQKTKTYILNCQSYDGGFGLTPGSESHGGGTYCAIASLRLMGFIEDDPLS 243

Query: 777  KSASSSIIDVPLLLHWCLQRQAVDGGFQGRANKDSDTCYAFWVGGVLRILGAQKLFDEKA 598
            +   SSII+VPLLL WCLQ+QA DGGFQGR NK +DTCYAFW+G  LRILG   L D+KA
Sbjct: 244  RDNPSSIINVPLLLEWCLQKQAADGGFQGRPNKPADTCYAFWIGSTLRILGGLDLIDKKA 303

Query: 597  LRDFLLTCQSQYGGFSKFPNQLPDLYHSYYGITAFSLLNEPRLNPICVAL 448
            L+ FLLTCQS+YGGFSKFP   PDLYHSYYG TAFSLL EP +N + V L
Sbjct: 304  LKAFLLTCQSKYGGFSKFPMDFPDLYHSYYGFTAFSLLEEPDINSLFVEL 353


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