BLASTX nr result

ID: Bupleurum21_contig00006591 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00006591
         (975 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002981542.1| hypothetical protein SELMODRAFT_178975 [Sela...   357   e-113
gb|AFV46219.1| hypothetical protein, partial [Scutellaria baical...   352   e-113
ref|XP_002517492.1| tubulin alpha chain, putative [Ricinus commu...   357   e-113
ref|XP_002964078.1| hypothetical protein SELMODRAFT_405729 [Sela...   356   e-113
gb|AAK81858.1|AF394915_1 alpha tubulin subunit [Rosa hybrid cult...   356   e-113

>ref|XP_002981542.1| hypothetical protein SELMODRAFT_178975 [Selaginella moellendorffii]
           gi|300150708|gb|EFJ17357.1| hypothetical protein
           SELMODRAFT_178975 [Selaginella moellendorffii]
          Length = 449

 Score =  357 bits (917), Expect(2) = e-113
 Identities = 188/245 (76%), Positives = 193/245 (78%)
 Frame = +2

Query: 239 KHVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCX 418
           KHVPRA+FVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLC 
Sbjct: 60  KHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCL 119

Query: 419 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVFHAVXXXXXXXXXXXXXXXXXVDYG 598
                                            LVFHAV                 VDYG
Sbjct: 120 DRIRKLADNCTGLQGF-----------------LVFHAVGGGTGSGLGSLLLERLSVDYG 162

Query: 599 KKSKLGFTVYPSPQISTSVVEPYNSVLSTHSLLEHTDVSVLLDNEAIYDICRRSLDIERP 778
           KKSKLGFTVYPSPQ+STSVVEPYNSVLSTHSLLEHTDV+VLLDNEAIYDICRRSLDIERP
Sbjct: 163 KKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERP 222

Query: 779 SYTNLNRLVSQVISSLTTSLRFDGALNVDMTEFQTNLVPYPRIHFMLSSYAPVISAEKAY 958
           +YTNLNRLVSQVISSLT SLRFDGALNVD+TEFQTNLVPYPRIHFMLSSYAPVISAEKAY
Sbjct: 223 TYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAY 282

Query: 959 HEQLS 973
           HEQLS
Sbjct: 283 HEQLS 287



 Score = 78.2 bits (191), Expect(2) = e-113
 Identities = 33/34 (97%), Positives = 34/34 (100%)
 Frame = +1

Query: 31  MRECISIHIGQAGIQVGNSCWELYCLEHGIQPDG 132
           MRECISIHIGQAGIQVGN+CWELYCLEHGIQPDG
Sbjct: 1   MRECISIHIGQAGIQVGNACWELYCLEHGIQPDG 34


>gb|AFV46219.1| hypothetical protein, partial [Scutellaria baicalensis]
          Length = 440

 Score =  352 bits (904), Expect(2) = e-113
 Identities = 183/245 (74%), Positives = 192/245 (78%)
 Frame = +2

Query: 239 KHVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCX 418
           KHVPRA+FVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLC 
Sbjct: 97  KHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCL 156

Query: 419 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVFHAVXXXXXXXXXXXXXXXXXVDYG 598
                                            LVFHAV                 VDYG
Sbjct: 157 DRIRKLADNCTGLQGF-----------------LVFHAVGGGTGSGLGSLLLERLSVDYG 199

Query: 599 KKSKLGFTVYPSPQISTSVVEPYNSVLSTHSLLEHTDVSVLLDNEAIYDICRRSLDIERP 778
           KKSKLGFT+YPSPQ+ST+VVEPYNSVLSTHSLLEHTDV+VLLDNEAIYDICR+SLDIERP
Sbjct: 200 KKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRKSLDIERP 259

Query: 779 SYTNLNRLVSQVISSLTTSLRFDGALNVDMTEFQTNLVPYPRIHFMLSSYAPVISAEKAY 958
           +YTNLNRL+SQVISSLT SLRFDGALNVD+ EFQTNLVPYPRIHFMLSSYAPVISAEKAY
Sbjct: 260 TYTNLNRLISQVISSLTASLRFDGALNVDVNEFQTNLVPYPRIHFMLSSYAPVISAEKAY 319

Query: 959 HEQLS 973
           HEQLS
Sbjct: 320 HEQLS 324



 Score = 82.8 bits (203), Expect(2) = e-113
 Identities = 35/39 (89%), Positives = 38/39 (97%)
 Frame = +1

Query: 16  KNTRKMRECISIHIGQAGIQVGNSCWELYCLEHGIQPDG 132
           KN+ KMRECISIHIG+AGIQVGN+CWELYCLEHGIQPDG
Sbjct: 33  KNSAKMRECISIHIGRAGIQVGNACWELYCLEHGIQPDG 71


>ref|XP_002517492.1| tubulin alpha chain, putative [Ricinus communis]
           gi|223543503|gb|EEF45034.1| tubulin alpha chain,
           putative [Ricinus communis]
          Length = 450

 Score =  357 bits (915), Expect(2) = e-113
 Identities = 186/245 (75%), Positives = 193/245 (78%)
 Frame = +2

Query: 239 KHVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCX 418
           KHVPRA+F+DLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLC 
Sbjct: 60  KHVPRAVFLDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCL 119

Query: 419 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVFHAVXXXXXXXXXXXXXXXXXVDYG 598
                                            LVFHAV                 VDYG
Sbjct: 120 DRIRKLADNCTGLQGF-----------------LVFHAVGGGTGSGLGSLLLERLSVDYG 162

Query: 599 KKSKLGFTVYPSPQISTSVVEPYNSVLSTHSLLEHTDVSVLLDNEAIYDICRRSLDIERP 778
           KKSKLGFTVYPSPQ+STSVVEPYNSVLSTHSLLEHTDVS+LLDNEAIYDICRRSLDIERP
Sbjct: 163 KKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNEAIYDICRRSLDIERP 222

Query: 779 SYTNLNRLVSQVISSLTTSLRFDGALNVDMTEFQTNLVPYPRIHFMLSSYAPVISAEKAY 958
           +YTNLNRL+SQVISSLT SLRFDGALNVD+TEFQTNLVPYPRIHFMLSSYAPVISAEKAY
Sbjct: 223 TYTNLNRLISQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAY 282

Query: 959 HEQLS 973
           HEQLS
Sbjct: 283 HEQLS 287



 Score = 78.2 bits (191), Expect(2) = e-113
 Identities = 33/34 (97%), Positives = 34/34 (100%)
 Frame = +1

Query: 31  MRECISIHIGQAGIQVGNSCWELYCLEHGIQPDG 132
           MRECISIHIGQAGIQVGN+CWELYCLEHGIQPDG
Sbjct: 1   MRECISIHIGQAGIQVGNACWELYCLEHGIQPDG 34


>ref|XP_002964078.1| hypothetical protein SELMODRAFT_405729 [Selaginella moellendorffii]
           gi|302787344|ref|XP_002975442.1| hypothetical protein
           SELMODRAFT_232506 [Selaginella moellendorffii]
           gi|300157016|gb|EFJ23643.1| hypothetical protein
           SELMODRAFT_232506 [Selaginella moellendorffii]
           gi|300167807|gb|EFJ34411.1| hypothetical protein
           SELMODRAFT_405729 [Selaginella moellendorffii]
          Length = 451

 Score =  356 bits (914), Expect(2) = e-113
 Identities = 187/245 (76%), Positives = 193/245 (78%)
 Frame = +2

Query: 239 KHVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCX 418
           KHVPRA+F+DLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLC 
Sbjct: 60  KHVPRAVFLDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCL 119

Query: 419 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVFHAVXXXXXXXXXXXXXXXXXVDYG 598
                                            LVFHAV                 VDYG
Sbjct: 120 DRIRKLADNCTGLQGF-----------------LVFHAVGGGTGSGLGSLLLERLSVDYG 162

Query: 599 KKSKLGFTVYPSPQISTSVVEPYNSVLSTHSLLEHTDVSVLLDNEAIYDICRRSLDIERP 778
           KKSKLGFTVYPSPQ+STSVVEPYNSVLSTHSLLEHTDV+VLLDNEAIYDICRRSLDIERP
Sbjct: 163 KKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERP 222

Query: 779 SYTNLNRLVSQVISSLTTSLRFDGALNVDMTEFQTNLVPYPRIHFMLSSYAPVISAEKAY 958
           +YTNLNRLVSQVISSLT SLRFDGALNVD+TEFQTNLVPYPRIHFMLSSYAPVISAEKAY
Sbjct: 223 TYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAY 282

Query: 959 HEQLS 973
           HEQLS
Sbjct: 283 HEQLS 287



 Score = 78.2 bits (191), Expect(2) = e-113
 Identities = 33/34 (97%), Positives = 34/34 (100%)
 Frame = +1

Query: 31  MRECISIHIGQAGIQVGNSCWELYCLEHGIQPDG 132
           MRECISIHIGQAGIQVGN+CWELYCLEHGIQPDG
Sbjct: 1   MRECISIHIGQAGIQVGNACWELYCLEHGIQPDG 34


>gb|AAK81858.1|AF394915_1 alpha tubulin subunit [Rosa hybrid cultivar]
          Length = 451

 Score =  356 bits (914), Expect(2) = e-113
 Identities = 189/245 (77%), Positives = 193/245 (78%)
 Frame = +2

Query: 239 KHVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCX 418
           KHVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLC 
Sbjct: 60  KHVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCL 119

Query: 419 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVFHAVXXXXXXXXXXXXXXXXXVDYG 598
                                            LVF+AV                 VDYG
Sbjct: 120 DRIRKLADNCTGLQGF-----------------LVFNAVGGGTGSGLGSLLLERLSVDYG 162

Query: 599 KKSKLGFTVYPSPQISTSVVEPYNSVLSTHSLLEHTDVSVLLDNEAIYDICRRSLDIERP 778
           KKSKLGFTVYPSPQ+STSVVEPYNSVLSTHSLLEHTDVSVLLDNEAIYDICRRSLDIERP
Sbjct: 163 KKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSVLLDNEAIYDICRRSLDIERP 222

Query: 779 SYTNLNRLVSQVISSLTTSLRFDGALNVDMTEFQTNLVPYPRIHFMLSSYAPVISAEKAY 958
           +YTNLNRLVSQVISSLT SLRFDGALNVD+TEFQTNLVPYPRIHFMLSSYAPVISAEKAY
Sbjct: 223 TYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAY 282

Query: 959 HEQLS 973
           HEQLS
Sbjct: 283 HEQLS 287



 Score = 78.2 bits (191), Expect(2) = e-113
 Identities = 33/34 (97%), Positives = 34/34 (100%)
 Frame = +1

Query: 31  MRECISIHIGQAGIQVGNSCWELYCLEHGIQPDG 132
           MRECISIHIGQAGIQVGN+CWELYCLEHGIQPDG
Sbjct: 1   MRECISIHIGQAGIQVGNACWELYCLEHGIQPDG 34


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