BLASTX nr result

ID: Bupleurum21_contig00006568 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00006568
         (1572 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADA57640.1| dehydroquinate dehydratase [Solanum tuberosum]         673   0.0  
ref|NP_001234051.1| dehydroquinate dehydratase/shikimate:NADP ox...   662   0.0  
emb|CBI26126.3| unnamed protein product [Vitis vinifera]              654   0.0  
ref|XP_002277395.2| PREDICTED: bifunctional 3-dehydroquinate deh...   649   0.0  
ref|XP_002314474.1| dehydroquinate dehydratase/ shikimate dehydr...   644   0.0  

>gb|ADA57640.1| dehydroquinate dehydratase [Solanum tuberosum]
          Length = 526

 Score =  673 bits (1737), Expect = 0.0
 Identities = 337/463 (72%), Positives = 374/463 (80%)
 Frame = +3

Query: 3    PVEDVQSLIKQCPLPTLFSYRPTWEGGQYDGDEKSRLNVLLYVMESGADYIDVELKAVEE 182
            P  D+ +LIKQCPLPTLF+YRPTWEGGQY GDE SRL+ L   ME GADYIDVELKA++E
Sbjct: 63   PRPDIDALIKQCPLPTLFTYRPTWEGGQYAGDEMSRLDALRLAMELGADYIDVELKAIDE 122

Query: 183  FNNLMRGKKPAKCKVIVSSHNYQYTPSAEDLGNLVAASIASGADIVKISTTALDITDVAR 362
            FNN + G K AKCK+IVSSHNY+ TPSAEDLGNLVA   ASGADIVK +TTA DITDVAR
Sbjct: 123  FNNALHGNKSAKCKLIVSSHNYESTPSAEDLGNLVARIQASGADIVKFATTAQDITDVAR 182

Query: 363  VFQITVNSQAPIIAMVMGERGLMSRILCPKFGGYLTFGALDSGIVSAPGQPTIADLLNFY 542
            VFQITV+SQ PIIAMVMGE+GLMSRILCPKFGGYLTFG L+ G VSAPGQPT+ DLLN Y
Sbjct: 183  VFQITVHSQVPIIAMVMGEKGLMSRILCPKFGGYLTFGTLEMGKVSAPGQPTVEDLLNLY 242

Query: 543  NFRQIGPDTKIFGIIGKPVSHSKSPLLYNEGFKKVGFNGIYVHLLVDDVAKFFQTYSSAD 722
            NFRQ+GPDTKIFGIIGKPVSHSK PLLYNE F+ VGFNG+++HLLVDD+A FF+TYSS D
Sbjct: 243  NFRQLGPDTKIFGIIGKPVSHSKPPLLYNESFRSVGFNGVFMHLLVDDIANFFRTYSSLD 302

Query: 723  FSGFSCTIPHKESALKCCDEVDSVAKSIGAVNCIIRRNNGKLFGCNTDYVGAISAIEDXX 902
            F+GFSCTIPHKE+AL CC E+D  AK+IGAVNCIIRR +GKLFGCNTDY+GAISAIE+  
Sbjct: 303  FAGFSCTIPHKEAALDCCAEIDPTAKAIGAVNCIIRRPDGKLFGCNTDYIGAISAIEE-- 360

Query: 903  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVVIANRTYERAKELADTIG 1082
                                                    RVVIANRTYERA+ELA  +G
Sbjct: 361  GLQGSQPSISGSPLAGKLFVVIGAGGAGKAIAYGAKEKGARVVIANRTYERARELAIVVG 420

Query: 1083 AQALSLSELNNFQPENHMLLANTTSIGMQPNIDDTPISKEALKAYELVFDAIYTPKITRL 1262
            A+ALSL EL+NF PEN M+LANTTSIGMQP +DDTPISKEALK Y LVFDA+YTPKITRL
Sbjct: 421  AEALSLDELSNFHPENDMILANTTSIGMQPKVDDTPISKEALKHYPLVFDAVYTPKITRL 480

Query: 1263 LREADECGAKIVSGVEMFIGQAYEQYERFTGLPAPKELFKKVM 1391
            LREA E GAKIV+GVEMFIGQAYEQYERFTGLPAPKELFK +M
Sbjct: 481  LREAQESGAKIVTGVEMFIGQAYEQYERFTGLPAPKELFKNIM 523


>ref|NP_001234051.1| dehydroquinate dehydratase/shikimate:NADP oxidoreductase [Solanum
            lycopersicum] gi|3169883|gb|AAC17991.1| dehydroquinate
            dehydratase/shikimate:NADP oxidoreductase [Solanum
            lycopersicum] gi|3169888|gb|AAC17993.1| dehydroquinate
            dehydratase/shikimate:NADP oxidoreductase [Solanum
            lycopersicum]
          Length = 545

 Score =  662 bits (1708), Expect = 0.0
 Identities = 338/482 (70%), Positives = 374/482 (77%), Gaps = 19/482 (3%)
 Frame = +3

Query: 3    PVEDVQSLIKQCPLPTLFSYR-------------------PTWEGGQYDGDEKSRLNVLL 125
            P  D+ +LIKQCPLPTLF+Y                    PTWEGGQY GDEKSRL+ L 
Sbjct: 63   PRPDIDTLIKQCPLPTLFTYSYVLGVGQGILLIRYYKGIGPTWEGGQYAGDEKSRLDALR 122

Query: 126  YVMESGADYIDVELKAVEEFNNLMRGKKPAKCKVIVSSHNYQYTPSAEDLGNLVAASIAS 305
              ME GADYIDVELKA+ EFNN + G K AKCK+IVSSHNY+ TPSAEDLGNLVA   AS
Sbjct: 123  LAMELGADYIDVELKAIGEFNNALHGNKSAKCKLIVSSHNYESTPSAEDLGNLVARIQAS 182

Query: 306  GADIVKISTTALDITDVARVFQITVNSQAPIIAMVMGERGLMSRILCPKFGGYLTFGALD 485
            GADIVK +TTA DITDVARVFQITV+SQ PIIAMVMGE+GLMSRILCPKFGGYLTFG L+
Sbjct: 183  GADIVKFATTAQDITDVARVFQITVHSQVPIIAMVMGEKGLMSRILCPKFGGYLTFGTLE 242

Query: 486  SGIVSAPGQPTIADLLNFYNFRQIGPDTKIFGIIGKPVSHSKSPLLYNEGFKKVGFNGIY 665
             G VSAPGQPT+ DLLN YNFRQ+GPDTKIFGIIGKPVSHSKSPLLYNE F+ VGFNG++
Sbjct: 243  VGKVSAPGQPTVEDLLNLYNFRQLGPDTKIFGIIGKPVSHSKSPLLYNESFRSVGFNGVF 302

Query: 666  VHLLVDDVAKFFQTYSSADFSGFSCTIPHKESALKCCDEVDSVAKSIGAVNCIIRRNNGK 845
            +HLLVDD+A FF+TYSS DF+GFSCTIPHKE+AL CC E+D  AK+IGAVNCIIRR +GK
Sbjct: 303  MHLLVDDIANFFRTYSSLDFAGFSCTIPHKEAALDCCAEIDPTAKAIGAVNCIIRRPDGK 362

Query: 846  LFGCNTDYVGAISAIEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXR 1025
            LFGCNTDY+GAISAIE+                                          R
Sbjct: 363  LFGCNTDYIGAISAIEE--GLQGSQPSISGSPLAGKLFVVIGAGGAGKAIAYGAKEKGAR 420

Query: 1026 VVIANRTYERAKELADTIGAQALSLSELNNFQPENHMLLANTTSIGMQPNIDDTPISKEA 1205
            VVIANRTYERA+ELA  +GA+ALSL EL+NF PEN M+LANTTSIGMQP +DDTPISKEA
Sbjct: 421  VVIANRTYERARELAIVVGAEALSLDELSNFHPENDMILANTTSIGMQPKVDDTPISKEA 480

Query: 1206 LKAYELVFDAIYTPKITRLLREADECGAKIVSGVEMFIGQAYEQYERFTGLPAPKELFKK 1385
            LK Y LVFDA+YTPKITRLLREA E GAKIV+GVEMFIGQAYEQYERFTGLPAPKELFK 
Sbjct: 481  LKHYSLVFDAVYTPKITRLLREAQESGAKIVTGVEMFIGQAYEQYERFTGLPAPKELFKN 540

Query: 1386 VM 1391
            +M
Sbjct: 541  IM 542


>emb|CBI26126.3| unnamed protein product [Vitis vinifera]
          Length = 495

 Score =  654 bits (1687), Expect = 0.0
 Identities = 326/462 (70%), Positives = 370/462 (80%), Gaps = 1/462 (0%)
 Frame = +3

Query: 3    PVEDVQSLIKQCPLPTLFSYRPTWEGGQYDGDEKSRLNVLLYVMESGADYIDVELKAVEE 182
            P +D++ LI++CPLPTLF+YRP WEGGQY+GDE SR + L   ME GADY+D+ELK   E
Sbjct: 28   PRQDLEVLIRKCPLPTLFTYRPKWEGGQYEGDENSRRDALRLAMELGADYVDIELKVAHE 87

Query: 183  FNNLMRGKKPAKCKVIVSSHNYQYTPSAEDLGNLVAASIASGADIVKISTTALDITDVAR 362
            F N + G+KP K KVIVSSHNYQ TPS EDLGNLV +  A+GADIVKI+TTAL+ITDVAR
Sbjct: 88   FINSIHGRKPEKFKVIVSSHNYQNTPSVEDLGNLVVSIQATGADIVKIATTALEITDVAR 147

Query: 363  VFQITVNSQAPIIAMVMGERGLMSRILCPKFGGYLTFGALDSGIVSAPGQPTIADLLNFY 542
            +FQITV+SQ P+I +VMGERGL+SRILCPKF GYLTFG+L+ GIVSAPGQPTI DLLN Y
Sbjct: 148  IFQITVHSQVPVIGLVMGERGLISRILCPKFSGYLTFGSLEPGIVSAPGQPTIKDLLNLY 207

Query: 543  NFRQIGPDTKIFGIIGKPVSHSKSPLLYNEGFKKVGFNGIYVHLLVDDVAKFFQTYSSAD 722
            NFRQ+GPDTK+FG+IGKPVSHSKSP LYNE FK VGFNG+YVHLLVDD+AKFF TYS+AD
Sbjct: 208  NFRQLGPDTKVFGVIGKPVSHSKSPHLYNEAFKSVGFNGVYVHLLVDDIAKFFHTYSAAD 267

Query: 723  FSGFSCTIPHKESALKCCDEVDSVAKSIGAVNCIIRR-NNGKLFGCNTDYVGAISAIEDX 899
            F+GFSCTIPHKE+ALKCCDEV  VAKSIGAVNCIIRR ++GKLFG NTDYVGAISAIED 
Sbjct: 268  FAGFSCTIPHKEAALKCCDEVSPVAKSIGAVNCIIRRPSDGKLFGYNTDYVGAISAIEDG 327

Query: 900  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVVIANRTYERAKELADTI 1079
                                                     RVVIANRTY RA+ELAD +
Sbjct: 328  LRDLHKISSTSGSPLAGKLFVVIGAGGAGKALAYGAKEKGARVVIANRTYARARELADAV 387

Query: 1080 GAQALSLSELNNFQPENHMLLANTTSIGMQPNIDDTPISKEALKAYELVFDAIYTPKITR 1259
            G  ALSL++LNNF PEN M+LANTTSIGMQP +D+TPISK ALK Y LVFDAIYTPKITR
Sbjct: 388  GGDALSLADLNNFHPENGMILANTTSIGMQPKVDETPISKHALKYYSLVFDAIYTPKITR 447

Query: 1260 LLREADECGAKIVSGVEMFIGQAYEQYERFTGLPAPKELFKK 1385
            LLREA E GA IV+G+EMFIGQAYEQ+ERFTGLPAPKELFK+
Sbjct: 448  LLREAQESGATIVTGLEMFIGQAYEQFERFTGLPAPKELFKQ 489


>ref|XP_002277395.2| PREDICTED: bifunctional 3-dehydroquinate dehydratase/shikimate
            dehydrogenase, chloroplastic-like [Vitis vinifera]
          Length = 522

 Score =  649 bits (1673), Expect = 0.0
 Identities = 326/465 (70%), Positives = 370/465 (79%), Gaps = 4/465 (0%)
 Frame = +3

Query: 3    PVEDVQSLIKQCPLPTLFSYRPTWEGGQYDGDEKSRLNVLLYVMESGADYIDVELKAVEE 182
            P +D++ LI++CPLPTLF+YRP WEGGQY+GDE SR + L   ME GADY+D+ELK   E
Sbjct: 52   PRQDLEVLIRKCPLPTLFTYRPKWEGGQYEGDENSRRDALRLAMELGADYVDIELKVAHE 111

Query: 183  FNNLMRGKKPAKCKVIVSSHNYQYTPSAEDLGNLVAASIASGADIVKISTTALDITDVAR 362
            F N + G+KP K KVIVSSHNYQ TPS EDLGNLV +  A+GADIVKI+TTAL+ITDVAR
Sbjct: 112  FINSIHGRKPEKFKVIVSSHNYQNTPSVEDLGNLVVSIQATGADIVKIATTALEITDVAR 171

Query: 363  VFQITVNSQA---PIIAMVMGERGLMSRILCPKFGGYLTFGALDSGIVSAPGQPTIADLL 533
            +FQITV+SQ    P+I +VMGERGL+SRILCPKF GYLTFG+L+ GIVSAPGQPTI DLL
Sbjct: 172  IFQITVHSQVSSVPVIGLVMGERGLISRILCPKFSGYLTFGSLEPGIVSAPGQPTIKDLL 231

Query: 534  NFYNFRQIGPDTKIFGIIGKPVSHSKSPLLYNEGFKKVGFNGIYVHLLVDDVAKFFQTYS 713
            N YNFRQ+GPDTK+FG+IGKPVSHSKSP LYNE FK VGFNG+YVHLLVDD+AKFF TYS
Sbjct: 232  NLYNFRQLGPDTKVFGVIGKPVSHSKSPHLYNEAFKSVGFNGVYVHLLVDDIAKFFHTYS 291

Query: 714  SADFSGFSCTIPHKESALKCCDEVDSVAKSIGAVNCIIRR-NNGKLFGCNTDYVGAISAI 890
            +ADF+GFSCTIPHKE+ALKCCDEV  VAKSIGAVNCIIRR ++GKLFG NTDYVGAISAI
Sbjct: 292  AADFAGFSCTIPHKEAALKCCDEVSPVAKSIGAVNCIIRRPSDGKLFGYNTDYVGAISAI 351

Query: 891  EDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVVIANRTYERAKELA 1070
            ED                                          RVVIANRTY RA+ELA
Sbjct: 352  EDGLRDLHKISSTSGSPLAGKLFVVIGAGGAGKALAYGAKEKGARVVIANRTYARARELA 411

Query: 1071 DTIGAQALSLSELNNFQPENHMLLANTTSIGMQPNIDDTPISKEALKAYELVFDAIYTPK 1250
            D +G  ALSL++LNNF PEN M+LANTTSIGMQP +D+TPISK ALK Y LVFDAIYTPK
Sbjct: 412  DAVGGDALSLADLNNFHPENGMILANTTSIGMQPKVDETPISKHALKYYSLVFDAIYTPK 471

Query: 1251 ITRLLREADECGAKIVSGVEMFIGQAYEQYERFTGLPAPKELFKK 1385
            ITRLLREA E GA IV+G+EMFIGQAYEQ+ERFTGLPAPKELFK+
Sbjct: 472  ITRLLREAQESGATIVTGLEMFIGQAYEQFERFTGLPAPKELFKQ 516


>ref|XP_002314474.1| dehydroquinate dehydratase/ shikimate dehydrogenase [Populus
            trichocarpa] gi|222863514|gb|EEF00645.1| dehydroquinate
            dehydratase/ shikimate dehydrogenase [Populus
            trichocarpa]
          Length = 538

 Score =  644 bits (1662), Expect = 0.0
 Identities = 321/464 (69%), Positives = 368/464 (79%), Gaps = 1/464 (0%)
 Frame = +3

Query: 3    PVEDVQSLIKQCPLPTLFSYRPTWEGGQYDGDEKSRLNVLLYVMESGADYIDVELKAVEE 182
            P  D+++LI   PLPTLF+YRP WEGGQY+GDEK RL+ L   ME GADYIDVELK   E
Sbjct: 72   PNSDIKTLILHSPLPTLFTYRPMWEGGQYNGDEKPRLDALRLAMELGADYIDVELKVAHE 131

Query: 183  FNNLMRGKKPAKCKVIVSSHNYQYTPSAEDLGNLVAASIASGADIVKISTTALDITDVAR 362
            FN L+RG KP KCK+IVSSHNY+ TPS E+LGNLVA   A+GADIVKI+TTALDI+DVAR
Sbjct: 132  FNELLRGNKPGKCKLIVSSHNYENTPSVEELGNLVARIQAAGADIVKIATTALDISDVAR 191

Query: 363  VFQITVNSQAPIIAMVMGERGLMSRILCPKFGGYLTFGALDSGIVSAPGQPTIADLLNFY 542
            +FQITV+SQ PII +VMGERGL+SRILC KFGGYLTFG L+SG+VSAPGQPTI DLL+ Y
Sbjct: 192  IFQITVHSQVPIIGLVMGERGLISRILCAKFGGYLTFGTLESGVVSAPGQPTIKDLLDLY 251

Query: 543  NFRQIGPDTKIFGIIGKPVSHSKSPLLYNEGFKKVGFNGIYVHLLVDDVAKFFQTYSSAD 722
            NFR IGPDTK+FGIIGKPV HSKSP+L+NE FK VG NG+YVHLLVDD+A+F QTYSS D
Sbjct: 252  NFRLIGPDTKVFGIIGKPVGHSKSPVLFNEAFKSVGINGVYVHLLVDDIARFLQTYSSTD 311

Query: 723  FSGFSCTIPHKESALKCCDEVDSVAKSIGAVNCIIRR-NNGKLFGCNTDYVGAISAIEDX 899
            F+GFSCTIPHKE A KCCDEV  VAKSIGAVNCIIRR N+GKLFG NTDYVGAISAIE+ 
Sbjct: 312  FAGFSCTIPHKEDAAKCCDEVHPVAKSIGAVNCIIRRQNDGKLFGYNTDYVGAISAIEEG 371

Query: 900  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVVIANRTYERAKELADTI 1079
                                                     RVVIANRTYERAK LAD I
Sbjct: 372  LRASQNVSNTVGSPLAGKLFVVIGAGGAGKALAYGAKEKGARVVIANRTYERAKVLADII 431

Query: 1080 GAQALSLSELNNFQPENHMLLANTTSIGMQPNIDDTPISKEALKAYELVFDAIYTPKITR 1259
            G  A++L++L NF PE+ M+LANTTSIGMQP +D+TP+SK AL++Y LVFDA+YTPKITR
Sbjct: 432  GGDAITLADLENFHPEDGMILANTTSIGMQPKVDETPVSKNALRSYSLVFDAVYTPKITR 491

Query: 1260 LLREADECGAKIVSGVEMFIGQAYEQYERFTGLPAPKELFKKVM 1391
            LLREA+E GAKIV+G+EMFIGQAYEQ+ERFT LPAPKELF+K+M
Sbjct: 492  LLREAEESGAKIVTGLEMFIGQAYEQFERFTELPAPKELFQKIM 535


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