BLASTX nr result

ID: Bupleurum21_contig00006584 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00006584
         (588 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003594196.1| hypothetical protein MTR_2g025490 [Medicago ...   148   6e-34
gb|AFK46569.1| unknown [Medicago truncatula]                          146   2e-33
ref|XP_003534788.1| PREDICTED: uncharacterized protein LOC100801...   143   2e-32
ref|XP_002518401.1| conserved hypothetical protein [Ricinus comm...   142   5e-32
ref|XP_002331577.1| predicted protein [Populus trichocarpa] gi|1...   139   5e-31

>ref|XP_003594196.1| hypothetical protein MTR_2g025490 [Medicago truncatula]
           gi|87162690|gb|ABD28485.1| hypothetical protein
           MtrDRAFT_AC148915g3v2 [Medicago truncatula]
           gi|355483244|gb|AES64447.1| hypothetical protein
           MTR_2g025490 [Medicago truncatula]
          Length = 208

 Score =  148 bits (374), Expect = 6e-34
 Identities = 89/182 (48%), Positives = 106/182 (58%), Gaps = 18/182 (9%)
 Frame = +3

Query: 96  MEGVGARLGRSSTRYGGPATVFTGPVRKWKKKWVHVTPGISSSDQYRNSA-------ING 254
           MEGVGARLGRSSTRYG PATVFTGPVRKWKKKWVHV P  SSS+   N+A        NG
Sbjct: 1   MEGVGARLGRSSTRYG-PATVFTGPVRKWKKKWVHVLPSSSSSNSNNNNANQNHANGSNG 59

Query: 255 NVNGTHLKVYKWTPIQRXXXXXXXXXXXXL----TPETEEPPRRKFKYVPI------XXX 404
           N NG+HL ++KWTPI +            +        EEPPRRKFKYVP+         
Sbjct: 60  N-NGSHLLLFKWTPITQSQNNANGNGNGSVKDAAVEPVEEPPRRKFKYVPVAVLEEQKNE 118

Query: 405 XXXXXXXXXXXXXXXPSETDVVATDLNSKPDCIDEKPDMNDVPMEENQ-EPSNPLGRQDL 581
                          P E D  A +  SK + +DEKPD+NDVPMEE++ +  N + RQDL
Sbjct: 119 ATEDEVAEKVEDESNPIEADSSAAEPTSKNETLDEKPDINDVPMEESEPQDKNQVVRQDL 178

Query: 582 NK 587
           N+
Sbjct: 179 NE 180


>gb|AFK46569.1| unknown [Medicago truncatula]
          Length = 208

 Score =  146 bits (369), Expect = 2e-33
 Identities = 88/182 (48%), Positives = 105/182 (57%), Gaps = 18/182 (9%)
 Frame = +3

Query: 96  MEGVGARLGRSSTRYGGPATVFTGPVRKWKKKWVHVTPGISSSDQYRNSA-------ING 254
           MEGVGARLGRSSTRYG PATVFTGPVRKWKKKWVHV P   SS+   N+A        NG
Sbjct: 1   MEGVGARLGRSSTRYG-PATVFTGPVRKWKKKWVHVLPSSPSSNSNNNNANQNHANGSNG 59

Query: 255 NVNGTHLKVYKWTPIQRXXXXXXXXXXXXL----TPETEEPPRRKFKYVPI------XXX 404
           N NG+HL ++KWTPI +            +        EEPPRRKFKYVP+         
Sbjct: 60  N-NGSHLLLFKWTPITQSQNNANGNGNGSVKDAAVEPVEEPPRRKFKYVPVAVLEEQKNE 118

Query: 405 XXXXXXXXXXXXXXXPSETDVVATDLNSKPDCIDEKPDMNDVPMEENQ-EPSNPLGRQDL 581
                          P E D  A +  SK + +DEKPD+NDVPMEE++ +  N + RQDL
Sbjct: 119 ATEDEVAEKVEDESNPIEADSSAAEPTSKNETLDEKPDINDVPMEESEPQDKNQVVRQDL 178

Query: 582 NK 587
           N+
Sbjct: 179 NE 180


>ref|XP_003534788.1| PREDICTED: uncharacterized protein LOC100801458 [Glycine max]
          Length = 202

 Score =  143 bits (361), Expect = 2e-32
 Identities = 82/174 (47%), Positives = 101/174 (58%), Gaps = 10/174 (5%)
 Frame = +3

Query: 96  MEGVGARLGRSSTRYGGPATVFTGPVRKWKKKWVHVTPGISSSDQYRNSAINGNVNGTHL 275
           MEGVGARLGRSSTRYG PATVFTGPVRKWKKKW+HV+P  +SS+   N+  N   + +HL
Sbjct: 1   MEGVGARLGRSSTRYG-PATVFTGPVRKWKKKWIHVSPSSASSNSNANNHHNHASHASHL 59

Query: 276 KVYKWTPI---QRXXXXXXXXXXXXLTPETEEPPRRKFKYVPI------XXXXXXXXXXX 428
            +YKWTP+   Q                  EEPPRRKFKYVP+                 
Sbjct: 60  LLYKWTPLTHSQNTATTNNANAKDSPPEPPEEPPRRKFKYVPVALLEEQKNEGAESEGTE 119

Query: 429 XXXXXXXPSETDVVATDLNSKPDCIDEKPDMNDVPMEENQ-EPSNPLGRQDLNK 587
                  P + D  A +   K + +DEKPD+NDVPMEE+Q +  N + RQDLN+
Sbjct: 120 KVDEESKPIDADSGAAEATHKNETLDEKPDINDVPMEESQSQYKNQVVRQDLNE 173


>ref|XP_002518401.1| conserved hypothetical protein [Ricinus communis]
           gi|223542246|gb|EEF43788.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 208

 Score =  142 bits (357), Expect = 5e-32
 Identities = 82/176 (46%), Positives = 101/176 (57%), Gaps = 12/176 (6%)
 Frame = +3

Query: 96  MEGVGARLGRSSTRYGGPATVFTGPVRKWKKKWVHVTPGI----SSSDQYRNSAINGNVN 263
           MEGVGARLGRSSTRYG PATVF+GPVRKWKK+WVHV+P      S +  + NS+ NGN N
Sbjct: 1   MEGVGARLGRSSTRYG-PATVFSGPVRKWKKRWVHVSPSSNHNHSHNHNHNNSSSNGN-N 58

Query: 264 GTHLKVYKWTPIQRXXXXXXXXXXXXLTPET-------EEPPRRKFKYVPIXXXXXXXXX 422
           G+HL +YKWTP  +               +        +EPPRRKFKY+P+         
Sbjct: 59  GSHLLLYKWTPSSQSQSQSQSNNNSNSNHKNDDPPLLPDEPPRRKFKYIPVYLLEKQKNE 118

Query: 423 XXXXXXXXXPSETDVVATDLNSKPDCIDEKPDMNDVPMEENQ-EPSNPLGRQDLNK 587
                          VA +  SK D  DEKPD+ND+PMEE Q +  N + RQDLN+
Sbjct: 119 VAEKAEDEAKQSDAEVAAEPISKDDGFDEKPDINDIPMEETQSQGDNQVVRQDLNE 174


>ref|XP_002331577.1| predicted protein [Populus trichocarpa] gi|118487372|gb|ABK95514.1|
           unknown [Populus trichocarpa]
           gi|222873801|gb|EEF10932.1| predicted protein [Populus
           trichocarpa]
          Length = 211

 Score =  139 bits (349), Expect = 5e-31
 Identities = 91/203 (44%), Positives = 107/203 (52%), Gaps = 39/203 (19%)
 Frame = +3

Query: 96  MEGVGARLGRSSTRYGGPATVFTGPVRKWKKKWVHVTP-------------------GIS 218
           MEGVGARLGRSSTRYG PATVF+GPVRKWKK+WVHV P                     S
Sbjct: 1   MEGVGARLGRSSTRYG-PATVFSGPVRKWKKRWVHVNPSSNHNSFHSHHHNATTNAAAAS 59

Query: 219 SSDQYRNSAINGNVNGTHLKVYKWTPIQR-----XXXXXXXXXXXXLTPE---------T 356
           SS    +S+ NGN NG+HL +YKWT + +                  T E         T
Sbjct: 60  SSAANHSSSSNGN-NGSHLLLYKWTALSQSNGSSSTTNHFNGNNINTTNEIANLSNGDVT 118

Query: 357 EEPPRRKFKYVPI------XXXXXXXXXXXXXXXXXXPSETDVVATDLNSKPDCIDEKPD 518
           EEPPRRKFKY+P+                        PS+TD  A +  SK D  DEKPD
Sbjct: 119 EEPPRRKFKYIPVDLLEKQKKEAEEQEASEKFDDESKPSDTDPNAAEPVSKSDSADEKPD 178

Query: 519 MNDVPMEENQEPSNPLGRQDLNK 587
           +NDVPMEENQ+  N + RQDLN+
Sbjct: 179 INDVPMEENQD-GNQVVRQDLNE 200


Top