BLASTX nr result

ID: Bupleurum21_contig00006604 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00006604
         (398 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAF46352.1| alpha chain of nascent polypeptide associated co...   103   9e-38
gb|ACB32231.1| nascent polypeptide associated complex alpha [Sol...   103   9e-38
gb|ABK93224.1| unknown [Populus trichocarpa]                           99   2e-37
gb|ABK92784.1| unknown [Populus trichocarpa]                           99   2e-37
ref|XP_002303961.1| predicted protein [Populus trichocarpa] gi|2...    99   2e-37

>dbj|BAF46352.1| alpha chain of nascent polypeptide associated complex [Nicotiana
           benthamiana]
          Length = 201

 Score =  103 bits (258), Expect(2) = 9e-38
 Identities = 53/68 (77%), Positives = 57/68 (83%)
 Frame = -3

Query: 393 VSRVSIKKSKNILFVISKPDVFKSPNSDTYVIFGEAKIEDXXXXXXXXXAEQFKAPNLSH 214
           VSRV++KKSKNILFVISKPDVFKSPNSDTYVIFGEAKIED         AEQFKAPNLS+
Sbjct: 81  VSRVTVKKSKNILFVISKPDVFKSPNSDTYVIFGEAKIEDLSSQLQTQAAEQFKAPNLSN 140

Query: 213 AMPKPEPS 190
            + KPEPS
Sbjct: 141 VISKPEPS 148



 Score = 78.2 bits (191), Expect(2) = 9e-38
 Identities = 38/41 (92%), Positives = 41/41 (100%)
 Frame = -1

Query: 125 QDDEEVDETGVEPKDIELVMTQAGVSRSKAVKALKAADGDI 3
           QDDE+VD+TGVEPKDIELVMTQAGVSR+KAVKALKAADGDI
Sbjct: 152 QDDEDVDDTGVEPKDIELVMTQAGVSRAKAVKALKAADGDI 192


>gb|ACB32231.1| nascent polypeptide associated complex alpha [Solanum chacoense]
          Length = 199

 Score =  103 bits (258), Expect(2) = 9e-38
 Identities = 53/68 (77%), Positives = 57/68 (83%)
 Frame = -3

Query: 393 VSRVSIKKSKNILFVISKPDVFKSPNSDTYVIFGEAKIEDXXXXXXXXXAEQFKAPNLSH 214
           VSRV++KKSKNILFVISKPDVFKSPNSDTYVIFGEAKIED         AEQFKAPNLS+
Sbjct: 79  VSRVTVKKSKNILFVISKPDVFKSPNSDTYVIFGEAKIEDLSSQLQSQAAEQFKAPNLSN 138

Query: 213 AMPKPEPS 190
            + KPEPS
Sbjct: 139 VISKPEPS 146



 Score = 78.2 bits (191), Expect(2) = 9e-38
 Identities = 38/41 (92%), Positives = 41/41 (100%)
 Frame = -1

Query: 125 QDDEEVDETGVEPKDIELVMTQAGVSRSKAVKALKAADGDI 3
           QDDE+VDETGVEPKDIELVMTQAGVSR+KAVKAL+AADGDI
Sbjct: 150 QDDEDVDETGVEPKDIELVMTQAGVSRAKAVKALRAADGDI 190


>gb|ABK93224.1| unknown [Populus trichocarpa]
          Length = 205

 Score = 99.4 bits (246), Expect(2) = 2e-37
 Identities = 51/68 (75%), Positives = 55/68 (80%)
 Frame = -3

Query: 393 VSRVSIKKSKNILFVISKPDVFKSPNSDTYVIFGEAKIEDXXXXXXXXXAEQFKAPNLSH 214
           VSRV++KKSKNILFVISKPDVFKSP SDTYVIFGEAKIED         AEQFKAP+LSH
Sbjct: 85  VSRVTVKKSKNILFVISKPDVFKSPTSDTYVIFGEAKIEDLSSQLQTQAAEQFKAPDLSH 144

Query: 213 AMPKPEPS 190
            + KPE S
Sbjct: 145 VISKPETS 152



 Score = 81.6 bits (200), Expect(2) = 2e-37
 Identities = 41/41 (100%), Positives = 41/41 (100%)
 Frame = -1

Query: 125 QDDEEVDETGVEPKDIELVMTQAGVSRSKAVKALKAADGDI 3
           QDDEEVDETGVEPKDIELVMTQAGVSRSKAVKALKAADGDI
Sbjct: 156 QDDEEVDETGVEPKDIELVMTQAGVSRSKAVKALKAADGDI 196


>gb|ABK92784.1| unknown [Populus trichocarpa]
          Length = 204

 Score = 99.4 bits (246), Expect(2) = 2e-37
 Identities = 51/68 (75%), Positives = 55/68 (80%)
 Frame = -3

Query: 393 VSRVSIKKSKNILFVISKPDVFKSPNSDTYVIFGEAKIEDXXXXXXXXXAEQFKAPNLSH 214
           VSRV++KKSKNILFVISKPDVFKSP SDTYVIFGEAKIED         AEQFKAP+LSH
Sbjct: 84  VSRVTVKKSKNILFVISKPDVFKSPTSDTYVIFGEAKIEDLSSQLQTQAAEQFKAPDLSH 143

Query: 213 AMPKPEPS 190
            + KPE S
Sbjct: 144 VISKPETS 151



 Score = 81.6 bits (200), Expect(2) = 2e-37
 Identities = 41/41 (100%), Positives = 41/41 (100%)
 Frame = -1

Query: 125 QDDEEVDETGVEPKDIELVMTQAGVSRSKAVKALKAADGDI 3
           QDDEEVDETGVEPKDIELVMTQAGVSRSKAVKALKAADGDI
Sbjct: 155 QDDEEVDETGVEPKDIELVMTQAGVSRSKAVKALKAADGDI 195


>ref|XP_002303961.1| predicted protein [Populus trichocarpa] gi|222841393|gb|EEE78940.1|
           predicted protein [Populus trichocarpa]
          Length = 126

 Score = 99.4 bits (246), Expect(2) = 2e-37
 Identities = 51/68 (75%), Positives = 55/68 (80%)
 Frame = -3

Query: 393 VSRVSIKKSKNILFVISKPDVFKSPNSDTYVIFGEAKIEDXXXXXXXXXAEQFKAPNLSH 214
           VSRV++KKSKNILFVISKPDVFKSP SDTYVIFGEAKIED         AEQFKAP+LSH
Sbjct: 7   VSRVTVKKSKNILFVISKPDVFKSPTSDTYVIFGEAKIEDLSSQLQTQAAEQFKAPDLSH 66

Query: 213 AMPKPEPS 190
            + KPE S
Sbjct: 67  VISKPETS 74



 Score = 81.6 bits (200), Expect(2) = 2e-37
 Identities = 41/41 (100%), Positives = 41/41 (100%)
 Frame = -1

Query: 125 QDDEEVDETGVEPKDIELVMTQAGVSRSKAVKALKAADGDI 3
           QDDEEVDETGVEPKDIELVMTQAGVSRSKAVKALKAADGDI
Sbjct: 78  QDDEEVDETGVEPKDIELVMTQAGVSRSKAVKALKAADGDI 118


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