BLASTX nr result

ID: Bupleurum21_contig00006577 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00006577
         (1172 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAB39942.1| putative protein [Arabidopsis thaliana] gi|72678...   101   3e-19
dbj|BAD95408.1| hypothetical protein [Arabidopsis thaliana]            97   8e-18
gb|AAD32866.1|AC005489_4 F14N23.4 [Arabidopsis thaliana]               97   1e-17
gb|AAC63678.1| putative non-LTR retroelement reverse transcripta...    96   2e-17
ref|XP_004148188.1| PREDICTED: uncharacterized protein LOC101204...    93   1e-16

>emb|CAB39942.1| putative protein [Arabidopsis thaliana] gi|7267871|emb|CAB78214.1|
            putative protein [Arabidopsis thaliana]
          Length = 473

 Score =  101 bits (252), Expect = 3e-19
 Identities = 78/289 (26%), Positives = 126/289 (43%), Gaps = 22/289 (7%)
 Frame = +3

Query: 63   RKIMNCRSSALDYIRYHVGRNSGFSFWFDPWADIPLVQRFGMEIISIAESDAGDKAGS-- 236
            RKI+  R  A    +  +   +  SFW+D W+D+      G  I S  +  A D   +  
Sbjct: 180  RKILKFRDIARTLCKVEINNGARTSFWYDDWSDL------GRLIDSAGDRGAIDLGINKH 233

Query: 237  FMVNNTWGNIP-----SNHYLAIELRHLLQGISIG-LEDRIDWEGM--KYTNISSISHS- 389
              V   WGN       +N    +E R +L   S    EDR  W+G   ++ +I S   + 
Sbjct: 234  ATVVEAWGNRRRRRHRTNFLNRVEERLILSWNSRNQAEDRALWKGKENRFRSIFSTKDTW 293

Query: 390  --LRPSTAPCLWSHAIWNSWMIKKCSFVSWLSLKDRLLTKERMVRFGINVEPNCFLCNSS 563
              +R  +    W   +W +  I K +F  WL++ +RL T +RM  + + V+  C LCN +
Sbjct: 294  NHIRTVSNKVAWYKGVWFAQAIPKHAFCMWLAVHNRLSTGDRMTLWNMGVDATCILCNKA 353

Query: 564  IETASHLFAYCPFTAQVMSASPFALMG-----NWNEYLNGNFTNEVNYCQRQLCHLFFTI 728
            +E+  HLF  CPF  ++       +       +W   +N    N  +     L      +
Sbjct: 354  LESRDHLFFSCPFATEIWEPLAKTIYNTCFYTDWQTIINNVSRNWPDRIAGFLARCILQV 413

Query: 729  AVHTIWKERNHRAH---ENSRQKCTSAIVAEIKN-IMRLKLSSCSEFKK 863
             ++T+W+ERN R H    NS  +  S I   I+N +M +K S    F +
Sbjct: 414  TIYTLWRERNERKHGASPNSSSRLISWIDKHIRNHLMAIKQSGDRRFDR 462


>dbj|BAD95408.1| hypothetical protein [Arabidopsis thaliana]
          Length = 478

 Score = 97.1 bits (240), Expect = 8e-18
 Identities = 76/285 (26%), Positives = 127/285 (44%), Gaps = 24/285 (8%)
 Frame = +3

Query: 63   RKIMNCRSSALDYIRYHVGRNSGFSFWFDPWADI-PLVQRFGMEIISIAESDAGDKAGSF 239
            +KI+  R+ A  ++++ +   S  SFWFD W+ I  L+   G         D G    + 
Sbjct: 186  KKILKHRALASGFVKHDIHNGSNTSFWFDNWSKIGRLIDVTGHR----GCIDMGITLHAS 241

Query: 240  MVNNTWGNIPSNHY---------LAIELRHLLQGISIGLEDRIDWEG-----MKYTNISS 377
            +      + P  H          +  E+RH  QG++ G ED + W+G         N   
Sbjct: 242  VAEAVVNHRPRRHRHDTLLRIEDVIAEVRH--QGLTSG-EDTVRWKGNGDIFKPCFNTKE 298

Query: 378  ISHSLRPSTAPCLWSHAIWNSWMIKKCSFVSWLSLKDRLLTKERMVRFGINVEPNCFLCN 557
               + R       W   +W S    K S ++W+++K+RL T +RM+ +    + +C LC+
Sbjct: 299  TWAATREPKLKVNWYKGVWFSHATPKYSVLAWIAIKNRLTTGDRMLSWNAGADSSCVLCH 358

Query: 558  SSIETASHLFAYCPFTAQVMSASPFALM-----GNWNEYL----NGNFTNEVNYCQRQLC 710
              +ET  HLF  CP++A+V S     L+       W   L    N +  +EV +  R   
Sbjct: 359  HLVETRDHLFFTCPYSAEVWSTLTRKLLSQHFTNRWEAILKLLTNKSLGHEVPFLTRYT- 417

Query: 711  HLFFTIAVHTIWKERNHRAHENSRQKCTSAIVAEIKNIMRLKLSS 845
               F + +H++WKERN R H    Q   + +V  +   +R ++SS
Sbjct: 418  ---FQLTLHSLWKERNGRRHGEVPQ-AAAQMVRFLDKQVRNRISS 458


>gb|AAD32866.1|AC005489_4 F14N23.4 [Arabidopsis thaliana]
          Length = 1161

 Score = 96.7 bits (239), Expect = 1e-17
 Identities = 79/287 (27%), Positives = 129/287 (44%), Gaps = 17/287 (5%)
 Frame = +3

Query: 63   RKIMNCRSSALDYIRYHVGRNSGFSFWFDPWADI-PLVQRFGMEIISIAESDAGDKAGSF 239
            RK+   R  A  +I   VG     SFW D W D  PL+   G     +A           
Sbjct: 856  RKLCKLRPFARPFIICEVGSGVTASFWHDNWTDHGPLLHLTGPAGPLLAGLPLNSVVRDA 915

Query: 240  MVNNTW--GNIPSNHYLAIELRHLLQG----ISIGLEDRIDWE------GMKYTNISSIS 383
            + ++TW   +  S + +   L+ +L      I    +D   W+        +++   + S
Sbjct: 916  LRDDTWRISSSRSRNPVITLLQRVLPSAASLIDCPHDDTYLWKIGHHAPSNRFSTADTWS 975

Query: 384  HSLRPSTAPCLWSHAIWNSWMIKKCSFVSWLSLKDRLLTKERMVRFGINVEPNCFLCNSS 563
            + L+PS+   LW  A+W    + K +F+ W+   +RL T++R+ R+G ++ P C LCN  
Sbjct: 976  Y-LQPSSTSVLWHKAVWFKDHVPKQAFICWVVAHNRLHTRDRLRRWGFSIPPTCVLCNDL 1034

Query: 564  IETASHLFAYCPFTAQVMSASPFALMGN----WNEYLNGNFTNEVNYCQRQLCHLFFTIA 731
             E+  HLF  C F++++ S    AL  N    +   L    T   +     +  L F  +
Sbjct: 1035 DESREHLFFRCQFSSEIWSFFMRALNLNPPPQFMHCLLWTLTASRDRNITLITKLLFHAS 1094

Query: 732  VHTIWKERNHRAHENSRQKCTSAIVAEIKNIMRLKLSSCSEFKKAAS 872
            V+ IW+ERN R H NS  +    I+ EI+ I+R +L   S   +  S
Sbjct: 1095 VYFIWRERNLRIHSNS-VRPAHLIIKEIQLIVRARLDPLSRSSRVVS 1140


>gb|AAC63678.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1216

 Score = 95.9 bits (237), Expect = 2e-17
 Identities = 69/279 (24%), Positives = 127/279 (45%), Gaps = 18/279 (6%)
 Frame = +3

Query: 63   RKIMNCRSSALDYIRYHVGRNSGFSFWFDPWADI-PLVQRFGMEIISIAESDAGDKAGSF 239
            R+++  R  A  + +  V      SFWFD W++  PL+   G         D G      
Sbjct: 652  RRLLKHREVAKSFCKIEVNNGVNTSFWFDNWSEKGPLINLTGAR----GAIDMGISRHMT 707

Query: 240  MVNNTWGNIPSNHYLAI--ELRHLL----QGISIGLEDRIDWEGM------KYTNISSIS 383
            +           H + I  E   +L    Q  +I LED I W G       +++   + +
Sbjct: 708  LAEAWSRRRRKRHRVEILNEFEEILLQKYQHRNIELEDAILWRGKEDVFKARFSTKDTWN 767

Query: 384  HSLRPSTAPCLWSHAIWNSWMIKKCSFVSWLSLKDRLLTKERMVRFGINVEPNCFLCNSS 563
            H +R S+    W   +W +    K SF +WL++++RL T +RM+ +       C  C+S 
Sbjct: 768  H-IRTSSNQRAWHKGVWFAHATPKFSFCAWLAIRNRLSTGDRMMTWNNGTPTTCVFCSSP 826

Query: 564  IETASHLFAYCPFTAQVMSASPFALMGN-----WNEYLNGNFTNEVNYCQRQLCHLFFTI 728
            +ET  HLF  C +++++ ++    +  +     W+  +N    ++ +  Q  L    F +
Sbjct: 827  METRDHLFFQCCYSSEIWTSIAKNVYKDRFSTKWSAVVNYISDSQPDRIQSFLSRYTFQV 886

Query: 729  AVHTIWKERNHRAHENSRQKCTSAIVAEIKNIMRLKLSS 845
            ++H+IW+ERN R H   + +  S ++ +I   +R +LS+
Sbjct: 887  SIHSIWRERNSRRH-GEKSRSASNLIRQIDKTIRNQLST 924


>ref|XP_004148188.1| PREDICTED: uncharacterized protein LOC101204314 [Cucumis sativus]
          Length = 282

 Score = 92.8 bits (229), Expect = 1e-16
 Identities = 64/240 (26%), Positives = 119/240 (49%), Gaps = 10/240 (4%)
 Frame = +3

Query: 165 PLVQRFGMEIISIAESDAGDKAGSFMVNNTWGNIPSNHYLAIELRHLLQGISIG--LEDR 338
           P++Q+FG  +I  A S    +   FM  +     P  +   +++   +QG+ +   +EDR
Sbjct: 38  PIIQQFGERVIYDAGSRWDARLVDFMGRDGDWRWPLVYLDLMDIWDRVQGVRLSPSVEDR 97

Query: 339 IDWEGMKYTNISSIS--HSLRPSTAPCLWSHAIWNSWMIKKCSFVSWLSLKDRLLTKERM 512
             W    + + S  S   ++RP ++   WS  +W    I K SF +WL+++DRL T+ R+
Sbjct: 98  WVWVPGSHDSFSITSAWETIRPHSSRVGWSGLLWGGGNIPKHSFCAWLAIRDRLGTRGRL 157

Query: 513 VRFGINVEPNCFLCNSSIETASHLFAYCPFTAQVMS-----ASPFALMGNWNEYLNGNFT 677
            R+  ++  +C LC  + E+  HLF  C F  ++ S      S     G W   L+  + 
Sbjct: 158 SRWDRSIPLSCLLCGGNYESRDHLFFSCHFGWEIWSRILLLKSSSHRTGYWGVELSWIYN 217

Query: 678 NEV-NYCQRQLCHLFFTIAVHTIWKERNHRAHENSRQKCTSAIVAEIKNIMRLKLSSCSE 854
             +    +R+L  L +   ++ IW+ERNHR H  S ++    +   I++ ++++ +S S+
Sbjct: 218 QGIGKSVRRKLWRLLWCATIYFIWQERNHRLHGGSIRE-PLVVFQLIRSCIKVRAASWSD 276


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