BLASTX nr result

ID: Bupleurum21_contig00006575 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00006575
         (1068 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20378.3| unnamed protein product [Vitis vinifera]              109   1e-21
ref|XP_002281734.1| PREDICTED: uncharacterized protein LOC100247...   109   1e-21
ref|XP_002330422.1| predicted protein [Populus trichocarpa] gi|2...    70   9e-10

>emb|CBI20378.3| unnamed protein product [Vitis vinifera]
          Length = 455

 Score =  109 bits (273), Expect = 1e-21
 Identities = 108/353 (30%), Positives = 158/353 (44%), Gaps = 14/353 (3%)
 Frame = +2

Query: 2    YHQCSSRKLISAFS-RGEFSTNFVSEIHEXXXXXXXXXXXXXXRGKHYKSREWAHNSCTF 178
            +HQ SS +L SAFS   E S N   ++H               RGKHY+SR W   +  F
Sbjct: 46   FHQFSSHQLKSAFSGSSEGSENLDFDLH-GPSSPKLPSSVSRSRGKHYRSRNWGKENGGF 104

Query: 179  T-TKKHSVKTISSKLSQVTSGDVKKIKHQLGDEILNKCGLLPAGVDCEKTVNEAAGSSTS 355
            +  K+H VK++S K S V SG  ++IK +        CG L     C    +    SS++
Sbjct: 105  SLNKQHPVKSLSGKTSWVDSGSSQEIKPK------PSCGNLKG--TCSSKTSLGCDSSST 156

Query: 356  RMN--------TSFCYSKTDSGLTPSREGEKNS-ISTVTSEST-EQNEKSYEVSRQTKGQ 505
            R +        +SF  SK        +  E NS  STVT E T +Q +KS EVS    G 
Sbjct: 157  RTSIPNYTIPISSFGDSKGRLSSVAIKASESNSTTSTVTFEGTHQQPQKSLEVSSGPFGH 216

Query: 506  XXXXXXXXXXXXXXXCVTRPAARMDINRVRKXXXXXXXXXXXXXXXXXXXXXXXNNMTPR 685
                           C TR A+R++IN+ ++                        + T  
Sbjct: 217  TSGLLSVMRITLRKSCATRQASRVEINKCQQSEGCKSSAGKSSVGSSSNPGYDVKDRTAT 276

Query: 686  GMQHNDTTPFSGNAIGISQVPKNILKGPSILKASPVL-RYVTSISGQKIESDVHKSVNQE 862
             +++ D TP S N +  SQ   N  +  +  KAS +L  Y T+ S ++ +  V KS  ++
Sbjct: 277  EIRNRDRTPDSRNVMRTSQTAVNRGRASTTSKASNILVDYRTNNSRKEGKRIVAKSTTKD 336

Query: 863  TSKAKVRNFLVHPQVSLPLRMQKQDRL-IASRAKGKVQVSEQYKRFTGAGKEN 1018
              K+KV    ++ +  +PLR+ +QD L  A++AK KV V     R  G GKEN
Sbjct: 337  AVKSKVVCQTINRKGLVPLRVNEQDPLTAATKAKSKVGVGAS-NRLAGGGKEN 388


>ref|XP_002281734.1| PREDICTED: uncharacterized protein LOC100247040 [Vitis vinifera]
          Length = 445

 Score =  109 bits (273), Expect = 1e-21
 Identities = 108/353 (30%), Positives = 158/353 (44%), Gaps = 14/353 (3%)
 Frame = +2

Query: 2    YHQCSSRKLISAFS-RGEFSTNFVSEIHEXXXXXXXXXXXXXXRGKHYKSREWAHNSCTF 178
            +HQ SS +L SAFS   E S N   ++H               RGKHY+SR W   +  F
Sbjct: 36   FHQFSSHQLKSAFSGSSEGSENLDFDLH-GPSSPKLPSSVSRSRGKHYRSRNWGKENGGF 94

Query: 179  T-TKKHSVKTISSKLSQVTSGDVKKIKHQLGDEILNKCGLLPAGVDCEKTVNEAAGSSTS 355
            +  K+H VK++S K S V SG  ++IK +        CG L     C    +    SS++
Sbjct: 95   SLNKQHPVKSLSGKTSWVDSGSSQEIKPK------PSCGNLKG--TCSSKTSLGCDSSST 146

Query: 356  RMN--------TSFCYSKTDSGLTPSREGEKNS-ISTVTSEST-EQNEKSYEVSRQTKGQ 505
            R +        +SF  SK        +  E NS  STVT E T +Q +KS EVS    G 
Sbjct: 147  RTSIPNYTIPISSFGDSKGRLSSVAIKASESNSTTSTVTFEGTHQQPQKSLEVSSGPFGH 206

Query: 506  XXXXXXXXXXXXXXXCVTRPAARMDINRVRKXXXXXXXXXXXXXXXXXXXXXXXNNMTPR 685
                           C TR A+R++IN+ ++                        + T  
Sbjct: 207  TSGLLSVMRITLRKSCATRQASRVEINKCQQSEGCKSSAGKSSVGSSSNPGYDVKDRTAT 266

Query: 686  GMQHNDTTPFSGNAIGISQVPKNILKGPSILKASPVL-RYVTSISGQKIESDVHKSVNQE 862
             +++ D TP S N +  SQ   N  +  +  KAS +L  Y T+ S ++ +  V KS  ++
Sbjct: 267  EIRNRDRTPDSRNVMRTSQTAVNRGRASTTSKASNILVDYRTNNSRKEGKRIVAKSTTKD 326

Query: 863  TSKAKVRNFLVHPQVSLPLRMQKQDRL-IASRAKGKVQVSEQYKRFTGAGKEN 1018
              K+KV    ++ +  +PLR+ +QD L  A++AK KV V     R  G GKEN
Sbjct: 327  AVKSKVVCQTINRKGLVPLRVNEQDPLTAATKAKSKVGVGAS-NRLAGGGKEN 378


>ref|XP_002330422.1| predicted protein [Populus trichocarpa] gi|222871807|gb|EEF08938.1|
            predicted protein [Populus trichocarpa]
          Length = 490

 Score = 70.1 bits (170), Expect = 9e-10
 Identities = 92/368 (25%), Positives = 148/368 (40%), Gaps = 19/368 (5%)
 Frame = +2

Query: 2    YHQCSSRKLISAFS-------------RGEFSTNFVSEIHEXXXXXXXXXXXXXXRGKHY 142
            +HQCSS +L +AF+             +G FS N  S +                RGKHY
Sbjct: 47   FHQCSSGQLKAAFAYSGEKSTSSDFECKGSFSPNIPSSVSRS-------------RGKHY 93

Query: 143  KSREWAHNSCTFT-TKKHSVKTISSKLSQVTSGDVKKIKHQLGDEILNKCGLLPAGVDCE 319
             S++W       +  K+H VK + SK S+V S    KIK +L   ++N  G   + V   
Sbjct: 94   ASKKWGGGGHDISMNKQHPVKVL-SKSSRVNSEPNDKIKPKL--SLVNSKGTSRSKVSVV 150

Query: 320  KTVNEAAGSSTSRMNTSFCYSKTDSGLTP--SREGEKNSISTVTSESTEQ-NEKSYEVSR 490
               +    +  + +    C   T+S L     +  E N+ STVTSE   Q  +++ EVS 
Sbjct: 151  SGKSFTRNAKETDLEAKSCQGGTESSLNSLVFKAAESNT-STVTSERDHQAKQRNLEVSS 209

Query: 491  QTKGQXXXXXXXXXXXXXXXCVTRPAARMDINRVRKXXXXXXXXXXXXXXXXXXXXXXXN 670
            +                    VTR A+R++IN   K                        
Sbjct: 210  RGFDHASGLLSAVRNGLRKSFVTRKASRVEINDENKQLRDRKSSSSKSSWGSSSNPGYDA 269

Query: 671  NMTPRGMQHNDTTPFSGNAIGISQVPKNILKGPSILKASPVLRYVTSISGQKIE-SDVHK 847
              +   +   + TP S N   +++  +   K   + +AS V       + +K   S+V K
Sbjct: 270  KSST--LAFKEQTPDSRNVARMTEAARKKTKDSDMSRASDVRVKEKVFNSRKGGISNVAK 327

Query: 848  SVNQETSKAKVRNFLVHPQVSLPLRMQKQDRLI-ASRAKGKVQVSEQYKRFTGAGKENMA 1024
            S + E  K+KV+N  +  +     R  +   L   ++AK KV+V     +  G GKEN+ 
Sbjct: 328  SASLEALKSKVQNQTLRVKALADHRGNELHPLPGTAKAKEKVRVG-GINKLVGPGKENVT 386

Query: 1025 EQTTKSVN 1048
             + + S+N
Sbjct: 387  GKASLSLN 394


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